Functional clusters

Information

  • Type Gene Ontology
  • Description jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyon Bd1 3 CH_bdi_218 3 13 0.0000912294
Cenchrus purpureus GWHAORA00000011 3 CH_cpu_205 5 20 0.0000000016415
Cenchrus purpureus GWHAORA00000004 3 CH_cpu_265 4 8 0.0000000300345
Miscanthus sinensis Chr02 3 CH_msi_350 3 11 0.0000563965
Miscanthus sinensis Chr01 3 CH_msi_351 3 11 0.0000563965
Panicum hallii Chr09 3 CH_pha_109 4 13 0.0000000294345
Sorghum bicolor Chr01 3 CH_sbi_119 4 13 0.0000000302894
Setaria italica scaffold_9 3 CH_sit_140 4 12 0.0000000203094
Setaria viridis Chr_09 3 CH_svi_153 4 19 0.000000115451
Brachypodium distachyon Bd1 4 CH_bdi_218 3 13 0.0000912294
Cenchrus purpureus GWHAORA00000011 4 CH_cpu_205 5 20 0.0000000016415
Cenchrus purpureus GWHAORA00000004 4 CH_cpu_265 4 8 0.0000000300345
Miscanthus sinensis Chr02 4 CH_msi_350 3 11 0.0000563965
Miscanthus sinensis Chr01 4 CH_msi_351 3 11 0.0000563965
Panicum hallii Chr09 4 CH_pha_109 4 13 0.0000000294345
Sorghum bicolor Chr01 4 CH_sbi_119 4 13 0.0000000302894
Setaria italica scaffold_9 4 CH_sit_140 4 12 0.0000000203094
Setaria viridis Chr_09 4 CH_svi_153 4 19 0.000000115451

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001