Functional clusters

Information

  • Type Gene Ontology
  • Description isoprenoid biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr3 3 CH_ath_162 6 12 0.0000000335992
Sequoiadendron giganteum chr3 3 CH_sgi_636 6 8 0.000000145533
Setaria viridis Chr_06 3 CH_svi_161 7 22 0.000000184127
Arabidopsis thaliana Chr3 4 CH_ath_162 6 12 0.0000000335992
Sequoiadendron giganteum chr3 4 CH_sgi_636 6 8 0.000000145533
Setaria viridis Chr_06 4 CH_svi_161 7 22 0.000000184127

Available child term results

Ontology identifier Description Number of clusters
GO:0006715 farnesol biosynthetic process 2
GO:0009686 gibberellin biosynthetic process 8
GO:0009688 abscisic acid biosynthetic process 6
GO:0010116 positive regulation of abscisic acid biosynthetic process 8
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 2
GO:0010323 negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 2
GO:0010371 regulation of gibberellin biosynthetic process 8
GO:0010373 negative regulation of gibberellin biosynthetic process 2
GO:0016102 diterpenoid biosynthetic process 44
GO:0016104 triterpenoid biosynthetic process 2
GO:0016106 sesquiterpenoid biosynthetic process 2
GO:0016114 terpenoid biosynthetic process 8
GO:0019408 dolichol biosynthetic process 2
GO:0019745 pentacyclic triterpenoid biosynthetic process 2
GO:0051762 sesquiterpene biosynthetic process 6
GO:0090359 negative regulation of abscisic acid biosynthetic process 10
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 2
GO:1901601 strigolactone biosynthetic process 8
GO:1904143 positive regulation of carotenoid biosynthetic process 2
GO:1904964 positive regulation of phytol biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001