Functional clusters

Information

  • Type Gene Ontology
  • Description terpenoid biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Oryza alta GWHAZTO00000014 3 CH_oal_416 4 11 0.0000291076
Oryza sativa ssp. indica Chr2 3 CH_osaindica_31 8 16 0.0000000000000471104
Oryza sativa Kitaake Chr2 3 CH_osak_52 8 15 0.0000000000000605144
Oryza sativa ssp. japonica chr02 3 CH_osa_10 10 16 3.12053e-20
Oryza alta GWHAZTO00000014 4 CH_oal_416 4 11 0.0000291076
Oryza sativa ssp. indica Chr2 4 CH_osaindica_31 8 16 0.0000000000000471104
Oryza sativa Kitaake Chr2 4 CH_osak_52 8 15 0.0000000000000605144
Oryza sativa ssp. japonica chr02 4 CH_osa_10 10 16 3.12053e-20

Available child term results

Ontology identifier Description Number of clusters
GO:0006715 farnesol biosynthetic process 2
GO:0009686 gibberellin biosynthetic process 8
GO:0009688 abscisic acid biosynthetic process 6
GO:0010116 positive regulation of abscisic acid biosynthetic process 8
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 2
GO:0010371 regulation of gibberellin biosynthetic process 8
GO:0010373 negative regulation of gibberellin biosynthetic process 2
GO:0016102 diterpenoid biosynthetic process 44
GO:0016104 triterpenoid biosynthetic process 2
GO:0016106 sesquiterpenoid biosynthetic process 2
GO:0019745 pentacyclic triterpenoid biosynthetic process 2
GO:0090359 negative regulation of abscisic acid biosynthetic process 10
GO:1901601 strigolactone biosynthetic process 8
GO:1904143 positive regulation of carotenoid biosynthetic process 2
GO:1904964 positive regulation of phytol biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001