Functional clusters

Information

  • Type MapMan
  • Description Enzyme classification.EC_4 lyases

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000002 1 CH_cpu_852 3 3 0.000669711
Digitaria exilis Dexi_CM05836_chr06A 1 CH_dex_302 4 5 0.00000443943
Miscanthus sinensis Chr04 1 CH_msi_396 3 3 0.000109329
Miscanthus sinensis Chr03 1 CH_msi_76 5 5 0.000000000148952
Secale cereale GWHASIY00000002 1 CH_sce_385 6 70 0.0000110797
Saccharum spontaneum Chr6A 1 CH_ssp_266 6 26 0.000000280012
Saccharum spontaneum Chr2A 1 CH_ssp_955 3 3 0.000334794
Setaria viridis Chr_06 1 CH_svi_376 5 51 0.000191877
Triticum turgidum chr5A 1 CH_ttu_523 3 3 0.00012501
Triticum turgidum chr5B 1 CH_ttu_524 3 3 0.00012501
Zoysia japonica ssp. nagirizaki Zjn_sc00003.1 1 CH_zjn_55 6 55 0.0000015754
Cenchrus purpureus GWHAORA00000002 2 CH_cpu_852 3 3 0.000669711
Digitaria exilis Dexi_CM05836_chr06A 2 CH_dex_302 4 5 0.00000443943
Miscanthus sinensis Chr04 2 CH_msi_396 3 3 0.000109329
Miscanthus sinensis Chr03 2 CH_msi_76 5 5 0.000000000148952
Secale cereale GWHASIY00000002 2 CH_sce_385 6 70 0.0000110797
Saccharum spontaneum Chr6A 2 CH_ssp_266 6 26 0.000000280012
Saccharum spontaneum Chr2A 2 CH_ssp_955 3 3 0.000334794
Setaria viridis Chr_06 2 CH_svi_376 5 51 0.000191877
Triticum turgidum chr5A 2 CH_ttu_523 3 3 0.00012501
Triticum turgidum chr5B 2 CH_ttu_524 3 3 0.00012501
Zoysia japonica ssp. nagirizaki Zjn_sc00003.1 2 CH_zjn_55 6 55 0.0000015754

Available child term results

Ontology identifier Description Number of clusters
50.4.1 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase 2
50.4.2 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase 50
50.4.3 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 100
50.4.4 Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001