Functional clusters
Information
- Type MapMan
- Description Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 1 | CH_aag_111 | 4 | 23 | 0.0000812896 |
| Ananas comosus | LG21 | 1 | CH_aco_41 | 3 | 3 | 0.00000701797 |
| Allium sativum | chr3 | 1 | CH_asa_129 | 4 | 4 | 0.00000000478537 |
| Allium sativum | chr7_1 | 1 | CH_asa_226 | 4 | 8 | 0.00000033441 |
| Digitaria exilis | Dexi_CM05836_chr08A | 1 | CH_dex_270 | 5 | 22 | 0.0000015727 |
| Digitaria exilis | Dexi_CM05836_chr07A | 1 | CH_dex_539 | 3 | 4 | 0.000253262 |
| Digitaria exilis | Dexi_CM05836_chr06B | 1 | CH_dex_680 | 3 | 5 | 0.000632677 |
| Hordeum vulgare | chrUn | 1 | CH_hvu_236 | 3 | 4 | 0.0000131397 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_260 | 3 | 5 | 0.0000328395 |
| Musa acuminata | chr07 | 1 | CH_mac_20 | 6 | 14 | 0.00000000000536671 |
| Magnolia biondii | Chr17 | 1 | CH_mbi_25 | 10 | 42 | 1.25331e-16 |
| Magnolia biondii | Chr14 | 1 | CH_mbi_370 | 3 | 4 | 0.0000651856 |
| Magnolia biondii | Chr01 | 1 | CH_mbi_622 | 3 | 5 | 0.000650733 |
| Magnolia biondii | Chr18 | 1 | CH_mbi_87 | 8 | 65 | 0.00000000043406 |
| Oryza alta | GWHAZTO00000015 | 1 | CH_oal_97 | 5 | 16 | 0.00000000403465 |
| Phyllostachys edulis | hic_scaffold_15 | 1 | CH_ped_296 | 3 | 5 | 0.0000647013 |
| Phyllostachys edulis | hic_scaffold_23 | 1 | CH_ped_299 | 4 | 29 | 0.0000713837 |
| Sorghum bicolor | Chr05 | 1 | CH_sbi_182 | 3 | 3 | 0.00000085191 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_1268 | 3 | 3 | 0.000390642 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_472 | 6 | 16 | 0.0000000263347 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_653 | 5 | 15 | 0.00000488567 |
| Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_188 | 4 | 10 | 0.000000615743 |
| Selaginella moellendorffii | scaffold_1 | 1 | CH_smo_99 | 3 | 5 | 0.000126569 |
| Triticum dicoccoides | 6B | 1 | CH_tdi_50 | 7 | 15 | 0.0000000000000217198 |
| Vanilla planifolia | CM028161.1 | 1 | CH_vpl_382 | 3 | 7 | 0.000836044 |
| Anthoceros agrestis | Sc2ySwM_368 | 2 | CH_aag_111 | 4 | 23 | 0.0000812896 |
| Ananas comosus | LG21 | 2 | CH_aco_41 | 3 | 3 | 0.00000701797 |
| Allium sativum | chr3 | 2 | CH_asa_129 | 4 | 4 | 0.00000000478537 |
| Allium sativum | chr7_1 | 2 | CH_asa_226 | 4 | 8 | 0.00000033441 |
| Digitaria exilis | Dexi_CM05836_chr08A | 2 | CH_dex_270 | 5 | 22 | 0.0000015727 |
| Digitaria exilis | Dexi_CM05836_chr07A | 2 | CH_dex_539 | 3 | 4 | 0.000253262 |
| Digitaria exilis | Dexi_CM05836_chr06B | 2 | CH_dex_680 | 3 | 5 | 0.000632677 |
| Hordeum vulgare | chrUn | 2 | CH_hvu_236 | 3 | 4 | 0.0000131397 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_260 | 3 | 5 | 0.0000328395 |
| Musa acuminata | chr07 | 2 | CH_mac_20 | 6 | 14 | 0.00000000000536671 |
| Magnolia biondii | Chr17 | 2 | CH_mbi_25 | 10 | 42 | 1.25331e-16 |
| Magnolia biondii | Chr14 | 2 | CH_mbi_370 | 3 | 4 | 0.0000651856 |
| Magnolia biondii | Chr01 | 2 | CH_mbi_622 | 3 | 5 | 0.000650733 |
| Magnolia biondii | Chr18 | 2 | CH_mbi_87 | 8 | 65 | 0.00000000043406 |
| Oryza alta | GWHAZTO00000015 | 2 | CH_oal_97 | 5 | 16 | 0.00000000403465 |
| Phyllostachys edulis | hic_scaffold_15 | 2 | CH_ped_296 | 3 | 5 | 0.0000647013 |
| Phyllostachys edulis | hic_scaffold_23 | 2 | CH_ped_299 | 4 | 29 | 0.0000713837 |
| Sorghum bicolor | Chr05 | 2 | CH_sbi_182 | 3 | 3 | 0.00000085191 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_1268 | 3 | 3 | 0.000390642 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_472 | 6 | 16 | 0.0000000263347 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_653 | 5 | 15 | 0.00000488567 |
| Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_188 | 4 | 10 | 0.000000615743 |
| Selaginella moellendorffii | scaffold_1 | 2 | CH_smo_99 | 3 | 5 | 0.000126569 |
| Triticum dicoccoides | 6B | 2 | CH_tdi_50 | 7 | 15 | 0.0000000000000217198 |
| Vanilla planifolia | CM028161.1 | 2 | CH_vpl_382 | 3 | 7 | 0.000836044 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |