Functional clusters

Information

  • Type MapMan
  • Description Lipid metabolism.sphingolipid biosynthesis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Spirodela polyrhiza pseudo15 1 CH_spo_55 5 7 0.0000000290015
Spirodela polyrhiza pseudo15 2 CH_spo_55 5 7 0.0000000290015

Available child term results

Ontology identifier Description Number of clusters
5.4.1.1 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB1 2
5.4.1.2 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB2 28
5.4.1.3 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.small regulatory subunit ssSPT 18
5.4.10 Lipid metabolism.sphingolipid biosynthesis.delta-8 sphingolipid desaturase (SLD) 6
5.4.11 Lipid metabolism.sphingolipid biosynthesis.sphingolipid fatty acid 2-hydroxylase (FAH) 6
5.4.12 Lipid metabolism.sphingolipid biosynthesis.ceramide glucosyltransferase (GCS) 2
5.4.13 Lipid metabolism.sphingolipid biosynthesis.ceramide kinase 8
5.4.14.3 Lipid metabolism.sphingolipid biosynthesis.glycosylinositol phosphorylceramide (GIPC) biosynthesis.GIPC mannosyltransferase (GMT1) 2
5.4.14.4 Lipid metabolism.sphingolipid biosynthesis.glycosylinositol phosphorylceramide (GIPC) biosynthesis.GIPC N-acetylglucosamine transferase (GINT1) 6
5.4.2 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase regulator (ORM) 2
5.4.3 Lipid metabolism.sphingolipid biosynthesis.ketosphinganine reductase (TSC10) 6
5.4.4 Lipid metabolism.sphingolipid biosynthesis.sphingobase hydroxylase (SBH) 24
5.4.5 Lipid metabolism.sphingolipid biosynthesis.delta-4 sphingolipid desaturase (DSD) 4
5.4.6 Lipid metabolism.sphingolipid biosynthesis.ceramide synthase (LOH) 14
5.4.7 Lipid metabolism.sphingolipid biosynthesis.sphingosine transfer protein 2
5.4.8 Lipid metabolism.sphingolipid biosynthesis.sphingoid long-chain base kinase 4
5.4.9 Lipid metabolism.sphingolipid biosynthesis.sphingoid long-chain base phosphate phosphatase 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001