Functional clusters

Information

  • Type InterPro
  • Description Porin, eukaryotic type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_335 3 3 0.00000041748
Amborella trichopoda AmTr_v1.0_scaffold00004 5 CH_atr_625 2 2 0.000794407
Brassica carinata ChrB01 5 CH_bca_983 3 4 0.00000630482
Capsicum annuum PGAv.1.6.scaffold206 5 CH_can_287 4 10 0.0000000744895
Coffea canephora chr11 5 CH_ccan_715 2 7 0.000894346
Magnolia biondii Chr11 5 CH_mbi_1059 3 33 0.000350175
Pisum sativum chr1LG6 5 CH_psa_356 3 4 0.00000914033
Sequoiadendron giganteum chr3 5 CH_sgi_2533 2 2 0.000730727
Sequoiadendron giganteum chr10 5 CH_sgi_2534 2 2 0.000730727
Acer truncatum chr5 6 CH_acertr_335 3 3 0.00000041748
Amborella trichopoda AmTr_v1.0_scaffold00004 6 CH_atr_625 2 2 0.000794407
Brassica carinata ChrB01 6 CH_bca_983 3 4 0.00000630482
Capsicum annuum PGAv.1.6.scaffold206 6 CH_can_287 4 10 0.0000000744895
Coffea canephora chr11 6 CH_ccan_715 2 7 0.000894346
Magnolia biondii Chr11 6 CH_mbi_1059 3 33 0.000350175
Pisum sativum chr1LG6 6 CH_psa_356 3 4 0.00000914033
Sequoiadendron giganteum chr3 6 CH_sgi_2533 2 2 0.000730727
Sequoiadendron giganteum chr10 6 CH_sgi_2534 2 2 0.000730727

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001