Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 0.0e+00 1867.0 902 100.0
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 0.0e+00 1795.4 924 94.9
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 0.0e+00 1620.1 853 92.6
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 0.0e+00 1589.3 928 83.8
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 0.0e+00 1523.8 937 80.6
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 0.0e+00 1460.7 911 78.4
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 0.0e+00 1443.7 896 79.4
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 0.0e+00 1184.5 937 60.4
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 0.0e+00 1156.4 915 61.1
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 0.0e+00 1147.1 910 60.1
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 0.0e+00 1145.2 948 60.0
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 0.0e+00 1144.4 918 60.3
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 0.0e+00 1136.7 921 59.8
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 0.0e+00 1136.3 923 59.6
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 0.0e+00 1134.0 925 59.4
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 0.0e+00 1132.5 941 59.6
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 0.0e+00 1131.7 944 58.2
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 0.0e+00 1127.1 851 64.6
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 0.0e+00 1126.7 926 59.6
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 0.0e+00 1124.0 939 58.6
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 0.0e+00 1122.8 940 58.6
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 0.0e+00 1118.2 940 58.2
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 0.0e+00 1117.8 943 58.1
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 0.0e+00 1112.4 977 56.8
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 0.0e+00 1110.5 930 58.5
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 0.0e+00 1108.6 958 57.3
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 0.0e+00 1098.6 936 58.2
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 0.0e+00 1091.3 923 57.2
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 0.0e+00 1088.9 935 56.4
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 0.0e+00 1087.4 922 56.7
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 0.0e+00 1076.2 937 57.8
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 6.2e-312 1073.9 937 57.6
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 6.2e-312 1073.9 901 57.2
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 9.3e-311 1070.1 893 58.1
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 2.1e-310 1068.9 901 56.9
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 2.7e-310 1068.5 821 63.5
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 3.0e-309 1065.1 827 62.2
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 2.6e-308 1062.0 881 59.0
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 6.3e-307 1057.4 932 56.8
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 5.9e-305 1050.8 931 55.6
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 1.7e-304 1049.3 927 57.6
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 1.6e-302 1042.7 866 58.4
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 3.0e-301 1038.5 930 54.5
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 3.1e-298 1028.5 932 54.9
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 3.1e-298 1028.5 934 55.8
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 4.4e-292 1008.1 889 55.5
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 5.7e-292 1007.7 814 58.2
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 2.2e-291 1005.7 785 61.5
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 8.6e-288 993.8 910 54.1
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 4.3e-287 991.5 912 53.6
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 1.6e-286 989.6 909 54.5
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 2.8e-286 988.8 911 53.2
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 4.0e-285 984.9 910 53.8
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 6.8e-285 984.2 873 56.9
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 8.9e-285 983.8 910 54.8
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 2.6e-284 982.2 895 54.1
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 7.5e-284 980.7 875 56.5
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 1.3e-283 979.9 892 54.6
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 3.7e-283 978.4 710 64.6
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 1.7e-280 969.5 893 54.4
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 6.6e-280 967.6 914 53.2
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 1.1e-279 966.8 925 53.1
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 2.5e-279 965.7 909 52.5
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 9.5e-279 963.8 891 54.4
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 2.8e-278 962.2 926 51.9
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 1.5e-276 956.4 897 52.8
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 5.8e-276 954.5 929 52.9
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 1.7e-275 953.0 925 52.2
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 2.9e-275 952.2 907 52.6
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 7.0e-274 947.6 930 50.9
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 1.1e-271 940.3 915 51.0
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 5.6e-271 937.9 916 52.2
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 2.1e-270 936.0 916 52.1
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 1.3e-264 916.8 801 56.3
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 5.1e-264 914.8 889 52.2
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 2.0e-260 902.9 797 55.7
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 8.4e-259 897.5 813 54.1
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 8.4e-259 897.5 813 54.1
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 5.4e-258 894.8 721 60.2
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 6.6e-256 887.9 870 51.6
Gohir.A05G070000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.9e-250 869.8 711 59.4
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 1.4e-245 853.6 709 57.4
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 9.0e-245 850.9 872 50.6
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 5.4e-242 841.6 943 47.0
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 8.7e-240 834.3 935 46.5
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 2.8e-238 829.3 637 62.0
Gohir.A09G112300 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.1e-223 780.8 620 61.1
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 5.1e-216 755.4 814 48.8
CSS0019486 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 4.7e-193 679.1 489 65.2
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 8.8e-192 674.9 937 42.6
Phvul.002G034601 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 2.4e-189 666.8 650 50.5
Os01g0275900 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 4.1e-181 639.4 578 52.8
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 6.5e-179 632.1 973 37.2
Gohir.D05G073000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.2e-157 560.1 432 61.6
unitig_27.g25000 Utricularia gibba HOM05D006404 ORTHO05D008170 2.0e-156 557.4 502 56.4
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.2e-137 495.0 562 47.3
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 4.4e-135 486.5 468 53.8
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 3.3e-130 470.3 497 45.3
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 4.6e-116 423.3 845 32.3
Glyma.11G015367 Glycine max HOM05D006404 ORTHO05D008170 6.2e-113 412.9 381 53.0
PGSC0003DMG400035426 Solanum tuberosum HOM05D006404 ORTHO05D008170 1.3e-107 395.2 205 91.2
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 6.7e-107 392.9 397 53.1
HPP92_028182 Vanilla planifolia HOM05D006404 ORTHO05D008170 2.1e-100 371.3 301 57.5
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.1e-64 252.7 296 48.3
TAR633G2510 Trochodendron aralioides HOM05D006404 ORTHO05D008170 8.9e-59 233.0 242 51.2
PGSC0003DMG400025695 Solanum tuberosum HOM05D006404 ORTHO05D008170 5.9e-55 220.3 109 91.7
Os01g0275950 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 1.7e-54 218.8 268 44.8
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 2.9e-54 218.0 304 39.8
Duzib168G1560 Durio zibethinus HOM05D006404 ORTHO05D008170 5.0e-54 217.2 253 49.4
MBI19_g48146_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 6.1e-52 210.3 231 49.4
Lsat_1_v5_gn_5_69941 Lactuca sativa HOM05D006404 ORTHO05D008170 1.0e-30 139.8 134 56.7
Lsat_1_v5_gn_8_47480 Lactuca sativa HOM05D006404 ORTHO05D008170 2.3e-30 138.7 133 54.1
Lsat_1_v5_gn_4_119980 Lactuca sativa HOM05D006404 ORTHO05D008170 4.7e-28 131.0 122 54.9
HPP92_012439 Vanilla planifolia HOM05D006404 ORTHO05D008170 2.9e-25 121.7 210 34.8
PRCOL_00003209 Prasinoderma coloniale HOM05D006404 ORTHO05D008170 2.1e-23 115.5 812 21.6
Atru.chr3.2650 Acer truncatum HOM05D006404 ORTHO05D008170 1.5e-21 109.4 70 70.0
MELO3C030880.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.1e-16 93.2 97 49.5
Thecc.01G390500 Theobroma cacao HOM05D006404 ORTHO05D008170 6.0e-15 87.4 75 57.3
Atru.chr3.2651 Acer truncatum HOM05D006404 ORTHO05D008170 2.5e-13 82.0 62 54.8
MELO3C034790.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.1e-11 76.6 63 57.1
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 9.9e-10 70.1 41 73.2
MELO3C028471.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.3e-09 69.7 53 56.6
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 6.4e-09 67.4 84 48.8
MELO3C034469.2 Cucumis melo HOM05D006404 ORTHO05D003726 3.2e-08 65.1 61 49.2

Acer truncatum (3 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (5 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (3 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (4 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (4 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (3 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings