Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g024980 Solanum pennellii HOM05D011511 ORTHO05D000022 2.8e-128 461.8 215 100.0
PGSC0003DMG400029986 Solanum tuberosum HOM05D011511 ORTHO05D000022 1.5e-68 263.5 141 90.1
Nitab4.5_0000512g0090 Nicotiana tabacum HOM05D011511 ORTHO05D000022 1.3e-53 213.8 200 52.0
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.5e-41 171.4 216 40.7
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 5.4e-31 138.7 144 49.3
Nitab4.5_0008964g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-30 136.7 120 58.3
Nitab4.5_0003663g0030 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.3e-28 128.3 106 54.7
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 7.3e-28 128.3 213 34.7
Nitab4.5_0008471g0050 Nicotiana tabacum HOM05D011511 ORTHO05D000022 9.6e-28 127.9 135 51.1
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.2e-27 125.2 216 33.8
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-26 124.0 215 33.0
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.2e-26 122.1 216 31.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.2e-25 120.9 220 34.1
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 5.8e-25 118.6 214 32.7
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 5.8e-25 118.6 163 38.7
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 7.6e-25 118.2 216 31.5
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 9.9e-25 117.9 218 33.9
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 3.8e-24 115.9 88 52.3
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-23 114.0 213 33.3
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.2e-23 112.8 177 32.2
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-22 110.9 210 29.5
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 1.3e-21 107.5 212 31.1
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 1.7e-21 107.1 212 28.8
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-21 107.1 212 28.8
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.7e-21 107.1 217 29.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-21 106.3 179 34.1
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 6.6e-21 105.1 175 36.0
PGSC0003DMG400021434 Solanum tuberosum HOM05D001426 ORTHO05D000022 6.6e-21 105.1 207 30.0
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.6e-21 105.1 170 32.9
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 1.9e-20 103.6 173 31.8
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-20 103.6 218 31.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 3.3e-20 102.8 214 30.4
PGSC0003DMG400015911 Solanum tuberosum HOM05D000003 ORTHO05D001389 5.6e-20 102.1 208 29.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-19 100.9 213 29.1
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.8e-19 99.8 186 33.3
Cc00_g07050 Coffea canephora HOM05D000003 ORTHO05D000004 6.2e-19 98.6 173 35.3
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 8.1e-19 98.2 144 41.0
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 8.1e-19 98.2 209 28.7
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 1.8e-18 97.1 167 32.9
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-18 97.1 136 36.8
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 5.3e-18 95.5 189 32.8
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 5.3e-18 95.5 159 34.0
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 6.9e-18 95.1 178 32.0
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 9.0e-18 94.7 178 33.7
Sabra01G0000100 Salix brachista HOM05D000003 ORTHO05D000004 3.4e-17 92.8 168 32.7
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 3.4e-17 92.8 155 31.0
Nitab4.5_0000459g0130 Nicotiana tabacum HOM05D011511 ORTHO05D000022 9.9e-17 91.3 131 38.9
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.9e-17 91.3 171 35.1
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 9.9e-17 91.3 178 32.0
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 9.9e-17 91.3 198 29.3
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 1.7e-16 90.5 209 27.3
Nitab4.5_0005934g0070 Nicotiana tabacum HOM05D011511 ORTHO05D000022 3.8e-16 89.4 62 58.1
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 3.8e-16 89.4 195 30.3
Thecc.02G366600 Theobroma cacao HOM05D000003 ORTHO05D000006 3.8e-16 89.4 150 32.7
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 1.9e-15 87.0 136 34.6
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.1e-14 83.6 165 32.7
Nitab4.5_0010722g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.7e-14 83.2 213 28.6
Thecc.04G000200 Theobroma cacao HOM05D000155 ORTHO05D000022 3.5e-14 82.8 167 31.7
Peaxi162Scf00024g02012 Petunia axillaris HOM05D000155 ORTHO05D000022 4.6e-14 82.4 116 38.8
CiPaw.15G160400 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.9e-13 79.3 164 28.0
RcHm_v2.0_Chr6g0301391 Rosa chinensis HOM05D000003 ORTHO05D000004 3.9e-13 79.3 178 32.0
CAN.G520.11 Capsicum annuum HOM05D000741 ORTHO05D000506 1.5e-12 77.4 85 37.6
Nitab4.5_0000417g0090 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.3e-12 76.3 190 28.4
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-12 76.3 140 32.9
MBI02_g40095_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 9.6e-12 74.7 121 38.8
MBI16_g06664_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.3e-11 74.3 207 27.1
Sabra11G0000200 Salix brachista HOM05D000155 ORTHO05D000022 1.3e-11 74.3 134 31.3
CAN.G1135.5 Capsicum annuum HOM05D011511 ORTHO05D000022 2.1e-11 73.6 121 31.4
RcHm_v2.0_Chr4g0404571 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-11 73.2 188 31.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 4.8e-11 72.4 233 26.6
Nitab4.5_0000754g0070 Nicotiana tabacum HOM05D009916 ORTHO05D000022 4.8e-11 72.4 107 37.4
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 4.8e-11 72.4 148 28.4
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 6.2e-11 72.0 180 30.0
MBI07_g06431_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D000022 2.4e-10 70.1 172 29.7
Oeu052667.1 Olea europaea HOM05D000024 ORTHO05D000006 2.4e-10 70.1 188 29.8
Nitab4.5_0001771g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.1e-10 69.7 165 27.9
Nitab4.5_0007662g0020 Nicotiana tabacum HOM05D000801 ORTHO05D001389 3.1e-10 69.7 138 31.9
MBI01_g02758_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.3e-10 68.9 159 30.2
MBI18_g33703_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.0e-10 68.2 159 29.6
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 1.2e-09 67.8 151 29.8
Nitab4.5_0000335g0260 Nicotiana tabacum HOM05D000003 ORTHO05D000004 1.2e-09 67.8 100 30.0
PSO017G0119 Papaver somniferum HOM05D000003 ORTHO05D006738 1.2e-09 67.8 175 30.9
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 1.2e-09 67.8 225 25.8
Nitab4.5_0000320g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-09 67.4 154 30.5
PGSC0003DMG400043208 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.6e-09 66.6 91 33.0
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-09 66.2 217 24.4
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.5e-09 65.9 83 36.1
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.8e-09 65.5 62 48.4
Nitab4.5_0000031g0460 Nicotiana tabacum HOM05D009916 ORTHO05D000022 7.6e-09 65.1 96 36.5
Glyma.06G010150 Glycine max HOM05D000003 ORTHO05D000004 1.3e-08 64.3 175 28.0
MBI10_g04436_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 64.3 127 31.5
PGSC0003DMG402018748 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.3e-08 64.3 113 31.0
ECA240G2728 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.7e-08 63.9 176 27.3
Nitab4.5_0000251g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.2e-08 63.5 147 27.9
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 2.2e-08 63.5 109 31.2
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 4.9e-08 62.4 97 35.1
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-08 62.0 74 36.5
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 8.4e-08 61.6 148 30.4
MBI14_g12128_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.4e-08 61.6 214 24.3
RcHm_v2.0_Chr7g0200601 Rosa chinensis HOM05D000003 ORTHO05D000651 1.1e-07 61.2 164 31.1
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-07 60.8 174 29.3
Sopen03g025440 Solanum pennellii HOM05D000024 ORTHO05D000022 1.4e-07 60.8 67 38.8
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 1.9e-07 60.5 160 31.2
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 1.9e-07 60.5 160 31.2
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 1.9e-07 60.5 164 31.1
Sabra07G0094000 Salix brachista HOM05D000003 ORTHO05D000283 1.9e-07 60.5 180 28.9
CAN.G2076.4 Capsicum annuum HOM05D000295 ORTHO05D006296 2.4e-07 60.1 112 33.0
SGA_v2.0_scaffold61G21206 Striga asiatica HOM05D000003 ORTHO05D000006 2.4e-07 60.1 134 32.8
TAR400G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 2.4e-07 60.1 129 27.1
MBI15_g37533_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 3.2e-07 59.7 163 27.0
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 3.2e-07 59.7 188 28.7
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 4.2e-07 59.3 176 29.5
PGSC0003DMG400007590 Solanum tuberosum HOM05D001426 ORTHO05D001389 4.2e-07 59.3 117 31.6
Nitab4.5_0010696g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.1e-07 58.5 70 47.1
PGSC0003DMG400033664 Solanum tuberosum HOM05D001426 ORTHO05D001389 9.3e-07 58.2 122 30.3
Nitab4.5_0006265g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-06 57.8 90 27.8
PSO675G0391 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 162 26.5
PSO675G6925 Papaver somniferum HOM05D000003 ORTHO05D000651 1.2e-06 57.8 162 26.5
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 1.2e-06 57.8 78 34.6
PGSC0003DMG400002381 Solanum tuberosum HOM05D000003 ORTHO05D006296 1.2e-06 57.8 74 29.7
SGA_v2.0_scaffold32G13212 Striga asiatica HOM05D044428 ORTHO05D000022 1.6e-06 57.4 153 31.4
Nitab4.5_0000239g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.7e-06 56.6 112 25.9
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 2.7e-06 56.6 161 31.1
MBI01_g02771_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.5e-06 56.2 96 33.3
Nitab4.5_0000681g0110 Nicotiana tabacum HOM05D065652 ORTHO05D001389 4.6e-06 55.8 61 42.6
CAN.G426.23 Capsicum annuum HOM05D011511 ORTHO05D000022 6.0e-06 55.5 83 30.1
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 6.0e-06 55.5 149 28.2
Nitab4.5_0001027g0140 Nicotiana tabacum HOM05D001426 ORTHO05D000022 6.0e-06 55.5 90 33.3
Nitab4.5_0005232g0010 Nicotiana tabacum HOM05D009916 ORTHO05D014164 6.0e-06 55.5 105 29.5
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 6.0e-06 55.5 163 33.1
Atru.chr13.2390 Acer truncatum HOM05D000003 ORTHO05D000004 7.9e-06 55.1 147 27.9
Aqoxy7G02314 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.9e-06 55.1 172 23.3
PGSC0003DMG400010787 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.9e-06 55.1 149 30.2

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (5 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (0 genes)
Glycine max (1 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (10 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (27 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (3 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (6 genes)
Salix brachista (4 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (31 genes)
Solanum tuberosum (19 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (4 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings