Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Sopen11g005030	Solanum pennellii	HOM05D008176	ORTHO05D004477	1.6e-71	272.7	141	100.0
Solyc11g010250.1	Solanum lycopersicum	HOM05D008176	ORTHO05D004477	8.4e-65	250.4	142	94.4
PGSC0003DMG400016149	Solanum tuberosum	HOM05D008176	ORTHO05D004477	2.4e-64	248.8	141	92.9
Peaxi162Scf00237g00201	Petunia axillaris	HOM05D008176	ORTHO05D004477	1.1e-56	223.4	141	80.1
Nitab4.5_0003888g0010	Nicotiana tabacum	HOM05D013332	ORTHO05D004477	1.2e-34	150.2	102	79.4
Nitab4.5_0012818g0010	Nicotiana tabacum	HOM05D008176	ORTHO05D004477	2.6e-34	149.1	138	63.8
Nitab4.5_0000241g0190	Nicotiana tabacum	HOM05D008176	ORTHO05D004477	7.6e-34	147.5	102	78.4
Sopen05g029890	Solanum pennellii	HOM05D008176	ORTHO05D004477	1.0e-33	147.1	141	61.0
Nitab4.5_0000128g0240	Nicotiana tabacum	HOM05D008176	ORTHO05D004477	6.5e-33	144.4	129	65.1
PGSC0003DMG400016792	Solanum tuberosum	HOM05D008176	ORTHO05D004477	2.2e-28	129.4	145	57.9
PGSC0003DMG400016791	Solanum tuberosum	HOM05D008176	ORTHO05D004477	1.4e-22	110.2	135	51.1
Sopen05g029880	Solanum pennellii	HOM05D008176	ORTHO05D004477	2.2e-20	102.8	127	52.0
TAR625G0942	Trochodendron aralioides	HOM05D008046	ORTHO05D004477	1.7e-17	93.2	132	48.5
Nn5g30002	Nelumbo nucifera	HOM05D008176	ORTHO05D004477	1.6e-15	86.7	141	44.0
QL06p048130	Quercus lobata	HOM05D008176	ORTHO05D004477	1.6e-15	86.7	139	44.6
TWI12G0518	Tripterygium wilfordii	HOM05D008046	ORTHO05D004477	2.7e-15	85.9	145	42.8
CiPaw.03G145800	Carya illinoinensis	HOM05D008176	ORTHO05D004477	1.0e-14	84.0	149	45.0
Dinv13234	Davidia involucrata	HOM05D008176	ORTHO05D004477	1.4e-14	83.6	147	42.2
Gohir.A02G129700	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	4.4e-13	78.6	141	39.0
RcHm_v2.0_Chr2g0112381	Rosa chinensis	HOM05D013332	ORTHO05D004477	4.4e-13	78.6	161	42.2
MSTRG.23362	Avicennia marina	HOM05D008176	ORTHO05D004477	5.7e-13	78.2	146	43.8
CiPaw.04G103600	Carya illinoinensis	HOM05D008176	ORTHO05D004477	5.7e-13	78.2	143	42.0
Manes.12G129900	Manihot esculenta	HOM05D008176	ORTHO05D004477	7.4e-13	77.8	147	40.8
Gohir.D03G040500	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	9.7e-13	77.4	141	38.3
Gorai.003G041400	Gossypium raimondii	HOM05D008176	ORTHO05D004477	1.3e-12	77.0	141	38.3
TAR628G0226	Trochodendron aralioides	HOM05D008046	ORTHO05D004477	2.2e-12	76.3	147	41.5
Potri.005G072000	Populus trichocarpa	HOM05D008176	ORTHO05D004477	2.8e-12	75.9	140	39.3
Duzib187G0825	Durio zibethinus	HOM05D008176	ORTHO05D004477	3.7e-12	75.5	150	40.0
Duzib264G0386	Durio zibethinus	HOM05D008176	ORTHO05D004477	4.8e-12	75.1	145	44.1
SalBow3G2508	Salvia bowleyana	HOM05D029310	ORTHO05D004477	8.2e-12	74.3	147	39.5
SalBow3G3284	Salvia bowleyana	HOM05D029310	ORTHO05D004477	8.2e-12	74.3	147	39.5
SGA_v2.0_scaffold108G30894	Striga asiatica	HOM05D008176	ORTHO05D004477	1.8e-11	73.2	159	39.6
Ca_08988_v3	Cicer arietinum L.	HOM05D008176	ORTHO05D004477	2.4e-11	72.8	137	40.9
FAN23G0907	Fragaria x ananassa	HOM05D013332	ORTHO05D004477	2.4e-11	72.8	159	37.7
TAR381G0533	Trochodendron aralioides	HOM05D008046	ORTHO05D004477	2.4e-11	72.8	141	39.0
TWI53G0271	Tripterygium wilfordii	HOM05D008176	ORTHO05D004477	4.1e-11	72.0	145	35.2
Thecc.01G095600	Theobroma cacao	HOM05D008176	ORTHO05D004477	7.0e-11	71.2	143	40.6
VMungo1383G1959	Vigna mungo	HOM05D008176	ORTHO05D004477	7.0e-11	71.2	141	37.6
GSVIVG01009081001	Vitis vinifera	HOM05D008046	ORTHO05D004477	7.0e-11	71.2	147	36.1
COL.COLO4_27295	Corchorus olitorius	HOM05D008176	ORTHO05D004477	9.1e-11	70.9	141	40.4
FAN28G1274	Fragaria x ananassa	HOM05D013332	ORTHO05D004477	9.1e-11	70.9	159	37.7
Nn1g05455	Nelumbo nucifera	HOM05D008046	ORTHO05D004477	1.2e-10	70.5	143	36.4
Lj4g0008028	Lotus japonicus	HOM05D008176	ORTHO05D004477	1.6e-10	70.1	136	43.4
Atru.chr3.1344	Acer truncatum	HOM05D008176	ORTHO05D004477	2.0e-10	69.7	139	41.7
DCAR_014203	Daucus carota	HOM05D013332	ORTHO05D004477	3.5e-10	68.9	145	37.9
FAN26G3011	Fragaria x ananassa	HOM05D013332	ORTHO05D004477	3.5e-10	68.9	159	37.1
Aqoxy6G00716	Aquilegia oxysepala	HOM05D008046	ORTHO05D004477	4.5e-10	68.6	135	37.0
Cc10_g06700	Coffea canephora	HOM05D008046	ORTHO05D004477	7.7e-10	67.8	154	35.1
FAN19G2695	Fragaria x ananassa	HOM05D013332	ORTHO05D004477	7.7e-10	67.8	159	36.5
Sc26g0000200	Simmondsia chinensis	HOM05D013332	ORTHO05D004477	1.3e-09	67.0	144	38.9
Haze_24851	Corylus avellana	HOM05D008176	ORTHO05D004477	2.9e-09	65.9	139	41.0
Gohir.A05G265833	Gossypium hirsutum	HOM05D008046	ORTHO05D004477	2.9e-09	65.9	145	39.3
Manes.13G096700	Manihot esculenta	HOM05D008176	ORTHO05D004477	2.9e-09	65.9	142	35.9
Glyma.18G015000	Glycine max	HOM05D008176	ORTHO05D004477	3.8e-09	65.5	124	41.1
Glyma.08G133100	Glycine max	HOM05D008176	ORTHO05D004477	6.5e-09	64.7	136	36.8
Gorai.007G059700	Gossypium raimondii	HOM05D008176	ORTHO05D004477	6.5e-09	64.7	147	36.7
Lsat_1_v5_gn_1_3180	Lactuca sativa	HOM05D008046	ORTHO05D004477	6.5e-09	64.7	141	36.9
Cfa002600	Carpinus fangiana	HOM05D008176	ORTHO05D004477	1.1e-08	63.9	133	36.8
Gohir.A11G051100	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	1.1e-08	63.9	147	36.7
Hma1.2p1_0019F.1_g013800	Hydrangea macrophylla	HOM05D013332	ORTHO05D004477	1.1e-08	63.9	156	32.7
QL02p002440	Quercus lobata	HOM05D008046	ORTHO05D004477	1.1e-08	63.9	145	37.9
CSS0041686	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	1.5e-08	63.5	139	33.8
FvH4_1g20240	Fragaria vesca	HOM05D013332	ORTHO05D004477	1.5e-08	63.5	159	35.2
Psat7g056440	Pisum sativum	HOM05D008176	ORTHO05D004477	1.5e-08	63.5	139	38.1
Sabra07G0080300	Salix brachista	HOM05D008176	ORTHO05D004477	1.5e-08	63.5	137	33.6
CSS0034401	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	2.5e-08	62.8	141	34.8
CSS0039341	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	2.5e-08	62.8	141	34.8
CSS0046665	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	3.2e-08	62.4	139	33.8
Glyma.11G242100	Glycine max	HOM05D008176	ORTHO05D004477	3.2e-08	62.4	130	38.5
Ciclev10026640m.g	Citrus clementina	HOM05D008176	ORTHO05D004477	4.2e-08	62.0	140	35.7
Gohir.A01G132600	Gossypium hirsutum	HOM05D008046	ORTHO05D004477	4.2e-08	62.0	126	37.3
Thecc.08G102400	Theobroma cacao	HOM05D008046	ORTHO05D004477	4.2e-08	62.0	135	35.6
TWI74G1149	Tripterygium wilfordii	HOM05D008176	ORTHO05D004477	4.2e-08	62.0	144	32.6
Hma1.2p1_1148F.1_g261600	Hydrangea macrophylla	HOM05D008046	ORTHO05D004477	7.2e-08	61.2	125	36.8
Solyc04g074680.1	Solanum lycopersicum	HOM05D010872	ORTHO05D004477	7.2e-08	61.2	143	34.3
CDE03G0262	Ceratophyllum demersum	HOM05D001201	ORTHO05D004477	1.2e-07	60.5	131	33.6
Potri.002G100500	Populus trichocarpa	HOM05D008046	ORTHO05D004477	1.2e-07	60.5	154	35.1
CSS0015684	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	1.6e-07	60.1	137	33.6
Phvul.001G253900	Phaseolus vulgaris	HOM05D008176	ORTHO05D004477	1.6e-07	60.1	125	40.0
Potri.005G161700	Populus trichocarpa	HOM05D008046	ORTHO05D004477	1.6e-07	60.1	136	36.0
CSS0043643	Camellia sinensis var. sinensis	HOM05D008046	ORTHO05D004477	2.1e-07	59.7	137	32.8
Gohir.A11G204400	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	2.1e-07	59.7	132	36.4
Cpa.g.sc55.74	Carica papaya	HOM05D008176	ORTHO05D004477	2.7e-07	59.3	145	35.9
Gohir.D11G054500	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	2.7e-07	59.3	152	35.5
Lsat_1_v5_gn_6_104300	Lactuca sativa	HOM05D008046	ORTHO05D004477	3.6e-07	58.9	121	37.2
Sc23g0000380	Simmondsia chinensis	HOM05D008046	ORTHO05D004477	3.6e-07	58.9	142	36.6
SGA_v2.0_scaffold115G32090	Striga asiatica	HOM05D010872	ORTHO05D004477	3.6e-07	58.9	112	43.8
TPR.G16006	Trifolium pratense	HOM05D008176	ORTHO05D004477	3.6e-07	58.9	143	35.7
Gorai.007G235100	Gossypium raimondii	HOM05D008176	ORTHO05D004477	4.7e-07	58.5	132	36.4
Gohir.D11G218800	Gossypium hirsutum	HOM05D008176	ORTHO05D004477	6.1e-07	58.2	131	36.6
Oeu048965.1	Olea europaea	HOM05D008046	ORTHO05D004477	6.1e-07	58.2	131	36.6
Glyma.05G175800	Glycine max	HOM05D008176	ORTHO05D004477	8.0e-07	57.8	136	34.6
TPR.G6203	Trifolium pratense	HOM05D008176	ORTHO05D004477	8.0e-07	57.8	137	38.0
Carub.0008s2618	Capsella rubella	HOM05D010563	ORTHO05D012591	1.0e-06	57.4	139	36.7
Gohir.D05G267950	Gossypium hirsutum	HOM05D008046	ORTHO05D004477	1.0e-06	57.4	148	38.5
CDE05G1898	Ceratophyllum demersum	HOM05D000157	ORTHO05D000691	1.4e-06	57.0	124	37.9
Psat5g090880	Pisum sativum	HOM05D008176	ORTHO05D004477	1.4e-06	57.0	148	33.8
COL.COLO4_12009	Corchorus olitorius	HOM05D008046	ORTHO05D004477	2.3e-06	56.2	143	31.5
Potri.007G097000	Populus trichocarpa	HOM05D008176	ORTHO05D004477	2.3e-06	56.2	129	37.2
Gorai.009G280100	Gossypium raimondii	HOM05D008046	ORTHO05D004477	3.0e-06	55.8	154	38.3
Medtr8g089920	Medicago truncatula	HOM05D008176	ORTHO05D004477	3.0e-06	55.8	131	40.5
Eucgr.B00040	Eucalyptus grandis	HOM05D008046	ORTHO05D004477	4.0e-06	55.5	143	35.7
Medtr3g086830	Medicago truncatula	HOM05D008176	ORTHO05D004477	4.0e-06	55.5	136	32.4
Duzib116G0877	Durio zibethinus	HOM05D008046	ORTHO05D004477	5.2e-06	55.1	132	33.3
Sopen04g029650	Solanum pennellii	HOM05D010872	ORTHO05D013672	6.7e-06	54.7	36	63.9
CiPaw.16G033000	Carya illinoinensis	HOM05D008046	ORTHO05D004477	8.8e-06	54.3	149	30.9
PSO700G0164	Papaver somniferum	HOM05D055938	ORTHO05D050202	8.8e-06	54.3	146	33.6
SGA_v2.0_scaffold45G17135	Striga asiatica	HOM05D010872	ORTHO05D004477	8.8e-06	54.3	144	33.3

External Sequences (optional)

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MSA algorithm

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Interactive Phylogenetics Module

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