Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 9.6e-126 453.4 207 100.0
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.4e-122 440.7 207 96.1
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.3e-110 401.4 207 87.0
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.1e-109 399.1 207 87.9
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 1.2e-96 356.7 207 78.3
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.1e-96 355.9 207 80.7
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.9e-95 351.7 207 78.3
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.1e-92 343.6 189 81.5
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 6.7e-87 324.3 147 99.3
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 7.4e-86 320.9 202 72.8
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.3e-85 320.1 202 73.3
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-82 309.7 147 94.6
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.2e-82 309.3 147 93.9
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 4.2e-81 305.1 204 69.1
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 6.7e-79 297.7 228 61.4
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.7e-78 293.9 203 66.0
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-77 293.5 203 66.0
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.2e-77 290.8 203 65.0
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.5e-75 285.0 148 84.5
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 2.2e-74 282.7 170 70.6
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.2e-73 278.5 181 67.4
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 5.3e-68 261.5 148 77.7
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.7e-56 222.6 195 55.9
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.5e-54 214.5 148 66.2
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 9.8e-54 214.2 244 47.1
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 9.8e-54 214.2 181 53.6
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 2.9e-50 202.6 203 51.7
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 2.5e-49 199.5 228 48.7
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.2e-45 186.4 225 45.3
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.1e-44 182.2 219 40.6
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.1e-40 168.3 215 41.4
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 7.5e-38 161.4 140 56.4
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 2.0e-35 153.3 215 41.9
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 7.8e-35 151.4 129 55.0
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.7e-34 150.2 152 50.7
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 1.7e-34 150.2 141 54.6
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.4e-28 129.8 151 49.0
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.2e-28 129.4 150 48.7
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 2.3e-26 123.2 128 47.7
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-24 117.5 77 62.3
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 4.7e-24 115.5 132 42.4
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.4e-15 87.4 126 43.7
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.8e-15 87.0 54 70.4
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 5.2e-15 85.5 54 68.5
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.2e-15 85.5 60 65.0
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 8.9e-15 84.7 56 67.9
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.0e-14 83.6 56 66.1
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 5.8e-14 82.0 55 65.5
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 1.3e-13 80.9 51 70.6
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 2.2e-13 80.1 53 64.2
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 3.8e-13 79.3 54 61.1
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 4.9e-13 79.0 51 68.6
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.4e-13 78.2 81 43.2
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.4e-12 77.4 56 60.7
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-12 77.4 56 60.7
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.4e-12 77.4 56 60.7
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 2.4e-12 76.6 55 63.6
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 4.2e-12 75.9 56 57.1
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 4.6e-11 72.4 56 57.1
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 4.6e-11 72.4 56 57.1
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 6.6e-10 68.6 51 58.8
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 1.1e-09 67.8 41 73.2
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 5.6e-09 65.5 161 31.1
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 7.3e-09 65.1 56 51.8
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 4.7e-08 62.4 51 56.9
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.8e-07 60.5 60 48.3
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 3.1e-07 59.7 55 52.7
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 4.0e-07 59.3 63 49.2
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 4.0e-07 59.3 52 51.9
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 5.3e-07 58.9 55 50.9
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 9.0e-07 58.2 55 52.7
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 1.2e-06 57.8 64 48.4
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 1.2e-06 57.8 57 50.9
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 1.2e-06 57.8 55 52.7
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 2.0e-06 57.0 50 54.0
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 2.0e-06 57.0 51 58.8
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 2.0e-06 57.0 52 50.0
SalBow7G2761 Salvia bowleyana HOM05D007628 ORTHO05D007342 2.0e-06 57.0 51 54.9
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 2.0e-06 57.0 52 50.0
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 4.4e-06 55.8 64 46.9
FvH4_5g32180 Fragaria vesca HOM05D007628 ORTHO05D007342 7.6e-06 55.1 54 55.6
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 7.6e-06 55.1 53 54.7
FvH4_5g32140 Fragaria vesca HOM05D007628 ORTHO05D007342 9.9e-06 54.7 53 52.8
FAN18G2608 Fragaria x ananassa HOM05D007628 ORTHO05D007342 9.9e-06 54.7 53 52.8
RcHm_v2.0_Chr7g0228201 Rosa chinensis HOM05D007628 ORTHO05D007342 9.9e-06 54.7 53 56.6
RcHm_v2.0_Chr7g0228231 Rosa chinensis HOM05D007628 ORTHO05D007342 9.9e-06 54.7 53 56.6
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 9.9e-06 54.7 52 48.1

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (9 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (2 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (2 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (8 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (9 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (15 genes)
Solanum pennellii (11 genes)
Solanum tuberosum (14 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

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