Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 5.5e-157 557.8 314 100.0
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 1.1e-149 533.5 344 90.1
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 1.4e-99 367.1 358 67.0
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.1e-85 320.9 313 61.3
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.6e-84 317.0 315 61.6
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 2.6e-74 283.1 342 57.3
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 3.4e-74 282.7 329 60.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 4.9e-73 278.9 312 53.5
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 9.2e-72 274.6 354 54.8
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.2e-71 274.2 326 57.7
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 1.2e-71 274.2 327 59.3
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 3.0e-70 269.6 350 54.6
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 3.9e-70 269.2 352 52.8
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 5.1e-70 268.9 338 55.6
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.1e-69 267.7 365 52.9
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.9e-69 266.9 321 53.6
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 2.5e-69 266.5 361 52.6
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 5.6e-69 265.4 338 54.1
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.2e-68 264.2 347 51.9
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 3.6e-68 262.7 357 54.6
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.7e-68 262.3 340 56.5
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 6.2e-68 261.9 340 55.3
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.1e-67 261.2 381 51.2
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.8e-67 260.4 376 50.5
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 4.0e-67 259.2 354 52.8
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.5e-66 257.3 343 53.9
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 5.8e-66 255.4 342 52.9
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 7.6e-66 255.0 344 53.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.7e-65 253.8 370 52.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.7e-65 253.8 336 55.4
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 2.2e-65 253.4 319 55.5
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 2.2e-65 253.4 334 52.4
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 4.9e-65 252.3 377 50.7
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 6.4e-65 251.9 325 55.1
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 6.4e-65 251.9 373 49.9
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.9e-64 250.4 361 51.8
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.2e-64 249.6 355 52.4
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.2e-64 249.6 355 52.4
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 5.4e-64 248.8 337 53.7
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 7.1e-64 248.4 353 51.0
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 1.6e-63 247.3 367 52.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.6e-63 247.3 335 53.1
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.5e-63 246.1 317 55.8
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.5e-63 246.1 317 55.8
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 4.6e-63 245.7 368 49.2
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 4.6e-63 245.7 337 52.2
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.0e-62 244.6 324 54.6
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.5e-61 240.7 332 53.6
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.5e-61 240.0 355 51.5
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 4.3e-61 239.2 340 52.6
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 1.3e-60 237.7 343 48.4
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.1e-60 235.0 345 51.0
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.1e-59 234.6 350 50.9
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.1e-59 234.6 350 50.9
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.1e-59 234.6 353 49.0
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.4e-59 234.2 378 49.5
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.1e-59 233.0 347 49.0
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 4.0e-59 232.6 326 55.8
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 5.3e-59 232.3 356 50.6
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 9.0e-59 231.5 342 51.2
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 2.0e-58 230.3 367 48.5
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.4e-58 229.2 345 50.4
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 4.4e-58 229.2 326 53.4
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.3e-57 227.6 333 52.9
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.7e-57 227.3 364 45.6
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.9e-57 226.5 377 48.3
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 2.9e-57 226.5 351 51.0
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 4.9e-57 225.7 359 46.2
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 4.9e-57 225.7 347 49.6
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 8.4e-57 224.9 317 54.9
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 8.4e-57 224.9 361 50.1
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.9e-56 223.8 381 47.5
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 5.4e-56 222.2 335 49.9
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 7.1e-56 221.9 376 47.1
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 9.3e-56 221.5 368 48.9
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 3.5e-55 219.5 377 46.7
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 4.6e-55 219.2 339 49.3
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.5e-53 213.4 316 51.9
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 4.3e-53 212.6 363 49.0
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 7.4e-53 211.8 393 42.7
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.8e-51 207.2 379 44.3
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 9.0e-51 204.9 401 41.1
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 3.5e-47 193.0 323 47.4
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 6.0e-47 192.2 267 50.9
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 7.9e-47 191.8 316 44.9
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.0e-46 191.4 317 43.8
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 8.7e-46 188.3 303 49.8
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 4.3e-45 186.0 285 48.8
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.4e-43 180.3 393 39.7
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 1.2e-42 177.9 355 36.6
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 3.4e-42 176.4 318 46.5
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 2.5e-40 170.2 377 41.9
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-37 161.4 149 59.7
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 3.3e-37 159.8 159 56.0
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 4.1e-35 152.9 198 47.5
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.6e-34 150.2 288 41.3
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.3e-33 147.9 283 47.0
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.1e-32 144.8 248 50.0
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.9e-32 144.1 126 58.7
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 4.2e-32 142.9 93 78.5
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 3.6e-31 139.8 494 31.6
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.0e-30 138.3 142 51.4
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 1.4e-27 127.9 116 55.2
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 6.9e-27 125.6 121 55.4
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 5.0e-25 119.4 397 29.5
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 1.2e-23 114.8 211 50.2
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 1.0e-22 111.7 252 32.1
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 8.8e-22 108.6 196 37.8
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 5.7e-21 105.9 154 45.5
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 1.8e-19 100.9 97 52.6
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.1e-19 99.8 79 73.4
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 1.5e-18 97.8 184 35.9
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 4.5e-18 96.3 118 55.9
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.3e-17 94.7 77 71.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-15 88.2 97 47.4
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 6.1e-15 85.9 93 48.4
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-11 75.1 115 40.9
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 2.6e-10 70.5 101 40.6
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.6e-10 70.5 101 40.6
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 7.7e-10 68.9 101 39.6
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-09 67.4 102 41.2
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.5e-09 65.9 74 48.6
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-08 65.1 101 36.6
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-07 61.6 74 45.9
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 1.6e-07 61.2 68 48.5
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 2.7e-07 60.5 40 65.0
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-06 58.5 101 39.6
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-06 57.0 101 37.6
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 4.0e-06 56.6 101 39.6
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-06 55.8 96 40.6
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 8.8e-06 55.5 101 37.6
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 8.8e-06 55.5 101 37.6

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (21 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings