Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g065410.1 Solanum lycopersicum HOM05D055009 ORTHO05D030625 1.3e-38 162.5 81 100.0
Solyc12g070156.2 Solanum lycopersicum HOM05D001883 ORTHO05D030625 1.5e-18 95.9 101 54.5
Solyc02g030317.1 Solanum lycopersicum HOM05D055009 ORTHO05D030625 5.4e-16 87.4 86 58.1
Solyc12g014615.1 Solanum lycopersicum HOM05D000594 ORTHO05D010385 7.3e-13 77.0 45 80.0
Nitab4.5_0001031g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.4e-10 67.8 82 46.3
Nitab4.5_0002304g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.5e-10 67.0 87 44.8
Nitab4.5_0005376g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.2e-09 65.5 89 42.7
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 4.9e-09 64.3 36 88.9
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.1e-08 61.2 113 37.2
Solyc10g050460.1 Solanum lycopersicum HOM05D006353 ORTHO05D030625 5.4e-08 60.8 35 85.7
Nitab4.5_0005277g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.7e-07 58.5 67 46.3
Nitab4.5_0002550g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.0e-06 56.6 115 33.9
Nitab4.5_0001357g0190 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.7e-06 55.8 86 40.7
Nitab4.5_0000165g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.3e-06 55.5 110 33.6
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.3e-06 55.5 113 34.5
Peaxi162Scf00780g00416 Petunia axillaris HOM05D001883 ORTHO05D002184 3.0e-06 55.1 101 35.6
Nitab4.5_0001238g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.6e-06 53.9 104 35.6
Nitab4.5_0002380g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.6e-06 53.5 97 34.0

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (11 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (5 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings