Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Solyc11g050760.2	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	5.0e-60	234.2	114	100.0
Solyc00g500041.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	4.1e-54	214.5	112	93.8
Solyc00g500086.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	2.7e-53	211.8	113	91.2
Solyc00g500123.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	2.7e-53	211.8	113	91.2
Solyc00g500193.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	2.7e-53	211.8	113	91.2
Peaxi162Scf00030g02119	Petunia axillaris	HOM05D000533	ORTHO05D006151	5.9e-53	210.7	111	91.9
Peaxi162Scf00269g01411	Petunia axillaris	HOM05D000533	ORTHO05D006151	5.9e-53	210.7	111	91.9
CAN.G1045.10	Capsicum annuum	HOM05D000533	ORTHO05D002807	5.0e-52	207.6	111	91.0
CAN.G1298.18	Capsicum annuum	HOM05D000533	ORTHO05D002807	5.0e-52	207.6	111	91.0
CAN.G1526.1	Capsicum annuum	HOM05D000533	ORTHO05D002807	5.0e-52	207.6	111	91.0
Solyc11g021230.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	6.6e-52	207.2	111	90.1
PGR111G0022	Punica granatum	HOM05D000533	ORTHO05D002807	1.6e-50	202.6	113	86.7
Migut.D01249	Erythranthe guttata	HOM05D000533	ORTHO05D002807	6.2e-50	200.7	112	86.6
Lju5009P0T26	Lonicera japonica	HOM05D000533	ORTHO05D002807	5.2e-49	197.6	113	85.0
SalBow1G0006	Salvia bowleyana	HOM05D000533	ORTHO05D002807	8.9e-49	196.8	113	83.2
HanXRQChr00c0289g0573151	Helianthus annuus	HOM05D000533	ORTHO05D002807	1.2e-48	196.4	111	85.6
HanXRQChr09g0258481	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
HanXRQChr15g0465421	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
HanXRQChr15g0465471	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
HanXRQChr17g0569711	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
HanXRQChr17g0569761	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
HanXRQCPg0580331	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.2e-48	196.4	111	85.6
DCAR_032541	Daucus carota	HOM05D000533	ORTHO05D002807	3.4e-48	194.9	113	84.1
Gohir.D05G308833	Gossypium hirsutum	HOM05D000533	ORTHO05D002807	4.4e-48	194.5	107	85.0
EL10Ac1g02291	Beta vulgaris	HOM05D000533	ORTHO05D002807	5.8e-48	194.1	111	83.8
EL10As15g24098	Beta vulgaris	HOM05D000533	ORTHO05D002807	5.8e-48	194.1	111	83.8
MBI10_g47594_MAGBIO	Magnolia biondii	HOM05D000533	ORTHO05D001069	1.3e-47	193.0	113	83.2
Sed0004290	Sechium edule	HOM05D000533	ORTHO05D002807	4.9e-47	191.0	111	82.0
Medtr4g006100	Medicago truncatula	HOM05D000533	ORTHO05D001069	1.9e-46	189.1	109	84.4
Medtr7g021700	Medicago truncatula	HOM05D000533	ORTHO05D006151	1.9e-46	189.1	109	84.4
Psat7g150960	Pisum sativum	HOM05D000533	ORTHO05D001069	4.1e-46	188.0	109	83.5
ATCG01100	Arabidopsis thaliana	HOM05D000533	ORTHO05D002807	5.4e-46	187.6	105	83.8
BolC9t56913H	Brassica oleracea	HOM05D000533	ORTHO05D002807	5.4e-46	187.6	105	83.8
Medtr4g050810	Medicago truncatula	HOM05D000533	ORTHO05D006151	5.4e-46	187.6	108	84.3
C09p40310	Brassica napus	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC29t60509H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC29t60549H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC35t60689H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC35t60707H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC44t60825H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC47t61062H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BolSC49t61146H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BraSC103t45432Z	Brassica rapa	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
BraSC143t45657Z	Brassica rapa	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	105	83.8
Medtr6g042200	Medicago truncatula	HOM05D000533	ORTHO05D001069	9.2e-46	186.8	109	83.5
PSO548G0012	Papaver somniferum	HOM05D000533	ORTHO05D002807	9.2e-46	186.8	113	82.3
AL9U11959	Arabidopsis lyrata	HOM05D000533	ORTHO05D002807	6.0e-45	184.1	105	81.9
LjContig00318g0007609	Lotus japonicus	HOM05D000533	ORTHO05D002807	1.0e-44	183.3	109	81.7
LjContig00319g0005103	Lotus japonicus	HOM05D000533	ORTHO05D002807	1.0e-44	183.3	109	81.7
Sed0023589	Sechium edule	HOM05D000533	ORTHO05D002807	1.3e-44	183.0	110	77.3
Sed0023659	Sechium edule	HOM05D000533	ORTHO05D002807	1.3e-44	183.0	110	77.3
CARHR282470	Cardamine hirsuta	HOM05D000533	ORTHO05D002807	2.3e-44	182.2	105	82.9
arahy.Tifrunner.gnm1.ann1.RBM67I	Arachis hypogaea	HOM05D000533	ORTHO05D002807	1.5e-43	179.5	109	79.8
Gohir.A10G063750	Gossypium hirsutum	HOM05D000533	ORTHO05D002807	1.9e-43	179.1	99	84.8
FAN01G0230	Fragaria x ananassa	HOM05D000533	ORTHO05D002807	3.3e-43	178.3	111	78.4
arahy.Tifrunner.gnm1.ann1.U57TMC	Arachis hypogaea	HOM05D000533	ORTHO05D002807	4.3e-43	177.9	109	78.9
Gorai.009G395200	Gossypium raimondii	HOM05D000533	ORTHO05D002807	8.9e-41	170.2	95	86.3
arahy.Tifrunner.gnm1.ann1.CXW88U	Arachis hypogaea	HOM05D000533	ORTHO05D002807	1.5e-40	169.5	105	78.1
Nn1g07318	Nelumbo nucifera	HOM05D000533	ORTHO05D002807	5.8e-40	167.5	93	86.0
TPR.G31189	Trifolium pratense	HOM05D000533	ORTHO05D002807	1.3e-39	166.4	104	78.8
Solyc02g080275.1	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	6.4e-39	164.1	90	92.2
HanXRQChr00c0336g0573691	Helianthus annuus	HOM05D000533	ORTHO05D002807	3.2e-38	161.8	99	83.8
HanXRQChr02g0059741	Helianthus annuus	HOM05D000533	ORTHO05D001069	3.2e-38	161.8	99	83.8
Lsat_1_v5_gn_8_62921	Lactuca sativa	HOM05D000533	ORTHO05D002807	1.0e-36	156.8	91	84.6
MELO3C000179.2	Cucumis melo	HOM05D000533	ORTHO05D002807	3.3e-35	151.8	91	80.2
CsaV3_1G022940	Cucumis sativus L.	HOM05D000533	ORTHO05D002807	9.5e-35	150.2	85	84.7
MBI10_g47589_MAGBIO	Magnolia biondii	HOM05D000533	ORTHO05D001069	3.6e-34	148.3	113	66.4
Lsat_1_v5_gn_4_118121	Lactuca sativa	HOM05D000533	ORTHO05D002807	4.7e-34	147.9	111	65.8
BraSC58t46464Z	Brassica rapa	HOM05D000533	ORTHO05D002807	1.1e-33	146.7	109	68.8
Psat1g104920	Pisum sativum	HOM05D000533	ORTHO05D002807	1.5e-32	142.9	77	87.0
Sed0007463	Sechium edule	HOM05D000533	ORTHO05D002807	1.9e-30	136.0	110	60.9
Nn1g00560	Nelumbo nucifera	HOM05D000533	ORTHO05D002807	7.1e-30	134.0	73	87.7
BraSC138t45532Z	Brassica rapa	HOM05D000533	ORTHO05D002807	2.7e-29	132.1	82	76.8
Nitab4.5_0017884g0010	Nicotiana tabacum	HOM05D000533	ORTHO05D002807	1.0e-28	130.2	81	79.0
Eucgr.B03250	Eucalyptus grandis	HOM05D000533	ORTHO05D002807	4.3e-27	124.8	72	84.7
EL10As15g24139	Beta vulgaris	HOM05D000533	ORTHO05D002807	2.8e-26	122.1	102	63.7
Gohir.D11G334101	Gossypium hirsutum	HOM05D000533	ORTHO05D002807	2.8e-26	122.1	72	80.6
Gohir.1Z049702	Gossypium hirsutum	HOM05D000533	ORTHO05D002807	6.2e-26	120.9	74	78.4
Nitab4.5_0001313g0090	Nicotiana tabacum	HOM05D000533	ORTHO05D002807	1.1e-25	120.2	84	71.4
Solyc02g011790.2	Solanum lycopersicum	HOM05D000533	ORTHO05D002807	5.4e-22	107.8	109	56.0
SMO086G0018	Selaginella moellendorffii	HOM05D000533	ORTHO05D002807	9.3e-22	107.1	85	63.5
Medtr4g451555	Medicago truncatula	HOM05D000533	ORTHO05D002807	4.6e-21	104.8	71	74.6
Nitab4.5_0001783g0070	Nicotiana tabacum	HOM05D000216	ORTHO05D002807	7.8e-21	104.0	82	69.5
HanXRQChr01g0000271	Helianthus annuus	HOM05D000533	ORTHO05D001069	1.0e-20	103.6	56	85.7
BolC2t10599H	Brassica oleracea	HOM05D000533	ORTHO05D002807	1.3e-18	96.7	62	75.8
Glyma.18G155550	Glycine max	HOM05D000533	ORTHO05D002807	1.3e-18	96.7	64	78.1
arahy.Tifrunner.gnm1.ann1.F0S3GF	Arachis hypogaea	HOM05D000533	ORTHO05D002807	9.0e-17	90.5	61	73.8
Lalb_Chr07g0191801	Lupinus albus	HOM05D000533	ORTHO05D002807	1.5e-16	89.7	61	75.4
Migut.D01386	Erythranthe guttata	HOM05D000533	ORTHO05D002807	2.0e-16	89.4	41	95.1
HanXRQChr00c0504g0575311	Helianthus annuus	HOM05D000533	ORTHO05D006151	3.4e-16	88.6	83	61.4
Lsat_1_v5_gn_5_174020	Lactuca sativa	HOM05D000533	ORTHO05D002807	9.9e-16	87.0	60	68.3
CARHR060450	Cardamine hirsuta	HOM05D000533	ORTHO05D002807	1.3e-15	86.7	71	63.4
HanXRQChr00c0703g0576931	Helianthus annuus	HOM05D000533	ORTHO05D002807	2.9e-15	85.5	76	63.2
arahy.Tifrunner.gnm1.ann1.KIF45B	Arachis hypogaea	HOM05D000533	ORTHO05D002807	4.9e-15	84.7	42	83.3
COL.COLO4_02137	Corchorus olitorius	HOM05D000533	ORTHO05D002807	4.9e-15	84.7	101	41.6
arahy.Tifrunner.gnm1.ann1.9IC8RT	Arachis hypogaea	HOM05D000533	ORTHO05D002807	2.7e-13	79.0	47	76.6
EL10Ac6g14288	Beta vulgaris	HOM05D000533	ORTHO05D002807	8.7e-12	73.9	36	83.3
Nitab4.5_0001783g0140	Nicotiana tabacum	HOM05D000445	ORTHO05D000314	1.9e-11	72.8	46	78.3
Sabra10G0056200	Salix brachista	HOM05D000533	ORTHO05D001069	7.4e-11	70.9	107	43.9
BolSC37t60796H	Brassica oleracea	HOM05D000533	ORTHO05D002807	9.6e-11	70.5	30	96.7
Psat0s1160g0360	Pisum sativum	HOM05D000533	ORTHO05D006151	3.6e-10	68.6	51	66.7
Psat0s6989g0200	Pisum sativum	HOM05D000533	ORTHO05D006151	3.6e-10	68.6	51	66.7
Psat3g095000	Pisum sativum	HOM05D000533	ORTHO05D006151	3.6e-10	68.6	51	66.7
Psat6g140600	Pisum sativum	HOM05D000533	ORTHO05D006151	3.6e-10	68.6	51	66.7
CSS0023353	Camellia sinensis var. sinensis	HOM05D000533	ORTHO05D006151	1.1e-09	67.0	81	45.7
Gohir.D04G093016	Gossypium hirsutum	HOM05D000533	ORTHO05D002807	5.3e-09	64.7	94	44.7
Mapoly0013s0013	Marchantia polymorpha	HOM05D002965	ORTHO05D010183	7.1e-06	54.3	64	43.8

External Sequences (optional)

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MSA algorithm

Tree construction algorithm

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Interactive Phylogenetics Module

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