Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021210.2 Solanum lycopersicum HOM05D005034 ORTHO05D006234 2.5e-96 355.5 187 100.0
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.2e-71 273.5 176 84.1
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 7.9e-71 270.8 185 79.5
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-69 266.9 185 78.4
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 2.5e-64 249.2 197 70.6
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 9.4e-56 220.7 176 68.2
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 1.0e-54 217.2 178 68.5
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 1.4e-54 216.9 180 67.8
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-53 213.8 182 65.9
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.2e-53 213.8 182 65.9
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 2.6e-53 212.6 176 66.5
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 3.4e-53 212.2 176 64.8
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 3.4e-53 212.2 176 64.8
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 3.4e-53 212.2 178 64.6
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.3e-52 210.3 182 64.3
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 1.3e-52 210.3 176 61.9
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 3.7e-52 208.8 176 64.2
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 4.1e-51 205.3 178 67.4
RcHm_v2.0_CPg0502821 Rosa chinensis HOM05D005034 ORTHO05D006234 4.1e-51 205.3 145 76.6
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 1.7e-49 199.9 180 63.9
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 2.2e-49 199.5 185 60.5
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 2.2e-49 199.5 185 60.5
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 6.5e-49 198.0 166 65.7
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 1.9e-48 196.4 189 58.7
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 6.1e-47 191.4 167 62.9
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 1.0e-46 190.7 176 61.4
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 5.2e-46 188.3 183 61.2
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 6.8e-46 188.0 180 58.9
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 8.8e-46 187.6 176 58.5
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-45 186.4 186 57.0
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-45 185.7 186 57.0
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 4.4e-45 185.3 186 57.0
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 4.4e-45 185.3 186 57.0
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 1.3e-44 183.7 179 57.0
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 2.2e-44 183.0 184 56.5
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 2.8e-44 182.6 184 56.0
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 3.7e-44 182.2 185 56.8
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 4.9e-44 181.8 142 66.9
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.8e-43 179.9 182 59.3
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 4.5e-42 175.3 176 58.5
Nitab4.5_0000100g0130 Nicotiana tabacum HOM05D005034 ORTHO05D006234 3.8e-41 172.2 178 59.6
HanXRQChr08g0212001 Helianthus annuus HOM05D005034 ORTHO05D006234 6.1e-39 164.9 128 69.5
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 2.6e-37 159.5 105 76.2
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 3.4e-37 159.1 118 70.3
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 5.7e-37 158.3 144 61.1
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 5.7e-37 158.3 167 55.7
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 1.3e-36 157.1 180 55.0
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 6.4e-36 154.8 136 61.8
Hma1.2p1_0665F.1_g199050 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 3.5e-34 149.1 91 83.5
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 2.5e-32 142.9 96 74.0
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 5.6e-32 141.7 138 54.3
Manes.18G138354 Manihot esculenta HOM05D005034 ORTHO05D006234 4.0e-30 135.6 94 73.4
BolC2t10593H Brassica oleracea HOM05D005034 ORTHO05D006234 1.9e-27 126.7 111 63.1
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 3.5e-26 122.5 93 68.8
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 4.3e-24 115.5 194 42.3
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 5.6e-24 115.2 88 68.2
CAN.G8.23 Capsicum annuum HOM05D005034 ORTHO05D006234 7.3e-24 114.8 106 58.5
Hund25564 Selenicereus undatus HOM05D005034 ORTHO05D006234 1.1e-22 110.9 117 59.8
BolC6t36207H Brassica oleracea HOM05D005034 ORTHO05D006234 4.0e-22 109.0 100 59.0
Lalb_Chr05g0227101 Lupinus albus HOM05D005034 ORTHO05D006234 4.1e-19 99.0 66 77.3
Solyc02g150101.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 2.1e-18 96.7 118 53.4
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 3.0e-17 92.8 81 63.0
Lalb_Chr18g0049451 Lupinus albus HOM05D005034 ORTHO05D006234 3.0e-17 92.8 87 57.5
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 3.9e-17 92.4 147 42.2
Nitab4.5_0001130g0160 Nicotiana tabacum HOM05D005034 ORTHO05D006234 3.3e-16 89.4 79 63.3
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 4.3e-16 89.0 81 61.7
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 6.2e-15 85.1 115 44.3
arahy.Tifrunner.gnm1.ann1.4P2RM7 Arachis hypogaea HOM05D005034 ORTHO05D006234 1.8e-14 83.6 86 55.8
PRCOL_00005002 Prasinoderma coloniale HOM05D005034 ORTHO05D006234 5.2e-14 82.0 94 45.7
Nitab4.5_0001446g0070 Nicotiana tabacum HOM05D005034 ORTHO05D006234 2.6e-13 79.7 85 54.1
BolSC37t60790H Brassica oleracea HOM05D005034 ORTHO05D006234 7.6e-13 78.2 93 49.5
MCO12G235 Micromonas commoda HOM05D005034 ORTHO05D006234 9.9e-13 77.8 117 35.0
Solyc00g500194.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.3e-12 77.4 41 95.1
Eucgr.K01772 Eucalyptus grandis HOM05D005034 ORTHO05D006234 2.7e-10 69.7 76 51.3
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 4.6e-10 68.9 96 41.7
HanXRQChr01g0020091 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-09 67.8 69 55.1
Medtr4g050940 Medicago truncatula HOM05D001243 ORTHO05D000843 7.3e-08 61.6 49 63.3

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (11 genes)
Brassica rapa (6 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (6 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (12 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (4 genes)
Magnolia biondii (2 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (1 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings