Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.8e-48 194.1 96 100.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.9e-37 157.9 91 86.8
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.3e-29 132.9 90 73.3
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.5e-28 129.4 90 70.0
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.6e-28 127.5 91 68.1
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 7.3e-28 127.1 90 71.1
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-27 126.3 86 72.1
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.6e-27 125.9 91 73.6
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.1e-27 125.6 91 67.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-27 125.2 86 70.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.6e-27 124.8 90 68.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.7e-27 124.4 86 70.9
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 6.2e-27 124.0 80 77.5
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.2e-27 124.0 90 70.0
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 6.2e-27 124.0 90 68.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 68.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 70.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 70.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 70.0
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 65.6
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 70.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.8e-26 122.5 90 68.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.8e-26 122.5 90 68.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.8e-26 122.5 88 69.3
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 2.3e-26 122.1 90 65.6
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.3e-26 122.1 90 68.9
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 4.0e-26 121.3 87 65.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 4.0e-26 121.3 84 70.2
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 5.2e-26 120.9 90 67.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 6.8e-26 120.6 87 69.0
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.8e-26 120.6 80 71.2
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.8e-26 120.6 90 65.6
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 6.8e-26 120.6 87 66.7
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 8.9e-26 120.2 91 65.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 8.9e-26 120.2 91 65.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 8.9e-26 120.2 90 68.9
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 8.9e-26 120.2 75 77.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 8.9e-26 120.2 90 65.6
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.2e-25 119.8 90 66.7
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.5e-25 119.4 90 67.8
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.5e-25 119.4 91 65.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-25 118.6 80 71.2
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.6e-25 118.6 80 71.2
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.4e-25 117.9 90 66.7
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 4.4e-25 117.9 87 64.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 4.4e-25 117.9 71 77.5
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 5.8e-25 117.5 82 68.3
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.8e-25 117.5 79 75.9
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 5.8e-25 117.5 90 65.6
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 9.8e-25 116.7 82 72.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 9.8e-25 116.7 78 71.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.8e-25 116.7 80 68.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 9.8e-25 116.7 86 66.3
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.3e-24 116.3 80 68.8
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.7e-24 115.9 70 77.1
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.7e-24 115.9 86 65.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.2e-24 115.5 80 68.8
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 2.2e-24 115.5 83 65.1
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 82 67.1
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.9e-24 115.2 82 67.1
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 80 73.8
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 80 73.8
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.7e-24 114.8 90 64.4
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 4.9e-24 114.4 86 65.1
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 8.3e-24 113.6 90 64.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-24 113.6 80 72.5
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-24 113.6 80 72.5
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 8.3e-24 113.6 88 63.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-23 113.2 90 64.4
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.4e-23 112.8 90 65.6
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.9e-23 112.5 85 63.5
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.1e-23 111.3 86 64.0
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.1e-23 111.3 86 64.0
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 5.4e-23 110.9 86 64.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 7.1e-23 110.5 84 61.9
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 9.2e-23 110.2 90 63.3
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-22 109.8 90 63.3
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.6e-22 109.4 88 61.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-22 109.0 73 69.9
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-22 109.0 73 69.9
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.1e-22 109.0 84 61.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.7e-22 108.6 80 61.2
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 2.7e-22 108.6 62 83.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.7e-22 108.6 90 61.1
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.7e-22 108.6 73 67.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.5e-22 108.2 103 56.3
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.3e-21 105.5 61 83.6
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.9e-21 104.8 91 60.4
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.1e-21 104.4 72 69.4
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.1e-20 103.2 90 53.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.8e-19 98.6 106 50.9
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 5.2e-18 94.4 85 51.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.2e-17 93.2 74 55.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 9.9e-17 90.1 79 55.7
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.7e-16 89.4 72 58.3
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.7e-16 89.4 72 58.3
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.7e-16 88.2 72 56.9
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.7e-16 88.2 72 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.4e-15 86.3 61 60.7
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.1e-14 82.4 76 44.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 6.0e-14 80.9 67 53.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.3e-12 75.1 178 31.5
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.2e-10 67.8 67 49.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.8e-06 53.9 56 50.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (5 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings