Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 1.1e-220 770.0 480 100.0
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 7.4e-214 747.3 480 96.9
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.0e-175 620.5 432 81.9
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.3e-125 454.1 357 75.4
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 6.1e-91 339.0 433 54.0
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 3.0e-90 336.7 431 51.5
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 9.1e-87 325.1 436 50.7
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 5.5e-84 315.8 441 48.1
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.2e-83 314.7 443 48.1
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 2.3e-82 310.5 466 48.5
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 9.8e-81 305.1 432 48.1
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 3.7e-80 303.1 438 46.3
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 4.8e-80 302.8 443 47.2
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 1.8e-79 300.8 417 47.0
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 4.1e-79 299.7 435 49.9
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 1.3e-77 294.7 462 45.5
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.3e-77 294.7 431 49.9
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 2.2e-77 293.9 443 47.0
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 4.2e-76 289.7 441 45.1
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 3.6e-75 286.6 467 43.0
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 6.1e-75 285.8 437 47.8
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 1.0e-74 285.0 437 48.1
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 2.3e-74 283.9 439 44.4
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 1.5e-73 281.2 440 45.9
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-73 280.8 449 47.9
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 2.6e-73 280.4 460 46.7
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 2.6e-73 280.4 420 46.0
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.3e-72 278.1 446 47.5
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 3.7e-72 276.6 437 44.2
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 3.7e-72 276.6 441 47.4
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 4.9e-72 276.2 443 42.9
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 4.9e-72 276.2 441 47.2
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 6.3e-72 275.8 446 47.1
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 5.4e-71 272.7 432 46.5
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 3.5e-70 270.0 432 45.4
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 5.9e-70 269.2 429 42.9
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 1.7e-69 267.7 448 43.1
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 2.3e-69 267.3 437 44.2
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.3e-69 267.3 478 41.6
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 1.1e-68 265.0 435 45.3
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 1.5e-68 264.6 417 43.9
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 4.3e-68 263.1 446 46.2
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 1.6e-67 261.2 434 43.8
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.6e-67 261.2 427 43.3
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 8.0e-67 258.8 436 45.6
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.8e-66 257.7 438 44.1
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 4.0e-66 256.5 539 38.2
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 5.2e-66 256.1 477 42.6
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 2.6e-65 253.8 421 43.0
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 3.4e-65 253.4 447 39.6
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 7.5e-65 252.3 445 44.9
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 7.5e-65 252.3 458 44.3
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.3e-64 251.5 510 40.6
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.7e-64 251.1 429 42.0
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 1.7e-64 251.1 480 42.9
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.7e-64 251.1 431 40.8
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 2.9e-64 250.4 443 39.7
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 3.7e-64 250.0 397 45.6
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 8.3e-64 248.8 388 45.9
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 8.3e-64 248.8 427 45.9
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.1e-63 248.4 445 43.1
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.1e-63 248.4 439 46.2
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 4.1e-63 246.5 441 43.8
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 1.6e-62 244.6 445 42.7
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 1.0e-61 241.9 430 40.0
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 2.3e-61 240.7 427 44.3
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 3.9e-61 240.0 437 42.3
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 6.6e-61 239.2 420 42.9
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 1.1e-60 238.4 415 46.0
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 1.9e-60 237.7 426 41.3
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 2.5e-60 237.3 424 39.9
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 2.5e-60 237.3 419 44.2
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 3.3e-60 236.9 421 41.1
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 4.3e-60 236.5 424 43.9
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.3e-60 236.5 438 44.5
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 4.3e-60 236.5 431 42.9
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 7.3e-60 235.7 438 44.5
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 6.2e-59 232.6 428 40.4
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 1.4e-58 231.5 432 44.2
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 6.8e-58 229.2 416 43.0
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 1.5e-57 228.0 394 41.9
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 5.8e-57 226.1 441 42.6
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 5.8e-57 226.1 441 39.9
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 8.3e-56 222.2 456 38.8
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 8.3e-56 222.2 428 39.0
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 1.1e-55 221.9 426 37.8
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 1.9e-55 221.1 267 56.2
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 2.4e-55 220.7 421 39.7
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 2.4e-55 220.7 428 38.3
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 7.0e-55 219.2 416 38.9
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.0e-54 217.6 419 40.6
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 3.5e-54 216.9 426 39.2
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 3.5e-54 216.9 430 37.9
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 6.0e-54 216.1 454 37.0
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 6.0e-54 216.1 390 45.1
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 6.6e-53 212.6 568 37.7
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.1e-52 211.8 409 39.6
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 7.3e-52 209.1 319 45.5
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.1e-51 207.6 460 41.1
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 6.8e-50 202.6 390 42.8
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 6.8e-50 202.6 421 39.9
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 1.2e-49 201.8 269 49.1
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 4.4e-49 199.9 414 38.2
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 5.8e-49 199.5 415 39.8
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.4e-47 194.1 417 36.9
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 3.2e-47 193.7 326 43.6
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 6.0e-46 189.5 426 36.9
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 6.6e-45 186.0 329 41.3
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 3.1e-42 177.2 398 41.2
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 6.8e-42 176.0 401 33.4
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 1.7e-40 171.4 385 44.4
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 2.4e-39 167.5 391 35.3
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.0e-33 147.9 365 38.1
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 7.6e-33 146.0 276 42.0
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 7.8e-30 136.0 459 29.2
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 3.3e-28 130.6 441 32.4
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.3e-27 128.6 129 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 4.8e-27 126.7 473 28.3
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 3.4e-25 120.6 309 35.9
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.2e-24 117.9 275 34.9
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.4e-23 115.2 417 27.3
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 1.9e-23 114.8 197 41.1
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.9e-23 114.8 215 40.5
Nitab4.5_0001273g0010 Nicotiana tabacum HOM05D005355 ORTHO05D006591 6.9e-18 96.3 69 75.4
Nitab4.5_0001803g0110 Nicotiana tabacum HOM05D005355 ORTHO05D006591 9.0e-18 95.9 70 74.3
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 3.4e-17 94.0 168 42.9
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 5.8e-17 93.2 397 25.4
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 2.2e-16 91.3 146 45.9
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 2.2e-16 91.3 409 27.1
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 8.4e-16 89.4 99 45.5
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 7.9e-14 82.8 77 53.2
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 1.3e-13 82.0 173 35.3
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 8.1e-11 72.8 66 56.1
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 1.4e-10 72.0 68 55.9
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 2.1e-06 58.2 334 30.5
MBI15_g42534_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.7e-06 57.8 57 50.9
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 4.6e-06 57.0 67 49.3

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (6 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (3 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings