Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Solyc11g007880.1	Solanum lycopersicum	HOM05D021137	ORTHO05D004438	1.9e-50	202.2	100	100.0
Sopen11g003740	Solanum pennellii	HOM05D021137	ORTHO05D004438	3.5e-49	198.0	100	96.0
PGSC0003DMG400027332	Solanum tuberosum	HOM05D021137	ORTHO05D004438	1.1e-39	166.4	100	83.0
Sopen11g003730	Solanum pennellii	HOM05D021137	ORTHO05D004438	5.6e-39	164.1	100	82.0
Solyc11g007870.1	Solanum lycopersicum	HOM05D021137	ORTHO05D004438	4.0e-37	157.9	100	79.0
CAN.G135.30	Capsicum annuum	HOM05D021137	ORTHO05D004438	3.6e-22	108.2	101	60.4
PGSC0003DMG400027330	Solanum tuberosum	HOM05D005304	ORTHO05D004438	4.0e-13	78.2	96	46.9
Sopen11g003720	Solanum pennellii	HOM05D005304	ORTHO05D004438	1.5e-12	76.3	97	46.4
Solyc11g007860.1	Solanum lycopersicum	HOM05D005304	ORTHO05D004438	2.6e-12	75.5	97	45.4
Nitab4.5_0000593g0370	Nicotiana tabacum	HOM05D005304	ORTHO05D004438	8.4e-11	70.5	103	40.8
CSS0003867	Camellia sinensis var. sinensis	HOM05D017072	ORTHO05D004438	3.2e-10	68.6	99	42.4
Cc02_g10500	Coffea canephora	HOM05D005304	ORTHO05D004438	7.1e-10	67.4	70	50.0
Sed0010031	Sechium edule	HOM05D005304	ORTHO05D004438	1.2e-09	66.6	88	40.9
MELO3C019852.2	Cucumis melo	HOM05D005304	ORTHO05D004438	1.6e-09	66.2	71	46.5
CsaV3_2G032750	Cucumis sativus L.	HOM05D005304	ORTHO05D004438	2.7e-09	65.5	71	46.5
Sopen05g033870	Solanum pennellii	HOM05D005304	ORTHO05D004438	2.7e-09	65.5	74	51.4
PGSC0003DMG400023483	Solanum tuberosum	HOM05D005304	ORTHO05D004438	2.7e-09	65.5	109	39.4
ClCG08G007940	Citrullus lanatus	HOM05D005304	ORTHO05D004438	4.6e-09	64.7	90	38.9
RcHm_v2.0_Chr1g0336411	Rosa chinensis	HOM05D005304	ORTHO05D004438	2.3e-08	62.4	77	44.2
Sed0018085	Sechium edule	HOM05D005304	ORTHO05D004438	3.0e-08	62.0	61	50.8
Lsat_1_v5_gn_8_22700	Lactuca sativa	HOM05D005304	ORTHO05D004438	3.9e-08	61.6	96	40.6
Oeu032435.1	Olea europaea	HOM05D005304	ORTHO05D004438	8.7e-08	60.5	94	39.4
Oeu059829.1	Olea europaea	HOM05D005304	ORTHO05D004438	1.1e-07	60.1	77	45.5
QL08p052941	Quercus lobata	HOM05D005304	ORTHO05D004438	1.1e-07	60.1	57	50.9
FAN10G0320	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	1.5e-07	59.7	90	41.1
Solyc03g071710.1	Solanum lycopersicum	HOM05D005304	ORTHO05D004438	1.5e-07	59.7	114	36.8
Sopen03g019970	Solanum pennellii	HOM05D005304	ORTHO05D004438	1.5e-07	59.7	114	36.8
Gohir.D01G118400	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	1.9e-07	59.3	75	42.7
Gorai.002G144400	Gossypium raimondii	HOM05D005304	ORTHO05D004438	1.9e-07	59.3	75	42.7
QL03p011649	Quercus lobata	HOM05D005304	ORTHO05D004438	1.9e-07	59.3	59	49.2
Cfa001771	Carpinus fangiana	HOM05D005304	ORTHO05D004438	2.5e-07	58.9	59	47.5
Gohir.A05G393600	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	2.5e-07	58.9	72	48.6
Gorai.012G025400	Gossypium raimondii	HOM05D005304	ORTHO05D004438	2.5e-07	58.9	72	48.6
CAN.G612.11	Capsicum annuum	HOM05D005304	ORTHO05D004438	3.3e-07	58.5	120	34.2
FAN03G1417	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	3.3e-07	58.5	78	44.9
Gohir.D04G021300	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	3.3e-07	58.5	72	48.6
Gohir.A01G128800	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	4.3e-07	58.2	75	42.7
SalBow6G1975	Salvia bowleyana	HOM05D005304	ORTHO05D004438	5.7e-07	57.8	73	45.2
FAN02G4580	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	7.4e-07	57.4	90	40.0
Manes.07G093500	Manihot esculenta	HOM05D005304	ORTHO05D004438	7.4e-07	57.4	71	42.3
Nitab4.5_0000107g0230	Nicotiana tabacum	HOM05D005304	ORTHO05D004438	7.4e-07	57.4	57	50.9
QL03p021677	Quercus lobata	HOM05D005304	ORTHO05D004438	7.4e-07	57.4	59	47.5
Sabra08G0019800	Salix brachista	HOM05D005304	ORTHO05D004438	7.4e-07	57.4	74	41.9
FvH4_7g06790	Fragaria vesca	HOM05D005304	ORTHO05D004438	9.6e-07	57.0	80	42.5
FAN01G2164	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	9.6e-07	57.0	77	40.3
FAN06G1004	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	9.6e-07	57.0	80	42.5
FAN10G3090	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	9.6e-07	57.0	80	42.5
Migut.F01597	Erythranthe guttata	HOM05D005304	ORTHO05D004438	1.3e-06	56.6	80	40.0
Potri.008G029600	Populus trichocarpa	HOM05D005304	ORTHO05D004438	1.3e-06	56.6	59	45.8
TAR636G3524	Trochodendron aralioides	HOM05D005304	ORTHO05D004438	1.3e-06	56.6	74	40.5
Sabra10G0179600	Salix brachista	HOM05D005304	ORTHO05D004438	1.6e-06	56.2	74	41.9
Prupe.2G095100	Prunus persica	HOM05D005304	ORTHO05D004438	2.1e-06	55.8	61	42.6
PGSC0003DMG400016914	Solanum tuberosum	HOM05D005304	ORTHO05D004438	2.1e-06	55.8	118	34.7
MSTRG.27507	Avicennia marina	HOM05D005304	ORTHO05D004438	2.8e-06	55.5	72	40.3
Haze_16785	Corylus avellana	HOM05D005304	ORTHO05D004438	3.7e-06	55.1	59	45.8
Atru.chr12.921	Acer truncatum	HOM05D005304	ORTHO05D004438	4.8e-06	54.7	84	38.1
Lsat_1_v5_gn_9_70641	Lactuca sativa	HOM05D005304	ORTHO05D004438	4.8e-06	54.7	74	41.9
CiPaw.01G264700	Carya illinoinensis	HOM05D005304	ORTHO05D004438	6.2e-06	54.3	57	43.9
Gohir.A05G290700	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	6.2e-06	54.3	56	46.4
Gohir.D05G291900	Gossypium hirsutum	HOM05D005304	ORTHO05D004438	6.2e-06	54.3	56	46.4
FAN12G4274	Fragaria x ananassa	HOM05D005304	ORTHO05D004438	8.2e-06	53.9	84	39.3
Potri.010G231600	Populus trichocarpa	HOM05D005304	ORTHO05D004438	8.2e-06	53.9	64	43.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

About us

Support

Legal

Other