Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Solyc08g065765.1	Solanum lycopersicum	HOM05D000107	ORTHO05D016691	1.6e-58	229.2	111	100.0
Sopen10g012240	Solanum pennellii	HOM05D000107	ORTHO05D000385	3.9e-33	144.8	107	66.4
Solyc10g039193.1	Solanum lycopersicum	HOM05D000107	ORTHO05D016691	8.7e-33	143.7	107	64.5
Sopen01g006480	Solanum pennellii	HOM05D000107	ORTHO05D000062	1.1e-32	143.3	109	65.1
Solyc05g150110.1	Solanum lycopersicum	HOM05D000107	ORTHO05D016691	8.1e-31	137.1	98	66.3
Sopen06g014270	Solanum pennellii	HOM05D000107	ORTHO05D014265	1.8e-30	136.0	107	63.6
Solyc02g081087.1	Solanum lycopersicum	HOM05D000107	ORTHO05D016691	8.4e-28	127.1	100	63.0
PGSC0003DMG400042404	Solanum tuberosum	HOM05D000107	ORTHO05D014265	1.0e-20	103.6	95	61.1
Sopen12g014820	Solanum pennellii	HOM05D000107	ORTHO05D000062	8.2e-15	84.0	77	53.2
AUR62042815	Chenopodium quinoa	HOM05D000107	ORTHO05D016691	1.2e-13	80.1	90	43.3
AUR62030809	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	3.4e-13	78.6	93	41.9
AUR62018241	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	4.5e-13	78.2	97	39.2
AUR62037118	Chenopodium quinoa	HOM05D010065	ORTHO05D000385	4.5e-13	78.2	97	40.2
Ah.01g009330	Amaranthus hybridus	HOM05D000107	ORTHO05D000062	2.2e-12	75.9	108	38.9
AUR62042816	Chenopodium quinoa	HOM05D010065	ORTHO05D000385	3.8e-12	75.1	94	39.4
Sopen02g004240	Solanum pennellii	HOM05D000107	ORTHO05D000062	1.1e-11	73.6	42	73.8
Ah.01g011060	Amaranthus hybridus	HOM05D000107	ORTHO05D000062	5.5e-11	71.2	108	37.0
Ah.04g158600	Amaranthus hybridus	HOM05D000107	ORTHO05D000062	5.5e-11	71.2	108	37.0
Ah.13g065570	Amaranthus hybridus	HOM05D000107	ORTHO05D000062	1.2e-10	70.1	108	37.0
AUR62035729	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	2.7e-10	68.9	100	39.0
AUR62040123	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	2.7e-10	68.9	105	32.4
AUR62024349	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	6.1e-10	67.8	113	33.6
AUR62033022	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.4e-09	66.6	114	32.5
AUR62033024	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.4e-09	66.6	114	32.5
AUR62043742	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.4e-09	66.6	113	33.6
AUR62036640	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.8e-09	66.2	113	31.9
AUR62040356	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	2.3e-09	65.9	113	32.7
AUR62022417	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	6.7e-09	64.3	112	33.9
AUR62042513	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	6.7e-09	64.3	104	36.5
Ca_02957_v3	Cicer arietinum L.	HOM05D000107	ORTHO05D000062	1.1e-08	63.5	98	33.7
AUR62031350	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.5e-08	63.2	113	31.9
AUR62036836	Chenopodium quinoa	HOM05D000107	ORTHO05D016691	3.3e-08	62.0	113	31.0
AUR62018288	Chenopodium quinoa	HOM05D004615	ORTHO05D000062	4.3e-08	61.6	99	37.4
Sopen09g017230	Solanum pennellii	HOM05D000107	ORTHO05D014265	5.7e-08	61.2	68	52.9
AUR62013915	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	9.7e-08	60.5	85	38.8
AUR62038913	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	9.7e-08	60.5	99	32.3
AUR62043995	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	9.7e-08	60.5	100	36.0
PGSC0003DMG400043689	Solanum tuberosum	HOM05D000107	ORTHO05D014265	9.7e-08	60.5	56	57.1
EL10Ac9g22743	Beta vulgaris	HOM05D000107	ORTHO05D000062	1.3e-07	60.1	107	31.8
AUR62040733	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.3e-07	60.1	113	31.0
AUR62041975	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.3e-07	60.1	96	36.5
EL10Ac1g01842	Beta vulgaris	HOM05D000107	ORTHO05D000062	1.7e-07	59.7	107	31.8
AUR62029632	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.7e-07	59.7	85	38.8
AUR62015626	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	2.2e-07	59.3	112	30.4
AUR62043993	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	2.2e-07	59.3	91	37.4
SGA_v2.0_scaffold174G39225	Striga asiatica	HOM05D000107	ORTHO05D000062	2.2e-07	59.3	94	33.0
AUR62007768	Chenopodium quinoa	HOM05D004615	ORTHO05D000385	3.7e-07	58.5	85	38.8
AUR62034026	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	3.7e-07	58.5	115	31.3
AUR62012549	Chenopodium quinoa	HOM05D004615	ORTHO05D000385	4.8e-07	58.2	100	37.0
AUR62014956	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	4.8e-07	58.2	113	31.9
AUR62027609	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	4.8e-07	58.2	90	34.4
AUR62034994	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	8.2e-07	57.4	85	37.6
Solyc05g040065.1	Solanum lycopersicum	HOM05D000107	ORTHO05D016691	8.2e-07	57.4	48	58.3
AUR62042259	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.1e-06	57.0	99	35.4
AUR62034995	Chenopodium quinoa	HOM05D000107	ORTHO05D011763	1.4e-06	56.6	85	37.6
AUR62026240	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	1.8e-06	56.2	85	36.5
AUR62026707	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	3.1e-06	55.5	85	35.3
AUR62018146	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	4.1e-06	55.1	109	29.4
AUR62019544	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	4.1e-06	55.1	62	43.5
Solyc05g150139.1	Solanum lycopersicum	HOM05D008041	ORTHO05D000385	4.1e-06	55.1	51	52.9
Lj4g0021587	Lotus japonicus	HOM05D000107	ORTHO05D000062	5.3e-06	54.7	103	28.2
AUR62028444	Chenopodium quinoa	HOM05D000107	ORTHO05D000062	6.9e-06	54.3	107	28.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

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