Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 2.1e-88 328.9 161 100.0
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 6.0e-83 310.8 154 98.7
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.2e-80 303.1 155 97.4
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 9.2e-76 287.0 154 92.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.2e-67 260.0 167 78.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 8.1e-64 247.3 161 78.3
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.1e-57 226.9 149 75.8
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.8e-32 141.7 118 56.8
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 4.5e-30 135.2 72 95.8
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.5e-28 128.3 160 46.9
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.2e-27 127.1 111 55.9
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.6e-27 125.2 123 50.4
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.0e-26 124.0 159 44.0
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.7e-26 121.3 161 45.3
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.5e-25 120.2 66 95.5
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.3e-25 119.0 134 47.8
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.3e-25 119.0 84 65.5
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.3e-25 118.6 133 48.9
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.7e-25 118.2 131 45.8
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.7e-25 117.5 134 47.8
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 1.3e-24 117.1 79 75.9
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-23 114.0 112 49.1
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-23 113.2 167 41.3
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.1e-23 110.9 174 37.4
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 2.6e-22 109.4 131 44.3
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.6e-22 109.4 167 39.5
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.5e-22 108.6 84 61.9
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 4.5e-22 108.6 61 91.8
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-21 107.1 132 46.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 6.5e-21 104.8 99 51.5
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 1.4e-20 103.6 121 43.0
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.5e-20 102.8 149 41.6
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.2e-20 102.4 78 59.0
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 7.2e-20 101.3 128 41.4
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.2e-19 100.5 121 41.3
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 4.7e-19 98.6 130 42.3
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 4.7e-19 98.6 63 85.7
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 2.3e-18 96.3 99 47.5
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-17 92.8 95 44.2
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-17 92.0 155 34.8
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-17 91.3 155 34.8
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.7e-17 90.9 88 58.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 9.7e-17 90.9 155 34.8
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 1.3e-16 90.5 161 34.2
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 2.2e-16 89.7 96 44.8
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.7e-16 89.0 162 32.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-16 88.6 161 33.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-15 86.7 145 35.2
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-15 86.3 101 41.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 6.9e-15 84.7 156 33.3
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 7.7e-14 81.3 144 33.3
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 1.7e-13 80.1 52 78.8
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 2.2e-13 79.7 37 100.0
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.2e-13 79.7 151 33.8
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.5e-13 77.8 94 36.2
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-12 77.4 139 39.6
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.5e-12 76.3 52 78.8
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-11 72.8 138 31.9
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-11 72.0 108 41.7
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 6.1e-11 71.6 102 42.2
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-10 70.1 101 39.6
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.3e-10 69.7 99 38.4
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.0e-10 69.3 96 38.5
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 6.7e-10 68.2 101 31.7
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 8.8e-10 67.8 83 38.6
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 1.5e-09 67.0 73 46.6
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-09 66.2 144 29.9
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 9.7e-09 64.3 55 63.6
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.8e-08 62.8 65 58.5
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 3.7e-08 62.4 32 87.5
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 8.2e-08 61.2 128 32.0
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 1.1e-07 60.8 80 42.5
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 1.4e-07 60.5 55 60.0
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-07 60.1 96 36.5
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-07 60.1 94 29.8
PGSC0003DMG400045567 Solanum tuberosum HOM05D004064 ORTHO05D037746 1.8e-07 60.1 113 31.9
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-07 59.3 96 35.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 4.1e-07 58.9 126 31.0
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.1e-07 58.9 48 54.2
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 9.1e-07 57.8 94 31.9
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-06 57.4 96 34.4
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-06 57.4 96 34.4
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 1.2e-06 57.4 92 33.7
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 1.2e-06 57.4 50 48.0
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-06 57.0 95 35.8
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-06 57.0 93 36.6
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-06 57.0 96 35.4
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-06 57.0 123 31.7
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-06 57.0 123 30.9
RhsimUnG0197100 Rhododendron simsii HOM05D017760 ORTHO05D004107 1.6e-06 57.0 100 35.0
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 92 33.7
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 2.0e-06 56.6 137 25.5
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-06 56.6 94 31.9
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-06 56.6 96 34.4
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 2.0e-06 56.6 92 32.6
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.6e-06 56.2 97 34.0
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.6e-06 56.2 100 35.0
Dinv17061 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Dinv43005 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Dinv43092 Davidia involucrata HOM05D001632 ORTHO05D001534 3.5e-06 55.8 104 34.6
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.5e-06 55.8 96 34.4
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 3.5e-06 55.8 92 32.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 92 32.6
Dinv09483 Davidia involucrata HOM05D012890 ORTHO05D004107 4.5e-06 55.5 104 33.7
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-06 55.1 96 34.4
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-06 55.1 97 34.0
RhsimUnG0221800 Rhododendron simsii HOM05D017760 ORTHO05D004107 5.9e-06 55.1 100 34.0
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 5.9e-06 55.1 92 32.6
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 94 36.2
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 97 34.0
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.7e-06 54.7 96 33.3
Rhsim02G0144400 Rhododendron simsii HOM05D017760 ORTHO05D004107 7.7e-06 54.7 102 32.4

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (5 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (5 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (36 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (44 genes)
Solanum tuberosum (17 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings