Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g017860.1 Solanum lycopersicum HOM05D001371 ORTHO05D024807 1.1e-120 436.8 240 100.0
Solyc04g017790.1 Solanum lycopersicum HOM05D001371 ORTHO05D024807 1.3e-94 350.1 240 84.6
Solyc04g017890.3 Solanum lycopersicum HOM05D001371 ORTHO05D001319 7.0e-88 327.8 293 70.3
Sopen04g009370 Solanum pennellii HOM05D001371 ORTHO05D001319 5.6e-85 318.2 241 78.0
Sopen04g009120 Solanum pennellii HOM05D001371 ORTHO05D024807 2.1e-55 219.9 147 92.5
Sopen07g032580 Solanum pennellii HOM05D001371 ORTHO05D001319 2.7e-47 193.0 420 35.5
Solyc07g064380.4 Solanum lycopersicum HOM05D001371 ORTHO05D001319 2.4e-43 179.9 394 35.0
Sopen07g032560 Solanum pennellii HOM05D001371 ORTHO05D001319 7.6e-42 174.9 423 34.0
Solyc04g018000.3 Solanum lycopersicum HOM05D001371 ORTHO05D001319 7.1e-40 168.3 352 42.3
Solyc04g017880.1 Solanum lycopersicum HOM05D001371 ORTHO05D001319 3.1e-27 126.3 239 37.2
PGSC0003DMG400013917 Solanum tuberosum HOM05D001371 ORTHO05D001319 3.8e-17 92.8 68 67.6
Solyc04g017840.1 Solanum lycopersicum HOM05D001371 ORTHO05D001319 1.2e-15 87.8 62 71.0
Nitab4.5_0001604g0030 Nicotiana tabacum HOM05D001371 ORTHO05D001319 2.7e-15 86.7 69 58.0
Solyc07g064360.3 Solanum lycopersicum HOM05D001371 ORTHO05D001319 2.7e-15 86.7 101 45.5
Nitab4.5_0000397g0330 Nicotiana tabacum HOM05D001371 ORTHO05D001319 8.8e-14 81.6 69 55.1
Solyc07g064400.2 Solanum lycopersicum HOM05D001371 ORTHO05D001319 2.2e-12 77.0 71 64.8
Sopen07g032600 Solanum pennellii HOM05D001371 ORTHO05D001319 2.2e-12 77.0 71 64.8
PGSC0003DMG400037606 Solanum tuberosum HOM05D001371 ORTHO05D001319 3.7e-12 76.3 90 48.9
RcHm_v2.0_Chr5g0038771 Rosa chinensis HOM05D001371 ORTHO05D001319 6.3e-12 75.5 69 56.5
Sopen07g032520 Solanum pennellii HOM05D001371 ORTHO05D001319 6.3e-12 75.5 95 44.2
QL08p011750 Quercus lobata HOM05D001371 ORTHO05D001319 1.8e-11 73.9 74 50.0
Dinv22278 Davidia involucrata HOM05D001371 ORTHO05D001319 2.4e-11 73.6 70 51.4
Hma1.2p1_0673F.1_g201150 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.5e-10 70.9 70 47.1
Hma1.2p1_1222F.1_g268280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.5e-10 70.9 70 47.1
QL05p065318 Quercus lobata HOM05D001371 ORTHO05D001319 2.6e-10 70.1 70 50.0
RcHm_v2.0_Chr5g0038801 Rosa chinensis HOM05D001371 ORTHO05D001319 2.6e-10 70.1 68 51.5
PGSC0003DMG400022226 Solanum tuberosum HOM05D001371 ORTHO05D001319 2.6e-10 70.1 70 61.4
Rhsim06G0215700 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.5e-10 69.3 74 44.6
FvH4_3g22300 Fragaria vesca HOM05D001371 ORTHO05D001319 5.9e-10 68.9 69 52.2
Haze_09653 Corylus avellana HOM05D001371 ORTHO05D001319 7.7e-10 68.6 112 35.7
CSS0038284 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 1.0e-09 68.2 70 48.6
Cc05_g05620 Coffea canephora HOM05D001371 ORTHO05D001319 1.0e-09 68.2 68 45.6
RcHm_v2.0_Chr5g0038781 Rosa chinensis HOM05D001371 ORTHO05D001319 1.0e-09 68.2 68 50.0
Ah.12g058160 Amaranthus hybridus HOM05D001371 ORTHO05D001319 2.2e-09 67.0 116 37.1
CSS0037215 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 2.2e-09 67.0 71 46.5
FAN16G2046 Fragaria x ananassa HOM05D001371 ORTHO05D001319 2.9e-09 66.6 68 47.1
TWI38G1035 Tripterygium wilfordii HOM05D001371 ORTHO05D001319 2.9e-09 66.6 68 47.1
COL.COLO4_09641 Corchorus olitorius HOM05D001371 ORTHO05D001319 3.8e-09 66.2 74 44.6
Peaxi162Scf00152g00530 Petunia axillaris HOM05D001371 ORTHO05D001319 3.8e-09 66.2 111 41.4
MD03G1206300 Malus domestica HOM05D001371 ORTHO05D001319 5.0e-09 65.9 67 49.3
FAN03G3315 Fragaria x ananassa HOM05D001371 ORTHO05D001319 6.5e-09 65.5 70 48.6
Hma1.2p1_1222F.1_g268225 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 6.5e-09 65.5 68 45.6
QL08p011669 Quercus lobata HOM05D001371 ORTHO05D001319 8.5e-09 65.1 68 47.1
Rhsim06G0215800 Rhododendron simsii HOM05D001371 ORTHO05D001319 8.5e-09 65.1 70 47.1
COL.COLO4_10613 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.1e-08 64.7 70 45.7
Gorai.002G087400 Gossypium raimondii HOM05D001371 ORTHO05D001319 1.1e-08 64.7 70 44.3
Lj6g0000404 Lotus japonicus HOM05D001371 ORTHO05D001319 1.1e-08 64.7 69 44.9
EL10Ac4g07870 Beta vulgaris HOM05D001371 ORTHO05D001319 1.4e-08 64.3 68 44.1
FvH4_3g22280 Fragaria vesca HOM05D001371 ORTHO05D001319 1.4e-08 64.3 72 47.2
Cc05_g13550 Coffea canephora HOM05D001371 ORTHO05D001319 1.9e-08 63.9 68 42.6
FvH4_3g22331 Fragaria vesca HOM05D001371 ORTHO05D001319 1.9e-08 63.9 68 45.6
Lj1C870G3 Lonicera japonica HOM05D000134 ORTHO05D001319 1.9e-08 63.9 70 48.6
PGSC0003DMG402013916 Solanum tuberosum HOM05D001371 ORTHO05D024807 1.9e-08 63.9 92 56.5
CSS0038333 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 2.5e-08 63.5 68 47.1
Duzib213G0856 Durio zibethinus HOM05D001371 ORTHO05D001319 2.5e-08 63.5 74 41.9
QL08p011743 Quercus lobata HOM05D001371 ORTHO05D001319 2.5e-08 63.5 70 44.3
Duzib268G0763 Durio zibethinus HOM05D001371 ORTHO05D001319 3.2e-08 63.2 70 42.9
Lj6g0015747 Lotus japonicus HOM05D001371 ORTHO05D001319 3.2e-08 63.2 70 47.1
QL05p063779 Quercus lobata HOM05D001371 ORTHO05D001319 3.2e-08 63.2 70 50.0
Solyc04g017800.1 Solanum lycopersicum HOM05D001371 ORTHO05D001319 3.2e-08 63.2 66 56.1
Lj6g0005634 Lotus japonicus HOM05D001371 ORTHO05D001319 4.2e-08 62.8 70 47.1
RcHm_v2.0_Chr5g0038741 Rosa chinensis HOM05D001371 ORTHO05D001319 5.5e-08 62.4 72 45.8
Prupe.4G209800 Prunus persica HOM05D001371 ORTHO05D001319 7.2e-08 62.0 70 47.1
Hma1.2p1_1271F.1_g271770 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 9.4e-08 61.6 72 48.6
Lj6g0012919 Lotus japonicus HOM05D001371 ORTHO05D001319 9.4e-08 61.6 70 45.7
QL08p011808 Quercus lobata HOM05D001371 ORTHO05D001319 9.4e-08 61.6 70 48.6
Rhsim06G0215500 Rhododendron simsii HOM05D001371 ORTHO05D001319 9.4e-08 61.6 70 44.3
VMungo0540G1413 Vigna mungo HOM05D001371 ORTHO05D001319 9.4e-08 61.6 70 42.9
FvH4_3g22321 Fragaria vesca HOM05D001371 ORTHO05D001319 1.2e-07 61.2 50 58.0
FvH4_7g03072 Fragaria vesca HOM05D001371 ORTHO05D001319 1.2e-07 61.2 70 47.1
FAN06G0975 Fragaria x ananassa HOM05D001371 ORTHO05D001319 1.2e-07 61.2 70 47.1
Peaxi162Scf00450g00078 Petunia axillaris HOM05D001371 ORTHO05D001319 1.6e-07 60.8 68 50.0
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.6e-07 60.8 70 44.3
Sc03g0008760 Simmondsia chinensis HOM05D001371 ORTHO05D001319 1.6e-07 60.8 119 32.8
TWI39G0393 Tripterygium wilfordii HOM05D001371 ORTHO05D001319 1.6e-07 60.8 71 40.8
Actinidia35333 Actinidia chinensis HOM05D001371 ORTHO05D001319 2.1e-07 60.5 82 41.5
Duzib052G0957 Durio zibethinus HOM05D001371 ORTHO05D001319 2.1e-07 60.5 115 33.0
Prupe.4G209700 Prunus persica HOM05D001371 ORTHO05D001319 2.1e-07 60.5 70 42.9
RcHm_v2.0_Chr5g0038381 Rosa chinensis HOM05D001371 ORTHO05D001319 2.1e-07 60.5 72 45.8
Sopen07g032530 Solanum pennellii HOM05D001371 ORTHO05D001319 2.1e-07 60.5 66 45.5
EL10Ac4g07855 Beta vulgaris HOM05D001371 ORTHO05D001319 2.7e-07 60.1 64 46.9
COL.COLO4_09639 Corchorus olitorius HOM05D001371 ORTHO05D001319 2.7e-07 60.1 70 40.0
Gorai.005G249100 Gossypium raimondii HOM05D001371 ORTHO05D001319 2.7e-07 60.1 70 42.9
Lj8A168T103 Lonicera japonica HOM05D001371 ORTHO05D001319 2.7e-07 60.1 71 46.5
Lj8C168T12 Lonicera japonica HOM05D001371 ORTHO05D001319 3.6e-07 59.7 70 45.7
Psat2g014080 Pisum sativum HOM05D001371 ORTHO05D001319 3.6e-07 59.7 90 36.7
Aqoxy2G02406 Aquilegia oxysepala HOM05D001371 ORTHO05D001319 4.7e-07 59.3 70 45.7
AUR62020479 Chenopodium quinoa HOM05D001371 ORTHO05D001319 4.7e-07 59.3 66 43.9
Duzib248G0853 Durio zibethinus HOM05D001371 ORTHO05D001319 4.7e-07 59.3 70 41.4
FAN21G0036 Fragaria x ananassa HOM05D001371 ORTHO05D001319 4.7e-07 59.3 72 41.7
RcHm_v2.0_Chr5g0038491 Rosa chinensis HOM05D001371 ORTHO05D001319 4.7e-07 59.3 56 55.4
RcHm_v2.0_Chr5g0038731 Rosa chinensis HOM05D001371 ORTHO05D001319 4.7e-07 59.3 47 59.6
Duzib132G0682 Durio zibethinus HOM05D001371 ORTHO05D001319 6.1e-07 58.9 70 42.9
Hma1.2p1_0062F.1_g034280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 6.1e-07 58.9 71 46.5
Lalb_Chr02g0155751 Lupinus albus HOM05D001371 ORTHO05D001319 6.1e-07 58.9 70 45.7
Rhsim06G0215600 Rhododendron simsii HOM05D001371 ORTHO05D001319 6.1e-07 58.9 69 42.0
TPR.G24069 Trifolium pratense HOM05D001371 ORTHO05D001319 6.1e-07 58.9 60 46.7
vmacro21038 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 6.1e-07 58.9 80 45.0
AT5G18510 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 8.0e-07 58.5 67 44.8
Haze_09654 Corylus avellana HOM05D001371 ORTHO05D001319 8.0e-07 58.5 68 36.8
FvH4_3g22281 Fragaria vesca HOM05D001371 ORTHO05D001319 8.0e-07 58.5 72 44.4
Lj1g0013444 Lotus japonicus HOM05D001371 ORTHO05D001319 8.0e-07 58.5 75 45.3
QL08p011730 Quercus lobata HOM05D001371 ORTHO05D001319 8.0e-07 58.5 70 42.9
arahy.Tifrunner.gnm1.ann1.Y9R7EH Arachis hypogaea HOM05D001371 ORTHO05D001319 1.0e-06 58.2 89 37.1
Lj1A870T72 Lonicera japonica HOM05D001371 ORTHO05D001319 1.0e-06 58.2 70 44.3
Ah.04g165710 Amaranthus hybridus HOM05D001371 ORTHO05D001319 1.4e-06 57.8 66 40.9
COL.COLO4_09640 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.4e-06 57.8 68 42.6
Duzib213G0305 Durio zibethinus HOM05D001371 ORTHO05D001319 1.4e-06 57.8 68 44.1
Lj6g0016509 Lotus japonicus HOM05D001371 ORTHO05D001319 1.4e-06 57.8 70 42.9
Nn1g03577 Nelumbo nucifera HOM05D001371 ORTHO05D001319 1.4e-06 57.8 68 41.2
Sabra16G0286500 Salix brachista HOM05D001371 ORTHO05D001319 1.4e-06 57.8 74 39.2
AUR62015730 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.8e-06 57.4 66 43.9
Dinv22276 Davidia involucrata HOM05D001371 ORTHO05D001319 1.8e-06 57.4 76 38.2
QL08p011782 Quercus lobata HOM05D001371 ORTHO05D001319 1.8e-06 57.4 68 39.7
Lj8C168T14 Lonicera japonica HOM05D001371 ORTHO05D001319 2.3e-06 57.0 70 42.9
Sp1g27780 Schrenkiella parvula HOM05D001371 ORTHO05D001319 2.3e-06 57.0 70 38.6
GSVIVG01037611001 Vitis vinifera HOM05D001371 ORTHO05D001319 2.3e-06 57.0 88 31.8
Aqoxy7G03260 Aquilegia oxysepala HOM05D001371 ORTHO05D001319 3.0e-06 56.6 109 36.7
MELO3C018073.2 Cucumis melo HOM05D001371 ORTHO05D001319 3.0e-06 56.6 70 34.3
Thhalv10017562m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 3.0e-06 56.6 70 40.0
Sabra16G0286400 Salix brachista HOM05D001371 ORTHO05D001319 3.0e-06 56.6 69 40.6
CANSAT56G1392 Cannabis sativa HOM05D001371 ORTHO05D001319 3.9e-06 56.2 68 42.6
AUR62020491 Chenopodium quinoa HOM05D001371 ORTHO05D001319 3.9e-06 56.2 70 38.6
COL.COLO4_22820 Corchorus olitorius HOM05D001371 ORTHO05D001319 3.9e-06 56.2 69 40.6
Nitab4.5_0007952g0010 Nicotiana tabacum HOM05D001371 ORTHO05D001319 3.9e-06 56.2 66 40.9
QL08p011658 Quercus lobata HOM05D001371 ORTHO05D001319 3.9e-06 56.2 70 42.9
RhsimUnG0223800 Rhododendron simsii HOM05D001371 ORTHO05D001319 3.9e-06 56.2 71 47.9
Sp4g17760 Schrenkiella parvula HOM05D001371 ORTHO05D001319 3.9e-06 56.2 70 40.0
Actinidia09910 Actinidia chinensis HOM05D001371 ORTHO05D001319 5.2e-06 55.8 70 42.9
arahy.Tifrunner.gnm1.ann1.UWY4YC Arachis hypogaea HOM05D001371 ORTHO05D001319 5.2e-06 55.8 89 36.0
BcaB02g09419 Brassica carinata HOM05D001371 ORTHO05D001319 5.2e-06 55.8 70 38.6
AUR62020483 Chenopodium quinoa HOM05D001371 ORTHO05D001319 5.2e-06 55.8 72 36.1
Rhsim09G0021900 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.2e-06 55.8 71 45.1
Rhsim09G0022000 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.2e-06 55.8 71 45.1
Sed0015741 Sechium edule HOM05D001371 ORTHO05D001319 5.2e-06 55.8 69 39.1
Solyc12g039200.1 Solanum lycopersicum HOM05D001371 ORTHO05D001319 5.2e-06 55.8 34 67.6
EL10Ac4g07860 Beta vulgaris HOM05D001371 ORTHO05D001319 6.7e-06 55.5 64 42.2
BcaB04g18353 Brassica carinata HOM05D001371 ORTHO05D001319 6.7e-06 55.5 111 34.2
BcaB07g32873 Brassica carinata HOM05D001371 ORTHO05D001319 6.7e-06 55.5 50 46.0
Psat5g179880 Pisum sativum HOM05D001371 ORTHO05D001319 6.7e-06 55.5 72 34.7
Rhsim06G0217900 Rhododendron simsii HOM05D001371 ORTHO05D001319 6.7e-06 55.5 70 40.0
MSTRG.11923 Avicennia marina HOM05D001371 ORTHO05D001319 8.8e-06 55.1 70 42.9
BraA09t38953Z Brassica rapa HOM05D001371 ORTHO05D001319 8.8e-06 55.1 50 46.0
AUR62015722 Chenopodium quinoa HOM05D001371 ORTHO05D001319 8.8e-06 55.1 68 38.2
ECA236G1250 Erigeron canadensis HOM05D000096 ORTHO05D001319 8.8e-06 55.1 70 42.9
Hma1.2p1_0673F.1_g201180 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 8.8e-06 55.1 68 39.7
Peaxi162Scf00094g01122 Petunia axillaris HOM05D001371 ORTHO05D001319 8.8e-06 55.1 65 41.5

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (3 genes)
Brassica carinata (3 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (5 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (2 genes)
Corchorus olitorius (5 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (6 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (6 genes)
Fragaria x ananassa (4 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (6 genes)
Lactuca sativa (0 genes)
Lonicera japonica (5 genes)
Lotus japonicus (6 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (0 genes)
Quercus lobata (9 genes)
Rhododendron simsii (9 genes)
Rosa chinensis (7 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (11 genes)
Solanum pennellii (7 genes)
Solanum tuberosum (4 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings