Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 5.1e-285 983.8 516 100.0
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 4.0e-274 947.6 504 98.6
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 7.4e-236 820.5 501 85.4
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 4.7e-190 668.3 505 71.3
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.2e-169 600.5 408 77.2
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 9.0e-157 557.8 532 57.1
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 7.6e-156 554.7 557 57.3
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 8.7e-152 541.2 533 56.5
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 3.8e-147 525.8 515 56.5
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 4.9e-147 525.4 525 54.9
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.5e-146 521.9 536 53.7
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 2.1e-145 520.0 528 55.3
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 3.5e-145 519.2 533 54.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.8e-144 516.9 547 51.7
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 1.8e-144 516.9 539 55.1
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 1.5e-143 513.8 533 54.0
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.9e-143 513.5 510 54.7
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 3.3e-143 512.7 536 56.2
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.3e-142 510.8 538 55.4
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.8e-142 509.6 514 53.7
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 6.2e-142 508.4 526 52.7
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 1.1e-141 507.7 503 54.7
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.4e-141 507.3 529 52.7
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 6.9e-141 505.0 531 53.3
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 9.0e-141 504.6 508 52.8
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.0e-139 501.1 510 51.6
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 3.8e-139 499.2 503 52.7
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.8e-139 499.2 506 53.6
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 6.5e-139 498.4 546 52.4
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 8.4e-139 498.0 506 53.8
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.1e-138 497.7 525 53.3
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 3.2e-138 496.1 531 51.6
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 3.2e-138 496.1 527 53.3
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 9.3e-138 494.6 509 53.6
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 3.5e-137 492.7 523 52.6
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 4.6e-137 492.3 534 51.1
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.3e-136 490.7 549 51.5
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 8.7e-136 488.0 506 52.6
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 1.3e-134 484.2 522 52.3
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.1e-133 481.1 508 53.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.5e-132 477.2 528 50.9
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 2.5e-130 469.9 526 51.3
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 5.5e-130 468.8 536 50.0
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.2e-129 467.6 491 53.2
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 6.1e-129 465.3 570 48.2
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 1.0e-128 464.5 511 52.8
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.3e-128 463.4 522 50.0
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 2.0e-127 460.3 538 51.1
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 6.9e-125 451.8 521 48.0
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 4.5e-124 449.1 518 47.9
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 1.3e-123 447.6 529 49.0
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.5e-123 445.3 516 48.6
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.1e-122 444.5 506 50.0
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.4e-122 444.1 530 50.2
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 2.5e-122 443.4 517 50.5
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 9.4e-122 441.4 531 50.5
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 2.1e-121 440.3 508 51.4
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.1e-121 440.3 524 47.7
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 3.6e-121 439.5 518 47.1
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.0e-120 436.4 473 52.0
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 3.9e-120 436.0 513 48.3
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 5.1e-120 435.6 520 47.1
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.1e-120 435.6 535 48.0
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 6.7e-120 435.3 523 47.6
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 1.5e-119 434.1 513 48.1
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 2.0e-119 433.7 668 43.7
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 7.4e-119 431.8 450 53.3
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 1.1e-117 427.9 519 48.2
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 1.1e-117 427.9 478 50.8
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.4e-117 427.6 514 47.5
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.4e-117 427.6 514 47.5
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.4e-117 427.6 514 47.5
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.0e-117 425.2 558 47.7
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 5.9e-116 422.2 462 51.5
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.9e-114 417.2 511 48.7
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.3e-110 404.4 523 46.5
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 6.3e-110 402.1 521 46.4
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.4e-109 401.0 505 47.5
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 2.3e-104 383.6 511 45.4
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 2.0e-103 380.6 507 46.2
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 3.8e-99 366.3 446 49.3
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 8.5e-99 365.2 507 46.2
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 6.8e-96 355.5 510 44.1
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.1e-93 348.2 530 42.6
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.4e-93 347.1 467 43.0
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 5.4e-93 345.9 507 43.8
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 9.1e-93 345.1 518 43.2
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 3.8e-91 339.7 504 41.5
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 3.6e-89 333.2 507 42.2
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 5.2e-88 329.3 504 41.5
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 7.5e-87 325.5 506 42.1
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 4.9e-86 322.8 506 41.7
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.6e-84 317.8 503 41.2
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 4.5e-84 316.2 506 42.1
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.1e-80 303.5 470 46.0
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 1.2e-79 301.6 497 42.1
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.3e-75 288.1 422 43.8
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.8e-72 277.7 513 36.1
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 8.9e-72 275.4 439 41.7
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 1.2e-71 275.0 509 38.1
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 6.4e-70 269.2 412 42.0
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.9e-69 267.7 221 63.8
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.9e-69 267.7 509 36.9
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 4.6e-68 263.1 530 35.8
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 4.3e-66 256.5 505 33.7
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 8.9e-56 222.2 486 34.6
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 4.4e-55 219.9 336 44.3
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.2e-47 195.3 197 56.3
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 7.1e-45 186.0 431 34.8
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.6e-44 183.3 152 63.8
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 8.7e-43 179.1 378 34.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.5e-42 178.3 719 25.9
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 1.3e-35 155.2 125 62.4
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.5e-34 151.0 140 56.4
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 2.5e-34 151.0 101 69.3
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.2e-31 142.1 165 46.7
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 6.5e-30 136.3 106 64.2
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 2.8e-25 120.9 167 45.5
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 8.2e-25 119.4 153 46.4
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 6.5e-22 109.8 56 94.6
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 8.4e-22 109.4 99 56.6
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 7.1e-21 106.3 102 55.9
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 3.3e-18 97.4 286 28.7
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 7.4e-18 96.3 453 25.2
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 6.3e-17 93.2 66 66.7
SHI03974 Sapria himalayana HOM05D004944 ORTHO05D005989 6.3e-17 93.2 142 38.7
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.4e-16 92.0 53 81.1
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 2.6e-15 87.8 53 81.1
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 4.5e-15 87.0 67 62.7
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 5.9e-15 86.7 59 62.7
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 2.7e-12 77.8 121 40.5
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 1.8e-11 75.1 78 48.7
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 3.9e-11 73.9 71 56.3
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 7.4e-10 69.7 106 39.6
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 9.7e-10 69.3 93 41.9
RcHm_v2.0_Chr2g0114761 Rosa chinensis HOM05D004944 ORTHO05D005989 2.4e-08 64.7 42 71.4
RcHm_v2.0_Chr5g0078731 Rosa chinensis HOM05D004944 ORTHO05D005989 2.4e-08 64.7 82 45.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (3 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (4 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (4 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings