Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 1.8e-164 582.4 275 100.0
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 3.9e-135 485.0 270 83.7
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 4.1e-132 474.9 270 83.0
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 1.2e-131 473.4 270 81.5
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 7.7e-131 470.7 271 81.9
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 1.3e-130 469.9 274 81.8
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 1.7e-130 469.5 270 83.0
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 8.5e-130 467.2 270 81.9
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 1.1e-129 466.8 270 81.1
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 1.9e-129 466.1 270 81.1
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 2.5e-129 465.7 270 81.9
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 2.5e-129 465.7 270 81.5
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 3.2e-129 465.3 270 82.6
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 7.2e-129 464.2 270 80.7
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 9.4e-129 463.8 270 80.7
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 9.4e-129 463.8 274 80.7
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.1e-128 462.6 274 80.7
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 4.7e-128 461.5 270 80.7
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 4.7e-128 461.5 270 81.5
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 1.0e-127 460.3 272 81.2
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 1.0e-127 460.3 270 80.0
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 1.8e-127 459.5 270 80.7
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 2.3e-127 459.1 273 81.0
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 3.9e-127 458.4 275 79.3
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 8.8e-127 457.2 270 80.0
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 2.0e-126 456.1 271 80.8
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 2.0e-126 456.1 270 80.0
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 2.6e-126 455.7 270 79.6
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 3.3e-126 455.3 270 79.6
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 3.3e-126 455.3 269 81.0
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 4.4e-126 454.9 270 80.0
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 4.4e-126 454.9 271 80.8
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 5.7e-126 454.5 271 78.6
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 5.7e-126 454.5 272 77.2
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 5.7e-126 454.5 270 80.4
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 9.7e-126 453.8 269 80.7
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.7e-125 453.0 274 79.6
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 2.2e-125 452.6 275 78.5
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 2.2e-125 452.6 270 80.4
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 3.7e-125 451.8 270 79.3
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 3.7e-125 451.8 270 79.3
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 3.7e-125 451.8 270 79.6
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 4.8e-125 451.4 269 78.8
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 8.2e-125 450.7 274 79.2
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 8.2e-125 450.7 308 72.4
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.1e-124 450.3 269 78.8
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 1.4e-124 449.9 270 78.9
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 1.8e-124 449.5 269 78.8
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.8e-124 449.5 269 79.2
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.8e-124 449.5 270 78.5
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 1.8e-124 449.5 270 77.4
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.1e-124 448.7 269 78.8
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 4.1e-124 448.4 269 78.4
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 4.1e-124 448.4 270 79.3
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 5.3e-124 448.0 269 78.1
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 5.3e-124 448.0 270 79.3
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 7.0e-124 447.6 295 72.5
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 7.0e-124 447.6 275 77.8
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 9.1e-124 447.2 269 78.8
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 1.6e-123 446.4 269 78.4
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 1.6e-123 446.4 270 78.9
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 2.6e-123 445.7 270 76.7
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 2.6e-123 445.7 270 77.8
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 2.6e-123 445.7 270 77.8
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 3.5e-123 445.3 270 78.1
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 1.7e-122 443.0 270 78.1
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 2.2e-122 442.6 270 77.4
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 2.2e-122 442.6 264 79.2
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 5.0e-122 441.4 264 79.2
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 5.0e-122 441.4 270 77.8
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 1.9e-121 439.5 269 76.6
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 1.9e-121 439.5 270 76.7
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 1.9e-121 439.5 272 75.7
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.9e-121 439.5 271 75.6
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.9e-121 439.5 271 75.6
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.9e-121 439.5 271 75.6
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 2.5e-121 439.1 270 77.8
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 2.5e-121 439.1 270 77.8
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 5.5e-121 438.0 270 77.4
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 7.2e-121 437.6 270 77.4
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 1.6e-120 436.4 266 77.8
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 2.1e-120 436.0 270 76.3
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 2.7e-120 435.6 270 77.4
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 1.4e-119 433.3 270 76.7
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 2.3e-119 432.6 300 71.7
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 3.0e-119 432.2 272 76.1
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 3.0e-119 432.2 270 75.6
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 3.0e-119 432.2 270 76.7
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 6.8e-119 431.0 274 74.5
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 6.8e-119 431.0 270 74.4
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 6.8e-119 431.0 270 75.9
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 1.2e-118 430.3 270 75.6
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 1.5e-118 429.9 270 75.2
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 1.5e-118 429.9 270 74.4
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 2.0e-118 429.5 270 76.3
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 1.3e-117 426.8 270 73.3
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 1.1e-116 423.7 270 73.0
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 3.8e-114 415.2 270 74.1
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 8.5e-114 414.1 324 65.7
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 9.4e-113 410.6 270 73.3
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 1.6e-112 409.8 270 73.0
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 1.6e-112 409.8 275 70.2
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 2.1e-112 409.5 271 72.3
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 1.8e-111 406.4 363 57.9
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 4.0e-111 405.2 270 71.5
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 6.8e-111 404.4 283 69.6
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 3.4e-110 402.1 272 70.2
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 3.1e-108 395.6 380 53.7
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 1.0e-106 390.6 269 68.0
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 1.1e-105 387.1 270 66.3
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 3.3e-105 385.6 269 66.2
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 1.5e-102 376.7 276 64.5
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 2.0e-102 376.3 276 62.0
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 4.4e-102 375.2 270 64.1
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 5.7e-102 374.8 241 71.8
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 4.9e-101 371.7 300 65.3
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 2.8e-96 355.9 183 89.1
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 4.1e-92 342.0 257 68.5
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 8.1e-88 327.8 253 61.3
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 7.5e-86 321.2 224 69.6
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 3.7e-85 318.9 164 87.8
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 1.1e-81 307.4 271 57.6
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 3.3e-81 305.8 200 73.5
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 6.8e-79 298.1 267 56.6
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 2.2e-77 293.1 270 52.6
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 2.9e-69 266.2 183 68.9
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 1.5e-57 227.3 181 59.1
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.1e-52 211.1 112 86.6
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 9.6e-49 198.0 111 82.9
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 4.9e-45 185.7 106 80.2
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 7.1e-44 181.8 273 41.4
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 2.1e-35 153.7 89 77.5
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 3.3e-33 146.4 72 90.3
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 4.3e-33 146.0 75 88.0
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 9.7e-33 144.8 89 78.7
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 9.4e-28 128.3 177 44.6
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 2.6e-22 110.2 88 60.2
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.9e-20 104.0 112 53.6
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 4.7e-19 99.4 62 72.6
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 3.0e-18 96.7 48 89.6
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 1.5e-17 94.4 55 74.5
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.3e-17 93.2 68 64.7
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 9.7e-17 91.7 83 59.0
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 7.0e-15 85.5 75 54.7
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 2.8e-08 63.5 41 68.3
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 1.2e-06 58.2 32 81.2

Acer truncatum (4 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (3 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (5 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (5 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (5 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (3 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (4 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings