Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006040 Simmondsia chinensis HOM05D007120 ORTHO05D008881 3.1e-34 147.9 75 100.0
PGSC0003DMG400020601 Solanum tuberosum HOM05D007120 ORTHO05D008881 1.3e-11 72.8 45 71.1
Hund13439 Selenicereus undatus HOM05D007120 ORTHO05D008881 2.8e-11 71.6 40 82.5
Nn2g10275 Nelumbo nucifera HOM05D007120 ORTHO05D008881 3.7e-11 71.2 47 74.5
Hund15797 Selenicereus undatus HOM05D007120 ORTHO05D008881 6.3e-11 70.5 41 80.5
Nitab4.5_0012297g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 1.8e-10 68.9 52 61.5
Peaxi162Scf00073g02342 Petunia axillaris HOM05D007120 ORTHO05D008881 2.4e-10 68.6 45 71.1
Solyc03g095730.4 Solanum lycopersicum HOM05D007120 ORTHO05D008881 3.1e-10 68.2 41 73.2
Lj1A968T57 Lonicera japonica HOM05D007120 ORTHO05D008881 4.1e-10 67.8 43 74.4
Nitab4.5_0000171g0210 Nicotiana tabacum HOM05D007120 ORTHO05D008881 5.3e-10 67.4 45 66.7
Sopen07g008940 Solanum pennellii HOM05D007120 ORTHO05D008881 9.1e-10 66.6 40 72.5
Oeu006064.1 Olea europaea HOM05D007120 ORTHO05D008881 1.6e-09 65.9 47 63.8
EL10Ac2g02666 Beta vulgaris HOM05D007120 ORTHO05D008881 2.0e-09 65.5 47 70.2
CAN.G1229.12 Capsicum annuum HOM05D007120 ORTHO05D008881 2.0e-09 65.5 45 64.4
Haze_17366 Corylus avellana HOM05D006907 ORTHO05D008598 2.0e-09 65.5 47 66.0
HanXRQChr10g0312991 Helianthus annuus HOM05D007120 ORTHO05D008881 4.5e-09 64.3 41 68.3
MBI15_g39383_MAGBIO Magnolia biondii HOM05D007120 ORTHO05D008881 4.5e-09 64.3 43 67.4
TAR369G0939 Trochodendron aralioides HOM05D007120 ORTHO05D008881 1.0e-08 63.2 47 63.8
MD01G1169000 Malus domestica HOM05D007120 ORTHO05D008881 1.3e-08 62.8 37 73.0
MD07G1234900 Malus domestica HOM05D007120 ORTHO05D008881 1.7e-08 62.4 37 73.0
Nitab4.5_0011372g0020 Nicotiana tabacum HOM05D007120 ORTHO05D008881 2.2e-08 62.0 37 73.0
Peaxi162Scf00184g00003 Petunia axillaris HOM05D007120 ORTHO05D008881 2.2e-08 62.0 42 66.7
Nn5g26831 Nelumbo nucifera HOM05D007120 ORTHO05D008881 2.9e-08 61.6 42 66.7
MSTRG.27254 Avicennia marina HOM05D007120 ORTHO05D008881 5.0e-08 60.8 47 61.7
CsaV3_6G002350 Cucumis sativus L. HOM05D007120 ORTHO05D008881 5.0e-08 60.8 42 69.0
GSVIVG01032659001 Vitis vinifera HOM05D007120 ORTHO05D008881 5.0e-08 60.8 37 78.4
Gohir.D13G008000 Gossypium hirsutum HOM05D007120 ORTHO05D008881 6.5e-08 60.5 42 71.4
Gorai.013G008400 Gossypium raimondii HOM05D007120 ORTHO05D008881 6.5e-08 60.5 42 71.4
Nitab4.5_0000375g0220 Nicotiana tabacum HOM05D007120 ORTHO05D008881 8.5e-08 60.1 37 70.3
Duzib128G0262 Durio zibethinus HOM05D007120 ORTHO05D008881 1.5e-07 59.3 41 65.9
Cfa001199 Carpinus fangiana HOM05D007120 ORTHO05D008881 1.9e-07 58.9 47 59.6
Cc02_g05250 Coffea canephora HOM05D007120 ORTHO05D008881 2.5e-07 58.5 44 61.4
Gohir.A13G007800 Gossypium hirsutum HOM05D007120 ORTHO05D008881 2.5e-07 58.5 42 69.0
HanXRQChr02g0048061 Helianthus annuus HOM05D007120 ORTHO05D008881 2.5e-07 58.5 42 61.9
CSS0015321 Camellia sinensis var. sinensis HOM05D007120 ORTHO05D008881 3.2e-07 58.2 37 70.3
MELO3C020013.2 Cucumis melo HOM05D007120 ORTHO05D008881 4.2e-07 57.8 40 67.5
Aqoxy4G03269 Aquilegia oxysepala HOM05D007120 ORTHO05D008881 5.5e-07 57.4 45 64.4
CiPaw.14G049800 Carya illinoinensis HOM05D007120 ORTHO05D008881 7.2e-07 57.0 45 57.8
RcHm_v2.0_Chr1g0372461 Rosa chinensis HOM05D007120 ORTHO05D008881 9.4e-07 56.6 38 71.1
RcHm_v2.0_Chr7g0235281 Rosa chinensis HOM05D007120 ORTHO05D008881 9.4e-07 56.6 42 66.7
RcHm_v2.0_Chr7g0235311 Rosa chinensis HOM05D007120 ORTHO05D008881 9.4e-07 56.6 42 66.7
ClCG11G005640 Citrullus lanatus HOM05D007120 ORTHO05D008881 1.2e-06 56.2 43 62.8
Manes.07G142200 Manihot esculenta HOM05D007120 ORTHO05D008881 1.6e-06 55.8 42 61.9
Potri.019G059500 Populus trichocarpa HOM05D007120 ORTHO05D008881 1.6e-06 55.8 42 66.7
Thecc.10G184500 Theobroma cacao HOM05D007120 ORTHO05D008881 1.6e-06 55.8 42 66.7
Manes.10G002800 Manihot esculenta HOM05D007120 ORTHO05D008881 2.7e-06 55.1 39 61.5
COL.COLO4_19468 Corchorus olitorius HOM05D007120 ORTHO05D008881 3.6e-06 54.7 47 63.8
Migut.F00570 Erythranthe guttata HOM05D007120 ORTHO05D008881 3.6e-06 54.7 42 64.3
Os07g0680300 Oryza sativa ssp. japonica HOM05D007120 ORTHO05D008881 3.6e-06 54.7 42 61.9
HPP92_000774 Vanilla planifolia HOM05D007120 ORTHO05D008881 3.6e-06 54.7 41 61.0
HPP92_026799 Vanilla planifolia HOM05D007120 ORTHO05D008881 3.6e-06 54.7 41 61.0
Prupe.2G265200 Prunus persica HOM05D007120 ORTHO05D008881 6.1e-06 53.9 36 63.9
FAN01G0895 Fragaria x ananassa HOM05D007120 ORTHO05D008881 8.0e-06 53.5 38 71.1
Lsat_1_v5_gn_6_11060 Lactuca sativa HOM05D007120 ORTHO05D008881 8.0e-06 53.5 42 57.1
TAR633G1173 Trochodendron aralioides HOM05D009315 ORTHO05D008839 8.0e-06 53.5 36 66.7

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (0 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (1 genes)
Glycine max (0 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings