Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Sc11g0002930	Simmondsia chinensis	HOM05D007408	ORTHO05D009325	4.4e-80	301.2	151	100.0
CANSAT64G2960	Cannabis sativa	HOM05D007408	ORTHO05D009325	3.4e-24	115.5	171	46.2
PGR119G0146	Punica granatum	HOM05D007408	ORTHO05D009325	6.5e-23	111.3	154	44.2
Atru.chr11.1432	Acer truncatum	HOM05D007408	ORTHO05D009325	2.1e-21	106.3	162	45.1
Phvul.003G281600	Phaseolus vulgaris	HOM05D007408	ORTHO05D009325	3.6e-21	105.5	158	43.7
Glyma.16G099500	Glycine max	HOM05D007408	ORTHO05D009325	2.0e-19	99.8	158	42.4
RcHm_v2.0_Chr4g0436431	Rosa chinensis	HOM05D007408	ORTHO05D009325	2.0e-19	99.8	150	46.0
Lalb_Chr20g0122411	Lupinus albus	HOM05D007408	ORTHO05D009325	2.6e-19	99.4	154	42.9
VMungo0251G2162	Vigna mungo	HOM05D007408	ORTHO05D009325	4.4e-19	98.6	152	42.1
MD13G1050800	Malus domestica	HOM05D007408	ORTHO05D009325	7.4e-19	97.8	149	42.3
CiPaw.06G098200	Carya illinoinensis	HOM05D007408	ORTHO05D009325	2.2e-18	96.3	155	43.2
TWI79G0837	Tripterygium wilfordii	HOM05D007408	ORTHO05D009325	2.8e-18	95.9	158	39.9
Cc11_g10990	Coffea canephora	HOM05D007408	ORTHO05D009325	8.2e-18	94.4	153	40.5
Prupe.1G301300	Prunus persica	HOM05D007408	ORTHO05D009325	8.2e-18	94.4	155	40.0
Eucgr.B03072	Eucalyptus grandis	HOM05D007408	ORTHO05D009325	1.1e-17	94.0	159	41.5
Cfa008792	Carpinus fangiana	HOM05D007408	ORTHO05D009325	2.4e-17	92.8	153	41.8
Manes.06G075900	Manihot esculenta	HOM05D007408	ORTHO05D009325	2.4e-17	92.8	149	43.0
SGA_v2.0_scaffold36G14509	Striga asiatica	HOM05D007408	ORTHO05D009325	3.1e-17	92.4	157	42.0
Haze_11804	Corylus avellana	HOM05D007408	ORTHO05D009325	4.1e-17	92.0	124	47.6
Oeu024124.1	Olea europaea	HOM05D007408	ORTHO05D009325	2.6e-16	89.4	149	38.9
Ah.02g127260	Amaranthus hybridus	HOM05D007408	ORTHO05D009325	3.5e-16	89.0	183	32.8
Cpa.g.sc1.248	Carica papaya	HOM05D007408	ORTHO05D009325	7.7e-16	87.8	146	40.4
Sabra08G0084200	Salix brachista	HOM05D007408	ORTHO05D009325	2.2e-15	86.3	120	45.0
Potri.008G111500	Populus trichocarpa	HOM05D007408	ORTHO05D009325	3.8e-15	85.5	155	40.0
TPR.G24816	Trifolium pratense	HOM05D007408	ORTHO05D009325	1.1e-14	84.0	150	42.0
FAN22G2286	Fragaria x ananassa	HOM05D000227	ORTHO05D001491	1.9e-14	83.2	151	39.7
Medtr8g069910	Medicago truncatula	HOM05D007408	ORTHO05D009325	1.9e-14	83.2	151	43.0
FAN07G2148	Fragaria x ananassa	HOM05D000085	ORTHO05D000274	3.2e-14	82.4	121	43.8
FAN12G0389	Fragaria x ananassa	HOM05D000085	ORTHO05D000274	3.2e-14	82.4	121	43.8
FAN17G1226	Fragaria x ananassa	HOM05D000085	ORTHO05D000274	3.2e-14	82.4	121	43.8
Thecc.02G364900	Theobroma cacao	HOM05D007408	ORTHO05D009325	4.2e-14	82.0	125	48.0
arahy.Tifrunner.gnm1.ann1.24G1QJ	Arachis hypogaea	HOM05D007408	ORTHO05D009325	7.2e-14	81.3	148	40.5
TAR629G0610	Trochodendron aralioides	HOM05D007408	ORTHO05D009325	7.2e-14	81.3	148	35.8
DCAR_026703	Daucus carota	HOM05D002818	ORTHO05D003244	1.6e-13	80.1	118	43.2
Solyc05g010130.1	Solanum lycopersicum	HOM05D007408	ORTHO05D009325	3.6e-13	79.0	153	39.9
CsaV3_2G010890	Cucumis sativus L.	HOM05D007408	ORTHO05D009325	6.1e-13	78.2	145	40.7
SalBow8G1270	Salvia bowleyana	HOM05D007408	ORTHO05D009325	6.1e-13	78.2	155	38.1
SalBow8G3082	Salvia bowleyana	HOM05D007408	ORTHO05D009325	6.1e-13	78.2	155	38.1
HanXRQChr15g0475971	Helianthus annuus	HOM05D007408	ORTHO05D009325	1.4e-12	77.0	123	43.1
THA.LOC104822179	Tarenaya hassleriana	HOM05D007408	ORTHO05D009325	1.8e-12	76.6	117	42.7
Migut.L01119	Erythranthe guttata	HOM05D007408	ORTHO05D009325	2.3e-12	76.3	160	36.9
Lj4g0027659	Lotus japonicus	HOM05D007408	ORTHO05D009325	2.3e-12	76.3	159	35.8
HanXRQChr12g0365241	Helianthus annuus	HOM05D007408	ORTHO05D009325	4.0e-12	75.5	157	36.3
Ciclev10033573m.g	Citrus clementina	HOM05D007408	ORTHO05D009325	1.2e-11	73.9	111	45.0
HanXRQChr17g0551421	Helianthus annuus	HOM05D007408	ORTHO05D009325	2.6e-11	72.8	123	40.7
Psat4g113200	Pisum sativum	HOM05D007408	ORTHO05D009325	2.6e-11	72.8	127	44.1
THA.LOC104805235	Tarenaya hassleriana	HOM05D007408	ORTHO05D009325	3.3e-11	72.4	146	37.0
Gohir.D12G176300	Gossypium hirsutum	HOM05D007408	ORTHO05D009325	7.5e-11	71.2	127	41.7
Gorai.008G188700	Gossypium raimondii	HOM05D007408	ORTHO05D009325	7.5e-11	71.2	127	41.7
Gohir.A12G173800	Gossypium hirsutum	HOM05D007408	ORTHO05D009325	9.7e-11	70.9	130	40.0
AT3G25597	Arabidopsis thaliana	HOM05D007408	ORTHO05D009325	3.7e-10	68.9	151	38.4
BcaC06g31130	Brassica carinata	HOM05D007408	ORTHO05D009325	8.2e-10	67.8	121	40.5
Aqoxy3G03838	Aquilegia oxysepala	HOM05D007408	ORTHO05D009325	1.1e-09	67.4	150	40.0
Manes.14G095101	Manihot esculenta	HOM05D007408	ORTHO05D009325	1.1e-09	67.4	74	54.1
Carub.0005s0338	Capsella rubella	HOM05D007408	ORTHO05D009325	1.4e-09	67.0	153	36.6
CARHR146570	Cardamine hirsuta	HOM05D007408	ORTHO05D009325	1.8e-09	66.6	149	38.3
AT1G68700	Arabidopsis thaliana	HOM05D007408	ORTHO05D009325	3.1e-09	65.9	133	34.6
Lsat_1_v5_gn_3_60200	Lactuca sativa	HOM05D007408	ORTHO05D009325	3.1e-09	65.9	118	39.0
BcaC06g33976	Brassica carinata	HOM05D007408	ORTHO05D009325	4.1e-09	65.5	149	38.3
BraA06t27184Z	Brassica rapa	HOM05D007408	ORTHO05D009325	5.3e-09	65.1	149	37.6
C07p34420	Brassica napus	HOM05D007408	ORTHO05D009325	7.0e-09	64.7	149	37.6
A06p42710	Brassica napus	HOM05D007408	ORTHO05D009325	9.1e-09	64.3	149	37.6
Thhalv10005058m.g	Eutrema salsugineum	HOM05D007408	ORTHO05D009325	9.1e-09	64.3	150	36.7
BcaB03g15828	Brassica carinata	HOM05D007408	ORTHO05D009325	1.2e-08	63.9	136	33.8
CARHR061510	Cardamine hirsuta	HOM05D007408	ORTHO05D009325	1.2e-08	63.9	140	31.4
C06p37420	Brassica napus	HOM05D007408	ORTHO05D009325	7.7e-08	61.2	133	34.6
MELO3C020393.2	Cucumis melo	HOM05D007408	ORTHO05D009325	7.7e-08	61.2	145	37.2
A08p27160	Brassica napus	HOM05D007408	ORTHO05D009325	1.0e-07	60.8	119	37.0
Sp2g14870	Schrenkiella parvula	HOM05D007408	ORTHO05D009325	1.0e-07	60.8	150	36.0
BcaB03g15446	Brassica carinata	HOM05D007408	ORTHO05D009325	1.3e-07	60.5	136	32.4
A09p39710	Brassica napus	HOM05D007408	ORTHO05D009325	2.2e-07	59.7	115	33.0
BraA09t39470Z	Brassica rapa	HOM05D007408	ORTHO05D009325	2.2e-07	59.7	115	33.0
C06p41170	Brassica napus	HOM05D000085	ORTHO05D000274	2.9e-07	59.3	136	33.1
Carub.0001s2482	Capsella rubella	HOM05D007408	ORTHO05D009325	2.9e-07	59.3	115	34.8
BcaC08g46321	Brassica carinata	HOM05D000085	ORTHO05D000274	3.8e-07	58.9	136	32.4
A07p31850	Brassica napus	HOM05D007408	ORTHO05D009325	3.8e-07	58.9	127	34.6
BolC6t39308H	Brassica oleracea	HOM05D000085	ORTHO05D000274	3.8e-07	58.9	136	32.4
CARHR025780	Cardamine hirsuta	HOM05D007408	ORTHO05D009325	3.8e-07	58.9	129	34.9
Sp5g23800	Schrenkiella parvula	HOM05D007408	ORTHO05D009325	3.8e-07	58.9	120	37.5
BcaC03g17274	Brassica carinata	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	148	33.8
A07p35100	Brassica napus	HOM05D000085	ORTHO05D000274	6.5e-07	58.2	120	35.0
C02p52180	Brassica napus	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	148	33.8
C05p24760	Brassica napus	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	120	35.8
BolC2t11303H	Brassica oleracea	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	148	33.8
BraA02t08410Z	Brassica rapa	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	148	33.8
BraA07t30814Z	Brassica rapa	HOM05D007408	ORTHO05D009325	6.5e-07	58.2	127	34.6
BraA07t31103Z	Brassica rapa	HOM05D000085	ORTHO05D000274	6.5e-07	58.2	120	35.0
BolC6t38845H	Brassica oleracea	HOM05D000085	ORTHO05D000274	8.5e-07	57.8	130	33.8
BraA08t34661Z	Brassica rapa	HOM05D007408	ORTHO05D009325	8.5e-07	57.8	118	35.6
AL1G39610	Arabidopsis lyrata	HOM05D007408	ORTHO05D009325	1.9e-06	56.6	118	34.7
AL5G14110	Arabidopsis lyrata	HOM05D007408	ORTHO05D009325	1.9e-06	56.6	154	34.4
BcaC05g26429	Brassica carinata	HOM05D007408	ORTHO05D009325	1.9e-06	56.6	120	35.0
C03p72700	Brassica napus	HOM05D007408	ORTHO05D009325	1.9e-06	56.6	119	37.0
BolC3t19568H	Brassica oleracea	HOM05D007408	ORTHO05D009325	1.9e-06	56.6	119	37.0
Carub.0002s1524	Capsella rubella	HOM05D007408	ORTHO05D009325	2.5e-06	56.2	124	32.3
A02p33920	Brassica napus	HOM05D007408	ORTHO05D009325	3.2e-06	55.8	117	36.8
Sed0018728	Sechium edule	HOM05D007408	ORTHO05D009325	4.2e-06	55.5	134	38.1
ECA233G1102	Erigeron canadensis	HOM05D002818	ORTHO05D003244	5.5e-06	55.1	123	35.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

Contact Settings

Data Settings

Program Settings

About us

Support

Legal

Other