Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.1e-262 907.9 450 100.0
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 2.2e-220 768.8 451 84.5
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 8.5e-220 766.9 448 84.6
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.9e-219 765.8 448 84.8
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 5.2e-217 757.7 451 84.0
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 2.6e-216 755.4 451 83.1
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.1e-214 748.4 452 83.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 4.1e-214 748.0 447 83.0
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 3.5e-213 745.0 451 80.9
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.5e-213 745.0 445 83.4
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 5.9e-213 744.2 449 81.3
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.0e-212 743.4 451 81.4
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.3e-212 743.0 451 81.4
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.1e-211 740.0 451 80.9
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 1.1e-211 740.0 448 81.5
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.5e-211 739.6 451 80.9
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.5e-211 739.6 451 81.4
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.2e-211 738.4 449 82.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 4.2e-211 738.0 449 82.0
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 7.2e-211 737.3 447 81.0
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 1.6e-210 736.1 451 80.3
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 4.7e-210 734.6 450 80.4
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.0e-209 733.4 453 81.2
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.8e-209 732.6 456 81.4
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 5.2e-209 731.1 447 79.9
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 8.8e-209 730.3 449 80.6
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 8.8e-209 730.3 451 79.6
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.0e-208 729.2 473 76.5
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 5.7e-208 727.6 417 86.1
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 6.3e-207 724.2 451 79.8
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 6.3e-207 724.2 452 79.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.4e-206 723.0 460 77.8
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 2.4e-206 722.2 453 78.4
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 2.4e-206 722.2 484 75.4
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 4.1e-206 721.5 432 81.5
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.3e-206 721.1 453 77.7
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 5.3e-206 721.1 478 77.8
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.6e-205 719.5 441 80.5
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.5e-205 718.4 449 80.4
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 3.5e-205 718.4 449 79.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 3.5e-205 718.4 453 78.1
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.3e-204 716.5 442 80.3
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 2.9e-204 715.3 452 77.4
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.5e-204 714.1 442 80.1
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 4.2e-203 711.4 451 78.9
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 7.2e-203 710.7 457 76.8
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 7.2e-203 710.7 440 79.8
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.2e-202 709.9 450 77.3
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 4.7e-202 708.0 451 77.2
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 8.0e-202 707.2 453 75.3
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.8e-201 706.1 456 77.2
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.0e-201 705.3 447 79.0
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.0e-201 705.3 453 74.8
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 3.0e-201 705.3 447 77.2
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 4.0e-201 704.9 457 76.6
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.2e-200 703.4 453 75.1
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 4.4e-200 701.4 456 76.5
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 9.8e-200 700.3 472 72.5
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.7e-199 699.5 456 76.8
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.7e-199 699.5 457 75.1
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 3.7e-199 698.4 464 73.7
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 3.7e-199 698.4 453 74.6
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 6.3e-199 697.6 443 77.4
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 6.3e-199 697.6 431 77.5
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 8.3e-199 697.2 451 74.5
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 8.3e-199 697.2 430 80.2
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.1e-198 695.3 447 76.1
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 4.1e-198 694.9 470 73.4
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 9.1e-198 693.7 451 78.3
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.2e-197 693.3 453 74.6
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.2e-197 693.3 452 74.8
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-197 693.0 453 73.7
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.7e-197 692.2 453 74.0
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 7.7e-197 690.6 460 74.8
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.9e-196 688.7 460 74.3
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 5.0e-196 688.0 450 74.0
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 4.2e-195 684.9 473 70.8
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.2e-194 683.3 458 74.5
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 2.1e-194 682.6 451 75.2
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 3.6e-194 681.8 453 73.3
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 6.1e-194 681.0 482 69.3
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.0e-193 680.2 444 75.5
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.0e-193 680.2 447 74.7
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 5.2e-193 677.9 451 74.9
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 8.9e-193 677.2 449 75.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 9.8e-192 673.7 461 73.5
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 4.1e-190 668.3 497 71.4
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 2.7e-189 665.6 485 72.0
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 4.5e-189 664.8 460 71.5
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 3.8e-188 661.8 456 73.2
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 3.0e-185 652.1 432 71.5
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 7.5e-184 647.5 447 73.2
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 8.3e-183 644.0 408 78.4
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.1e-182 643.7 485 67.0
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 4.1e-182 641.7 407 79.9
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 8.0e-178 627.5 413 73.6
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.4e-177 626.7 384 77.9
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.6e-173 613.2 410 74.6
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.1e-173 612.8 466 68.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 8.6e-172 607.4 451 69.0
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.2e-170 603.6 371 81.7
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 3.6e-170 602.1 458 66.4
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 8.1e-170 600.9 450 68.2
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 2.1e-162 576.2 436 64.2
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 2.4e-158 562.8 453 60.7
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 7.8e-157 557.8 430 62.3
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 6.6e-156 554.7 425 62.8
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.1e-153 545.8 322 82.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 1.2e-152 543.9 429 61.1
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 2.4e-137 493.0 455 60.0
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 6.7e-132 474.9 277 80.1
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.3e-119 434.1 447 56.4
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 4.8e-114 415.6 437 46.9
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 4.2e-110 402.5 439 49.0
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.2e-98 363.6 315 61.3
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 4.8e-98 362.5 369 56.1
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.8e-90 336.7 181 87.3
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 5.5e-86 322.4 497 37.6
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.9e-58 230.3 335 43.3
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 4.9e-58 229.6 189 68.8
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.5e-54 218.0 108 90.7
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 6.2e-53 212.6 380 39.7
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 8.9e-44 182.2 393 35.9
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 2.6e-43 180.6 124 76.6
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 6.4e-42 176.0 123 75.6
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 3.3e-38 163.7 137 62.8
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 1.3e-31 141.7 84 72.6
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 6.6e-31 139.4 101 69.3
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 2.0e-27 127.9 125 53.6
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.0e-23 114.0 83 66.3
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 3.3e-22 110.5 67 70.1
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 4.3e-22 110.2 75 69.3
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 6.9e-20 102.8 215 29.3
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 3.4e-19 100.5 106 57.5
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 1.0e-18 99.0 67 68.7
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 6.5e-18 96.3 102 54.9
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 7.1e-17 92.8 61 75.4
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.6e-13 81.6 56 75.0

Acer truncatum (3 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (4 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (2 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (4 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (4 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings