Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 0.0e+00 2134.8 1132 100.0
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 0.0e+00 1714.9 1135 77.6
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 0.0e+00 1686.0 1135 76.7
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 0.0e+00 1681.4 1135 76.1
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 0.0e+00 1670.6 1141 75.5
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 0.0e+00 1670.2 1136 74.7
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 0.0e+00 1665.2 1136 75.8
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 0.0e+00 1664.0 1135 75.1
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 0.0e+00 1658.3 1135 74.4
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 0.0e+00 1654.8 1138 75.9
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 0.0e+00 1651.0 1138 74.9
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 0.0e+00 1646.3 1138 74.8
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 0.0e+00 1644.8 1145 74.1
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 0.0e+00 1644.8 1137 74.1
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 0.0e+00 1641.7 1137 73.5
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 0.0e+00 1639.4 1141 73.7
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 0.0e+00 1637.9 1141 74.3
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 0.0e+00 1632.5 1144 73.4
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 0.0e+00 1630.5 1144 73.4
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 0.0e+00 1629.8 1139 73.3
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 0.0e+00 1629.4 1135 73.9
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 0.0e+00 1628.6 1139 73.1
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 0.0e+00 1628.2 1139 73.2
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 0.0e+00 1627.5 1136 71.9
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 0.0e+00 1626.3 1135 73.7
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 0.0e+00 1625.9 1137 73.1
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 0.0e+00 1625.5 1135 73.3
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 0.0e+00 1624.8 1136 71.9
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 0.0e+00 1623.6 1142 73.1
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 0.0e+00 1622.8 1136 73.8
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 0.0e+00 1622.1 1136 73.8
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 0.0e+00 1621.7 1139 73.0
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 0.0e+00 1620.9 1139 72.7
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 0.0e+00 1620.9 1139 72.5
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 0.0e+00 1619.0 1135 73.1
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 0.0e+00 1617.8 1135 73.0
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 0.0e+00 1615.9 1133 72.6
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 0.0e+00 1612.4 1138 73.2
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 0.0e+00 1611.7 1135 73.3
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 0.0e+00 1609.3 1141 72.9
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 0.0e+00 1607.8 1104 74.5
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 0.0e+00 1602.0 1136 72.4
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 0.0e+00 1601.6 1137 71.8
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 0.0e+00 1600.5 1136 74.1
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 0.0e+00 1599.7 1141 73.6
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 0.0e+00 1595.5 1132 72.0
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 0.0e+00 1595.1 1189 69.1
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 0.0e+00 1589.3 1137 70.8
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 0.0e+00 1588.2 1138 72.1
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 0.0e+00 1587.0 1141 72.6
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 0.0e+00 1586.6 1112 73.5
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 0.0e+00 1585.5 1137 72.3
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 0.0e+00 1583.9 1139 71.0
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 0.0e+00 1582.4 1139 71.6
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 0.0e+00 1578.1 1134 71.7
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 0.0e+00 1572.4 1138 70.9
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 0.0e+00 1569.7 1139 70.6
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 0.0e+00 1560.4 1141 70.7
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 0.0e+00 1554.7 1139 69.6
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 0.0e+00 1554.7 1135 70.3
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 0.0e+00 1531.9 1138 68.8
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 0.0e+00 1528.8 1135 69.2
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 0.0e+00 1527.3 1139 68.8
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 0.0e+00 1511.5 1147 67.2
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 0.0e+00 1511.5 1140 67.6
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 0.0e+00 1507.7 1136 69.8
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 0.0e+00 1505.7 1068 71.0
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 0.0e+00 1501.9 1140 67.9
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 0.0e+00 1500.0 1135 68.1
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 0.0e+00 1496.9 1140 67.1
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 0.0e+00 1490.7 1027 72.9
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 0.0e+00 1490.3 1140 66.5
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 0.0e+00 1489.2 1139 66.1
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 0.0e+00 1485.7 1140 66.5
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 0.0e+00 1483.8 1140 66.0
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 0.0e+00 1482.6 1144 68.2
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 0.0e+00 1482.6 1144 68.2
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 0.0e+00 1479.5 1142 66.4
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 0.0e+00 1477.2 1139 66.5
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 0.0e+00 1476.1 1142 66.4
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 0.0e+00 1475.7 1142 66.4
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 0.0e+00 1474.5 1140 66.0
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 0.0e+00 1472.2 1142 66.4
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 0.0e+00 1471.8 1010 74.9
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 0.0e+00 1471.8 1078 69.0
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 0.0e+00 1470.3 1139 65.0
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 0.0e+00 1470.3 1140 65.5
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 0.0e+00 1469.9 1138 67.1
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 0.0e+00 1467.2 1138 67.4
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 0.0e+00 1466.1 1140 65.4
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 0.0e+00 1458.7 1139 65.1
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 0.0e+00 1454.9 1139 65.0
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 0.0e+00 1437.6 1078 68.0
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 0.0e+00 1434.5 1073 70.0
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 0.0e+00 1409.4 1033 68.8
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 0.0e+00 1370.5 922 74.9
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 0.0e+00 1363.6 1097 65.5
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 0.0e+00 1349.0 1155 61.4
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 0.0e+00 1345.5 1128 60.7
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 0.0e+00 1344.7 923 74.2
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 0.0e+00 1341.6 1078 64.1
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 0.0e+00 1298.1 1071 61.4
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 0.0e+00 1292.7 1076 60.1
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 0.0e+00 1262.7 900 71.3
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 0.0e+00 1225.7 887 68.8
Atru.chr12.1443 Acer truncatum HOM05D005483 ORTHO05D006924 0.0e+00 1165.2 838 72.1
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 0.0e+00 1125.5 901 64.7
CSS0027672 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 0.0e+00 1084.3 802 70.4
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 7.7e-310 1067.4 1071 51.3
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 2.2e-304 1049.3 1085 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 3.2e-292 1008.8 1070 47.6
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 4.2e-292 1008.4 1063 50.2
DCAR_026441 Daucus carota HOM05D005483 ORTHO05D006924 4.1e-287 991.9 672 74.9
unitig_22.g6373 Utricularia gibba HOM05D005483 ORTHO05D006924 2.5e-284 982.6 760 65.8
Nitab4.5_0002569g0090 Nicotiana tabacum HOM05D005483 ORTHO05D006924 5.6e-244 848.6 612 70.9
CDE05G1761 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 9.2e-239 831.2 895 52.8
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 1.2e-217 761.1 1090 40.5
Zm00001eb113290 Zea mays HOM05D005483 ORTHO05D006924 5.3e-210 735.7 617 60.8
Hma1.2p1_1494F.1_g286880 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 1.5e-151 541.6 423 70.0
RcHm_v2.0_Chr4g0402251 Rosa chinensis HOM05D005483 ORTHO05D006924 4.9e-147 526.6 376 68.9
DCAR_026440 Daucus carota HOM05D005483 ORTHO05D006924 6.4e-139 499.6 434 63.8
Os11g0528200 Oryza sativa ssp. japonica HOM05D005483 ORTHO05D006924 6.0e-121 439.9 351 63.0
unitig_22.g6372 Utricularia gibba HOM05D005483 ORTHO05D006924 2.8e-94 351.3 316 61.1
Cre01.g018050 Chlamydomonas reinhardtii HOM05D005483 ORTHO05D006924 4.8e-94 350.5 1197 27.6
MCO16G196 Micromonas commoda HOM05D005483 ORTHO05D006924 3.8e-91 340.9 1140 28.2
Actinidia22109 Actinidia chinensis HOM05D005483 ORTHO05D006924 1.6e-86 325.5 310 59.4
SEGI_02355 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 2.4e-85 321.6 361 48.8
Actinidia22108 Actinidia chinensis HOM05D005483 ORTHO05D006924 6.7e-80 303.5 335 57.6
Oeu011729.2 Olea europaea HOM05D005483 ORTHO05D000122 5.9e-68 263.8 326 46.9
SGA_v2.0_scaffold98G29280 Striga asiatica HOM05D005483 ORTHO05D007482 3.2e-58 231.5 323 45.5
Lj6C839G5 Lonicera japonica HOM05D005483 ORTHO05D006924 7.2e-42 177.2 154 64.9
Pp3c1_41760 Physcomitrium patens HOM05D005483 ORTHO05D006924 3.3e-34 151.8 640 23.0
RcHm_v2.0_Chr6g0278911 Rosa chinensis HOM05D005483 ORTHO05D006924 1.3e-30 139.8 111 68.5
DCAR_029048 Daucus carota HOM05D005483 ORTHO05D006924 1.6e-25 122.9 107 67.3
RcHm_v2.0_Chr2g0133761 Rosa chinensis HOM05D005483 ORTHO05D006924 2.6e-23 115.5 86 72.1
RcHm_v2.0_Chr5g0056851 Rosa chinensis HOM05D005483 ORTHO05D006924 4.4e-23 114.8 72 72.2
RcHm_v2.0_Chr7g0226991 Rosa chinensis HOM05D005483 ORTHO05D006924 4.4e-23 114.8 68 75.0
RcHm_v2.0_Chr2g0126951 Rosa chinensis HOM05D005483 ORTHO05D006924 1.7e-22 112.8 86 72.1
Haze_11131 Corylus avellana HOM05D005420 ORTHO05D006524 4.4e-07 61.6 95 47.4
Lj2g0025677 Lotus japonicus HOM05D005483 ORTHO05D007091 9.9e-07 60.5 92 44.6

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (7 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings