Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
SGA_v2.0_scaffold85G26669	Striga asiatica	HOM05D018166	ORTHO05D011912	4.0e-79	298.1	161	100.0
SGA_v2.0_scaffold96G29033	Striga asiatica	HOM05D018166	ORTHO05D011912	1.9e-73	279.3	161	89.4
SGA_v2.0_scaffold21G09368	Striga asiatica	HOM05D018166	ORTHO05D011912	2.1e-72	275.8	161	88.8
SGA_v2.0_scaffold99G29481	Striga asiatica	HOM05D018166	ORTHO05D011912	2.8e-72	275.4	161	88.8
SGA_v2.0_scaffold117G32327	Striga asiatica	HOM05D018166	ORTHO05D011912	1.2e-70	270.0	161	87.0
SGA_v2.0_scaffold3G01620	Striga asiatica	HOM05D018395	ORTHO05D011912	3.1e-15	85.9	113	41.6
SGA_v2.0_scaffold50G18510	Striga asiatica	HOM05D029849	ORTHO05D011912	5.3e-15	85.1	122	38.5
SGA_v2.0_scaffold11G05582	Striga asiatica	HOM05D018166	ORTHO05D011912	1.2e-14	84.0	164	32.3
SGA_v2.0_scaffold158G37502	Striga asiatica	HOM05D018612	ORTHO05D011912	3.4e-14	82.4	114	38.6
SGA_v2.0_scaffold223G42819	Striga asiatica	HOM05D018612	ORTHO05D011912	3.4e-14	82.4	91	41.8
SGA_v2.0_scaffold279G46774	Striga asiatica	HOM05D018612	ORTHO05D011912	3.4e-14	82.4	89	43.8
SGA_v2.0_scaffold5187G54608	Striga asiatica	HOM05D018612	ORTHO05D011912	5.9e-14	81.6	71	47.9
SGA_v2.0_scaffold147G36332	Striga asiatica	HOM05D013095	ORTHO05D011912	2.9e-13	79.3	100	40.0
SGA_v2.0_scaffold85G26590	Striga asiatica	HOM05D013095	ORTHO05D011912	2.9e-13	79.3	100	40.0
SGA_v2.0_scaffold266G46147	Striga asiatica	HOM05D029849	ORTHO05D011912	3.8e-13	79.0	97	39.2
SGA_v2.0_scaffold25G11032	Striga asiatica	HOM05D018612	ORTHO05D011912	8.5e-13	77.8	139	34.5
SGA_v2.0_scaffold211G42115	Striga asiatica	HOM05D018612	ORTHO05D011912	1.4e-12	77.0	89	41.6
SGA_v2.0_scaffold355G49765	Striga asiatica	HOM05D013095	ORTHO05D011912	1.4e-12	77.0	100	38.0
SGA_v2.0_scaffold136G35019	Striga asiatica	HOM05D018612	ORTHO05D011912	3.2e-12	75.9	114	37.7
BcaC04g20956	Brassica carinata	HOM05D008073	ORTHO05D000309	2.6e-09	66.2	106	34.9
BolC9t56587H	Brassica oleracea	HOM05D008073	ORTHO05D000309	2.6e-09	66.2	106	34.9
C09p37560	Brassica napus	HOM05D008073	ORTHO05D000309	4.4e-09	65.5	95	36.8
SGA_v2.0_scaffold6G03468	Striga asiatica	HOM05D018395	ORTHO05D011912	2.2e-08	63.2	60	50.0
Peaxi162Scf00814g00243	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.8e-08	62.8	76	43.4
Psat3g069680	Pisum sativum	HOM05D018012	ORTHO05D000309	4.8e-08	62.0	103	39.8
Lsat_1_v5_gn_8_86741	Lactuca sativa	HOM05D009585	ORTHO05D000309	8.2e-08	61.2	69	42.0
Peaxi162Scf00446g00005	Petunia axillaris	HOM05D001383	ORTHO05D000309	8.2e-08	61.2	74	37.8
Psat0s2572g0080	Pisum sativum	HOM05D018012	ORTHO05D000309	8.2e-08	61.2	103	39.8
Lsat_1_v5_gn_4_135900	Lactuca sativa	HOM05D009585	ORTHO05D000309	1.1e-07	60.8	90	33.3
SalBow4G0405	Salvia bowleyana	HOM05D008808	ORTHO05D009453	1.1e-07	60.8	60	45.0
SalBow7G0742	Salvia bowleyana	HOM05D008808	ORTHO05D009453	1.1e-07	60.8	132	30.3
Peaxi162Scf00012g01429	Petunia axillaris	HOM05D001383	ORTHO05D000309	1.4e-07	60.5	76	42.1
Migut.M00684	Erythranthe guttata	HOM05D001383	ORTHO05D000309	1.8e-07	60.1	104	33.7
Lsat_1_v5_gn_3_138160	Lactuca sativa	HOM05D009585	ORTHO05D000309	1.8e-07	60.1	91	34.1
Peaxi162Scf00320g00217	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.4e-07	59.7	73	42.5
SalBow7G0033	Salvia bowleyana	HOM05D008808	ORTHO05D009453	2.4e-07	59.7	66	40.9
Peaxi162Scf00578g00524	Petunia axillaris	HOM05D001383	ORTHO05D000309	4.1e-07	58.9	86	37.2
SalBow5G4834	Salvia bowleyana	HOM05D058812	ORTHO05D009453	4.1e-07	58.9	64	42.2
SGA_v2.0_scaffold139G35420	Striga asiatica	HOM05D018395	ORTHO05D011912	4.1e-07	58.9	55	47.3
SGA_v2.0_scaffold14G06988	Striga asiatica	HOM05D018395	ORTHO05D011912	4.1e-07	58.9	55	47.3
SGA_v2.0_scaffold223G42854	Striga asiatica	HOM05D018395	ORTHO05D011912	4.1e-07	58.9	55	47.3
SGA_v2.0_scaffold22G09774	Striga asiatica	HOM05D018395	ORTHO05D011912	4.1e-07	58.9	55	47.3
SGA_v2.0_scaffold332G48976	Striga asiatica	HOM05D018395	ORTHO05D011912	4.1e-07	58.9	55	47.3
Lsat_1_v5_gn_3_24321	Lactuca sativa	HOM05D009585	ORTHO05D000309	5.3e-07	58.5	103	33.0
Nitab4.5_0007534g0030	Nicotiana tabacum	HOM05D001883	ORTHO05D002184	5.3e-07	58.5	82	37.8
Peaxi162Scf01021g00121	Petunia axillaris	HOM05D001383	ORTHO05D000309	5.3e-07	58.5	72	40.3
HanXRQChr01g0001121	Helianthus annuus	HOM05D001383	ORTHO05D000309	7.0e-07	58.2	84	36.9
Eucgr.L00906	Eucalyptus grandis	HOM05D015495	ORTHO05D000309	9.1e-07	57.8	90	31.1
Lsat_1_v5_gn_3_72860	Lactuca sativa	HOM05D009585	ORTHO05D000309	9.1e-07	57.8	69	40.6
Peaxi162Scf00084g01219	Petunia axillaris	HOM05D001383	ORTHO05D000309	9.1e-07	57.8	80	40.0
Peaxi162Scf00756g00016	Petunia axillaris	HOM05D001383	ORTHO05D000309	9.1e-07	57.8	76	42.1
SalBow8G4103	Salvia bowleyana	HOM05D008808	ORTHO05D009453	1.2e-06	57.4	149	26.8
Lsat_1_v5_gn_2_57141	Lactuca sativa	HOM05D009585	ORTHO05D000309	1.6e-06	57.0	69	40.6
Peaxi162Scf00039g00714	Petunia axillaris	HOM05D001383	ORTHO05D000309	1.6e-06	57.0	76	42.1
Peaxi162Scf00273g01117	Petunia axillaris	HOM05D001383	ORTHO05D000309	1.6e-06	57.0	66	42.4
Peaxi162Scf00723g00110	Petunia axillaris	HOM05D001383	ORTHO05D000309	1.6e-06	57.0	61	44.3
COL.COLO4_06499	Corchorus olitorius	HOM05D015200	ORTHO05D000309	2.0e-06	56.6	91	37.4
Nitab4.5_0001226g0050	Nicotiana tabacum	HOM05D001883	ORTHO05D002184	2.0e-06	56.6	45	44.4
Peaxi162Scf00002g02917	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.0e-06	56.6	53	49.1
Rhsim03G0135300	Rhododendron simsii	HOM05D010572	ORTHO05D012753	2.0e-06	56.6	123	26.8
SalBow6G6190	Salvia bowleyana	HOM05D008808	ORTHO05D009453	2.0e-06	56.6	122	30.3
SalBow7G3697	Salvia bowleyana	HOM05D008808	ORTHO05D009453	2.0e-06	56.6	76	38.2
Gohir.A10G176350	Gossypium hirsutum	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	69	39.1
Peaxi162Scf00064g02019	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	62	43.5
Peaxi162Scf00171g00022	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	53	43.4
Peaxi162Scf00187g01114	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	76	42.1
Peaxi162Scf00225g00101	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	53	43.4
Peaxi162Scf00699g00025	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	53	43.4
Peaxi162Scf00990g00010	Petunia axillaris	HOM05D001383	ORTHO05D000309	2.6e-06	56.2	53	43.4
SalBow1G0137	Salvia bowleyana	HOM05D008808	ORTHO05D009453	2.6e-06	56.2	73	38.4
SalBow7G4595	Salvia bowleyana	HOM05D009427	ORTHO05D009453	2.6e-06	56.2	108	32.4
Aqoxy7G03573	Aquilegia oxysepala	HOM05D008126	ORTHO05D000309	3.5e-06	55.8	100	32.0
AL6G38890	Arabidopsis lyrata	HOM05D008073	ORTHO05D000309	3.5e-06	55.8	121	28.9
COL.COLO4_15560	Corchorus olitorius	HOM05D015200	ORTHO05D000309	3.5e-06	55.8	89	37.1
Migut.L00955	Erythranthe guttata	HOM05D001383	ORTHO05D000309	3.5e-06	55.8	82	32.9
Gohir.A13G017966	Gossypium hirsutum	HOM05D001383	ORTHO05D000309	3.5e-06	55.8	69	39.1
Lsat_1_v5_gn_6_56121	Lactuca sativa	HOM05D009289	ORTHO05D000309	3.5e-06	55.8	61	39.3
SalBow1G3139	Salvia bowleyana	HOM05D009427	ORTHO05D009453	3.5e-06	55.8	73	39.7
SalBow3G1995	Salvia bowleyana	HOM05D008808	ORTHO05D009453	3.5e-06	55.8	77	39.0
SalBow6G1604	Salvia bowleyana	HOM05D008808	ORTHO05D009453	3.5e-06	55.8	77	39.0
SalBow6G4476	Salvia bowleyana	HOM05D010847	ORTHO05D009453	3.5e-06	55.8	90	34.4
SalBow6G5285	Salvia bowleyana	HOM05D009427	ORTHO05D009453	3.5e-06	55.8	128	32.0
Peaxi162Scf00091g00518	Petunia axillaris	HOM05D001383	ORTHO05D000309	4.5e-06	55.5	76	40.8
Peaxi162Scf00658g00010	Petunia axillaris	HOM05D001383	ORTHO05D000309	4.5e-06	55.5	76	40.8
Peaxi162Scf00795g00012	Petunia axillaris	HOM05D001383	ORTHO05D000309	4.5e-06	55.5	53	43.4
QL02p068827	Quercus lobata	HOM05D007742	ORTHO05D004072	4.5e-06	55.5	42	45.2
SalBow4G2148	Salvia bowleyana	HOM05D008808	ORTHO05D009453	4.5e-06	55.5	68	38.2
SalBow4G2226	Salvia bowleyana	HOM05D008808	ORTHO05D009453	4.5e-06	55.5	68	38.2
SalBow7G0377	Salvia bowleyana	HOM05D008808	ORTHO05D009453	4.5e-06	55.5	69	39.1
SalBow7G0744	Salvia bowleyana	HOM05D008808	ORTHO05D009453	4.5e-06	55.5	69	39.1
SalBow8G4000	Salvia bowleyana	HOM05D008808	ORTHO05D009453	4.5e-06	55.5	69	39.1
Eucgr.G02031	Eucalyptus grandis	HOM05D015495	ORTHO05D000309	5.9e-06	55.1	104	28.8
Gohir.A13G143901	Gossypium hirsutum	HOM05D001383	ORTHO05D000309	5.9e-06	55.1	76	39.5
Hma1.2p1_0048F.1_g028060	Hydrangea macrophylla	HOM05D001383	ORTHO05D000309	5.9e-06	55.1	101	39.6
Lj8P434T2	Lonicera japonica	HOM05D008126	ORTHO05D000309	5.9e-06	55.1	65	36.9
Nitab4.5_0001931g0130	Nicotiana tabacum	HOM05D001883	ORTHO05D002184	5.9e-06	55.1	45	44.4
Nitab4.5_0003017g0010	Nicotiana tabacum	HOM05D001883	ORTHO05D002184	5.9e-06	55.1	84	32.1
BcaB07g33982	Brassica carinata	HOM05D007774	ORTHO05D000309	7.7e-06	54.7	101	31.7
ECA238G1462	Erigeron canadensis	HOM05D012511	ORTHO05D013076	7.7e-06	54.7	101	33.7
Lsat_1_v5_gn_1_95961	Lactuca sativa	HOM05D009585	ORTHO05D000309	7.7e-06	54.7	54	46.3
Lsat_1_v5_gn_4_160641	Lactuca sativa	HOM05D009585	ORTHO05D000309	7.7e-06	54.7	54	46.3
Medtr5g021030	Medicago truncatula	HOM05D001383	ORTHO05D000309	7.7e-06	54.7	96	36.5
Nitab4.5_0002043g0110	Nicotiana tabacum	HOM05D001383	ORTHO05D000309	7.7e-06	54.7	69	34.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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