Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 0.0e+00 1347.0 671 100.0
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 9.5e-292 1006.5 691 74.1
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 7.3e-268 927.2 738 66.8
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.1e-243 845.9 678 64.3
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 4.2e-239 831.6 692 62.7
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 2.0e-233 812.8 677 61.9
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 3.4e-233 812.0 689 62.1
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 5.9e-233 811.2 685 62.0
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 7.6e-233 810.8 670 63.1
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.4e-229 800.0 697 60.5
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.4e-229 800.0 674 61.4
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 1.1e-228 797.0 665 61.8
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 3.3e-228 795.4 672 60.9
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 7.4e-228 794.3 681 60.8
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 3.1e-226 788.9 683 60.3
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 2.6e-225 785.8 667 61.5
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 4.5e-225 785.0 685 58.5
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.0e-224 783.9 672 61.6
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 1.1e-223 780.4 677 60.3
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 8.8e-221 770.8 668 60.3
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 3.3e-220 768.8 670 58.7
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 1.3e-219 766.9 668 59.4
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 2.8e-219 765.8 670 59.0
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 4.8e-219 765.0 665 60.0
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.1e-218 763.8 674 59.8
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.4e-218 762.7 670 59.1
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 2.0e-217 759.6 692 57.5
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 3.8e-216 755.4 670 59.7
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.4e-215 753.4 674 59.8
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 1.4e-215 753.4 687 57.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.9e-215 753.1 683 58.6
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 7.2e-215 751.1 672 59.2
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.0e-213 747.3 684 58.0
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.9e-213 745.3 678 58.3
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 8.8e-213 744.2 681 58.0
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.5e-212 743.4 678 58.1
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 2.6e-212 742.7 676 57.5
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.4e-212 741.1 681 58.9
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 9.7e-212 740.7 680 56.3
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.8e-211 739.2 704 57.4
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.0e-210 734.6 699 56.7
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 5.9e-209 731.5 674 57.1
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 3.8e-208 728.8 722 54.7
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 8.8e-205 717.6 722 54.0
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 1.3e-203 713.8 837 48.7
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 5.9e-201 704.9 660 56.4
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.7e-200 703.4 603 60.5
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.9e-200 702.6 678 55.2
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 5.0e-200 701.8 686 55.0
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 9.4e-199 697.6 692 55.1
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 2.1e-198 696.4 674 55.6
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 2.7e-198 696.0 682 54.1
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 1.0e-197 694.1 674 55.6
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 6.8e-197 691.4 673 55.1
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 6.8e-197 691.4 673 55.1
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 6.8e-197 691.4 673 55.1
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 2.6e-196 689.5 673 54.7
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 4.4e-196 688.7 639 57.0
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 7.5e-196 688.0 691 54.1
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 2.7e-193 679.5 675 53.9
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 3.5e-193 679.1 683 54.5
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 4.5e-193 678.7 672 54.3
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 5.9e-193 678.3 684 53.5
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.9e-191 673.3 680 54.9
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.0e-188 663.3 609 57.6
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 2.6e-188 662.9 677 53.2
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 5.4e-186 655.2 601 58.2
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.2e-185 654.1 672 52.8
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.7e-185 652.9 624 56.6
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.2e-177 627.5 677 50.2
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 1.7e-176 623.6 672 52.8
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 3.4e-172 609.4 580 56.9
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.7e-171 607.1 669 51.0
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 4.9e-171 605.5 671 51.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 5.4e-170 602.1 614 53.4
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 3.0e-168 596.3 667 51.1
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 7.3e-167 591.7 667 51.4
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.8e-166 589.7 674 48.8
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 2.3e-165 586.6 675 50.1
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 8.3e-163 578.2 600 54.2
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 5.6e-159 565.5 675 49.0
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 1.1e-157 561.2 538 55.9
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.8e-157 558.5 671 48.0
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 5.4e-154 548.9 676 46.7
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.2e-153 547.7 675 46.2
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.1e-153 547.0 673 45.9
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.7e-153 546.6 639 46.8
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 9.6e-151 538.1 685 44.5
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 2.0e-148 530.4 503 55.1
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 4.4e-148 529.3 582 52.1
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 2.9e-147 526.6 767 43.2
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.1e-143 514.6 497 54.5
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.5e-140 504.2 523 52.6
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 5.8e-140 502.3 596 50.2
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 1.7e-131 474.2 685 42.5
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 7.1e-122 442.2 679 40.5
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 1.3e-120 438.0 674 40.1
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 1.5e-119 434.5 465 50.3
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 9.0e-117 425.2 660 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 3.4e-116 423.3 677 36.9
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 2.2e-110 404.1 568 43.7
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 9.4e-98 362.1 560 42.3
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 2.3e-96 357.5 458 43.2
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.2e-90 337.0 280 63.9
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.5e-87 328.2 220 72.3
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 6.3e-86 322.8 470 43.2
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 1.8e-85 321.2 521 39.7
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.5e-82 310.8 911 28.4
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.7e-78 298.1 280 56.1
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 4.8e-78 296.6 292 55.1
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 1.9e-74 284.6 420 42.1
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 2.9e-67 260.8 169 74.6
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 6.8e-64 249.6 316 49.1
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.1e-61 242.3 162 74.1
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 1.6e-57 228.4 167 68.3
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 8.9e-56 222.6 186 61.3
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 6.4e-54 216.5 143 74.1
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.1e-53 215.7 135 80.7
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 5.1e-51 206.8 163 66.9
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.1e-49 201.4 174 56.9
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.6e-49 200.7 363 39.1
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.5e-44 184.1 142 64.1
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 3.9e-43 180.6 158 59.5
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 3.9e-43 180.6 175 56.6
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 6.8e-40 169.9 142 62.7
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.2e-39 169.1 139 59.7
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 5.4e-37 160.2 668 25.7
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.3e-35 155.6 143 56.6
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 3.9e-35 154.1 105 67.6
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 5.1e-35 153.7 121 58.7
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 3.6e-33 147.5 142 57.0
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 4.8e-33 147.1 266 33.8
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 1.4e-29 135.6 163 46.0
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 7.9e-28 129.8 254 33.9
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 2.6e-23 114.8 286 32.2
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 1.7e-22 112.1 150 43.3
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 4.9e-22 110.5 90 65.6
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 6.4e-22 110.2 182 39.0
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 3.5e-20 104.4 92 52.2
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 2.3e-19 101.7 55 83.6
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 1.4e-16 92.4 55 74.5
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 5.3e-16 90.5 54 75.9
SHI03974 Sapria himalayana HOM05D004944 ORTHO05D005989 1.4e-13 82.4 152 40.1
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 8.7e-11 73.2 77 44.2
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 1.1e-10 72.8 63 49.2
RcHm_v2.0_Chr2g0114761 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-06 59.3 66 45.5
RcHm_v2.0_Chr5g0078731 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-06 59.3 66 45.5

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (4 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (4 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (5 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (4 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings