Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 3797.3 1998 100.0
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2541.9 2014 67.8
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 2292.7 2018 63.5
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2039.6 2011 57.8
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2023.8 2049 56.0
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2017.7 2016 56.6
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2005.7 2025 55.7
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2005.3 2030 55.6
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2003.8 2025 55.4
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2003.0 2028 55.7
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 1995.7 2013 56.0
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 1991.5 2025 56.1
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1986.8 1667 66.6
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 1936.4 2015 55.8
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 1925.2 2028 54.4
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 1909.8 2033 54.0
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 1906.0 2031 54.2
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 1892.5 2023 53.4
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 1887.1 2029 54.5
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1884.4 1960 55.7
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1882.1 2018 54.6
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1880.1 1912 55.8
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1874.8 1996 54.8
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 1872.1 2028 54.9
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 1865.9 1967 53.8
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 1865.1 2030 54.5
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 1865.1 2048 51.9
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 1861.7 2022 53.6
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 1850.9 2022 53.1
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 1847.4 1857 54.0
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 1838.2 2022 53.6
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 1833.5 2044 53.2
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 1826.6 2042 53.1
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 1808.9 2042 50.8
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 1803.9 2022 51.2
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 1796.6 2119 51.3
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 1788.1 2022 52.5
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 1780.0 2026 51.6
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 1778.5 2029 52.7
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1778.5 2030 51.0
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 1771.9 2021 50.9
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1771.9 1830 53.2
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1770.7 1898 54.5
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 1770.4 2022 51.5
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1767.7 1893 53.9
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 1764.2 2029 51.8
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 1754.6 2026 50.8
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 1751.1 2030 50.3
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 1746.5 2025 50.8
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 1741.1 2019 51.6
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 1739.9 2025 50.2
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 1739.5 2049 50.5
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 1728.0 2023 50.7
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 1726.1 2015 50.4
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 1719.9 2033 50.3
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 1717.2 2050 49.3
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 1711.4 2028 49.7
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 1704.5 2018 50.0
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 1647.1 1966 48.0
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 1645.6 2021 49.3
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1632.5 1927 49.6
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 1624.0 2020 48.3
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1622.1 2002 48.7
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 1618.6 1692 54.4
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1579.3 2112 46.3
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1548.5 2029 47.2
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1458.4 2022 44.4
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1448.3 2019 45.4
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1437.9 2037 45.8
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1406.7 2103 42.9
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1339.3 1762 46.9
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1298.1 1690 47.3
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1272.7 1714 46.8
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1265.8 1822 41.5
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1251.5 1638 43.8
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1218.4 1388 49.2
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1208.4 1715 45.1
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1153.3 1582 46.7
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 1.8e-298 1030.4 2147 36.7
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 9.4e-287 991.5 971 54.7
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 1.7e-272 944.1 1027 53.9
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 4.2e-271 939.5 2101 33.9
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 1.7e-267 927.5 1337 42.3
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.3e-264 917.9 1147 47.8
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.9e-258 897.5 1783 34.8
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 2.3e-256 890.6 1037 47.9
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 1.4e-253 881.3 1123 48.2
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 2.7e-241 840.5 1379 37.9
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 1.5e-207 728.4 783 51.3
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 8.2e-198 696.0 875 45.4
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 6.7e-184 649.8 1458 31.4
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 5.2e-176 623.6 853 43.3
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 6.3e-158 563.5 412 68.4
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 5.4e-157 560.5 2231 26.6
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 1.8e-144 518.8 461 59.2
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 2.4e-120 438.7 347 64.8
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.9e-106 392.5 342 62.0
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 1.8e-104 386.0 344 58.7
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 1.8e-104 386.0 563 48.0
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.6e-92 346.3 348 56.0
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.7e-73 283.1 334 50.6
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 3.1e-64 252.3 379 52.0
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 9.4e-61 240.7 347 49.6
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 1.1e-56 227.3 310 60.0
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 1.8e-56 226.5 262 49.6
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.8e-51 209.9 226 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 2.3e-51 209.5 216 50.5
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 9.8e-50 204.1 243 48.6
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 5.9e-47 194.9 218 48.6
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 5.0e-38 165.2 161 62.1
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.5e-37 163.7 134 59.7
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.2e-36 160.6 161 62.7
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 1.7e-33 150.2 144 64.6
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 1.6e-31 143.7 233 46.8
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 3.5e-31 142.5 338 45.3
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 5.4e-24 118.6 198 39.9
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.5e-23 115.9 96 64.6
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 4.6e-23 115.5 96 64.6
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.5e-21 109.8 372 43.0
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 4.7e-20 105.5 137 46.0
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 1.4e-19 104.0 85 61.2
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 4.0e-19 102.4 225 34.2
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 2.6e-18 99.8 178 45.5
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.4e-16 94.0 91 53.8
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 1.1e-13 84.3 65 58.5
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 4.7e-12 79.0 55 70.9
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 4.0e-11 75.9 144 35.4
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.0e-11 75.9 55 67.3
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 6.8e-11 75.1 64 56.2
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 2.0e-10 73.6 54 68.5
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 4.1e-08 65.9 48 75.0
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 9.2e-08 64.7 55 60.0
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 1.6e-07 63.9 65 53.8
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.6e-07 63.9 51 54.9
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 1.6e-07 63.9 51 54.9
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 7.8e-07 61.6 49 69.4
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 1.3e-06 60.8 39 71.8
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 6.6e-06 58.5 48 56.2

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (4 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (3 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (5 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (2 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (3 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings