Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 5.8e-126 454.5 278 100.0
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 4.0e-95 352.1 238 72.3
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 2.9e-93 345.9 253 69.2
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.4e-92 343.6 233 74.2
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.4e-92 343.6 233 74.2
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.9e-92 343.2 243 69.1
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.4e-92 342.8 252 72.6
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 3.2e-92 342.4 232 72.4
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 4.2e-92 342.0 236 73.3
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 9.3e-92 340.9 236 72.9
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 1.2e-91 340.5 235 72.8
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.6e-91 340.1 250 68.0
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 2.7e-91 339.3 230 70.4
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 6.0e-91 338.2 232 72.8
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 6.0e-91 338.2 234 71.4
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 7.9e-91 337.8 233 70.8
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.0e-90 337.4 246 68.3
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.3e-90 337.0 245 71.0
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 3.0e-90 335.9 230 71.7
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 3.9e-90 335.5 243 68.7
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 8.7e-90 334.3 233 69.1
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.1e-89 334.0 231 70.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.5e-89 333.6 230 71.7
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.9e-89 333.2 245 68.2
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.5e-89 332.8 239 69.5
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.3e-89 332.4 235 68.9
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 4.3e-89 332.0 234 69.2
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 5.6e-89 331.6 239 69.0
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 7.4e-89 331.3 233 69.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 7.4e-89 331.3 237 69.6
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 9.6e-89 330.9 234 71.8
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 9.6e-89 330.9 234 69.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.6e-88 330.1 236 69.5
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.6e-88 330.1 231 69.3
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 2.8e-88 329.3 235 68.9
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.8e-88 328.6 236 69.1
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.8e-88 328.6 234 68.4
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 6.2e-88 328.2 233 68.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.1e-87 327.4 229 70.7
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-87 326.6 208 76.0
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 3.1e-87 325.9 230 70.4
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.2e-86 323.9 235 68.9
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 1.5e-86 323.6 234 67.1
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.0e-86 323.2 229 70.7
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.0e-86 323.2 272 62.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.4e-86 322.4 230 70.0
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 3.4e-86 322.4 232 69.0
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-86 322.0 230 70.4
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-86 322.0 230 70.4
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 4.5e-86 322.0 232 69.0
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 5.8e-86 321.6 255 63.5
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 7.6e-86 321.2 231 69.3
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 7.6e-86 321.2 230 67.4
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 7.6e-86 321.2 233 70.4
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 9.9e-86 320.9 233 66.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.7e-85 320.1 230 67.8
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.7e-85 320.1 267 63.7
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 3.8e-85 318.9 231 67.1
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 6.4e-85 318.2 228 68.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 8.4e-85 317.8 233 67.4
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.1e-84 317.4 243 65.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.1e-84 317.4 201 76.6
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 1.1e-84 317.4 201 76.6
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.1e-84 317.4 232 68.1
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.4e-84 317.0 234 66.7
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.4e-84 317.0 232 67.7
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.4e-84 317.0 232 67.7
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.9e-84 316.6 235 67.2
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.9e-84 316.6 234 68.8
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 3.2e-84 315.8 236 66.1
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 4.2e-84 315.5 230 70.0
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 4.2e-84 315.5 231 70.1
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 4.2e-84 315.5 234 68.4
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 5.5e-84 315.1 231 66.7
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 5.5e-84 315.1 231 69.3
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 5.5e-84 315.1 236 66.1
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 9.3e-84 314.3 234 65.4
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 2.7e-83 312.8 239 64.0
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.9e-83 311.2 227 70.0
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.0e-82 310.8 231 66.2
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.0e-82 310.8 241 63.9
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.0e-82 310.8 239 62.8
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.3e-82 310.5 235 66.4
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.3e-82 310.5 235 66.4
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.8e-82 310.1 231 65.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.3e-82 309.7 233 66.5
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.0e-82 309.3 232 66.8
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.9e-82 308.9 231 65.8
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.9e-82 308.9 230 67.0
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 6.7e-82 308.1 231 66.7
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.1e-81 307.4 298 55.7
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.3e-81 305.4 230 67.0
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.3e-81 305.4 230 67.0
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.3e-81 305.4 230 67.0
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 5.6e-81 305.1 230 67.0
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 7.4e-81 304.7 237 63.7
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 8.2e-80 301.2 312 53.2
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.7e-75 286.2 235 61.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 7.9e-67 258.1 234 53.8
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.5e-65 253.8 173 72.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 2.5e-65 253.1 226 55.3
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.3e-64 250.8 230 57.4
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 8.2e-64 248.1 218 58.7
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.1e-63 245.7 209 62.2
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.3e-63 245.4 163 74.8
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 5.9e-62 241.9 202 58.9
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.0e-58 231.1 245 53.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.5e-54 215.7 215 55.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 2.2e-32 143.7 174 42.0
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 3.1e-31 139.8 190 40.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 2.9e-29 133.3 235 34.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 9.8e-25 118.2 87 67.8
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 8.3e-24 115.2 131 45.0
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 3.2e-23 113.2 305 33.1
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 2.0e-22 110.5 169 40.8
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 7.3e-20 102.1 93 57.0
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 7.0e-15 85.5 93 49.5
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.1e-10 70.1 160 35.0
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 6.0e-06 55.8 109 32.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (0 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (2 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings