Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0224200 Oryza sativa ssp. japonica HOM05D001817 ORTHO05D001647 1.5e-66 256.1 137 100.0
Os11g0222800 Oryza sativa ssp. japonica HOM05D001817 ORTHO05D001647 2.4e-56 222.2 137 88.3
Os11g0224301 Oryza sativa ssp. japonica HOM05D001817 ORTHO05D001647 1.1e-50 203.4 102 96.1
ATR0582G316 Amborella trichopoda HOM05D001817 ORTHO05D001647 4.5e-15 85.1 100 42.0
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.7e-12 75.1 89 41.6
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.7e-12 75.1 94 40.4
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.7e-12 75.1 89 41.6
Hund04268 Selenicereus undatus HOM05D008125 ORTHO05D010359 3.4e-10 68.9 99 34.3
TAR371G0865 Trochodendron aralioides HOM05D001817 ORTHO05D001647 3.4e-10 68.9 102 35.3
ATR0582G157 Amborella trichopoda HOM05D001817 ORTHO05D001647 4.4e-10 68.6 100 34.0
PGR044G0606 Punica granatum HOM05D001817 ORTHO05D001647 4.4e-10 68.6 106 33.0
ATR0582G117 Amborella trichopoda HOM05D001817 ORTHO05D001647 7.5e-10 67.8 90 38.9
MBI07_g02003_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 7.5e-10 67.8 101 37.6
HPP92_021712 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.3e-09 67.0 108 35.2
TWI34G0730 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 2.8e-09 65.9 99 39.4
HPP92_021690 Vanilla planifolia HOM05D001817 ORTHO05D001647 6.3e-09 64.7 88 39.8
TWI63G0410 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 1.1e-08 63.9 86 41.9
TAR629G2934 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.4e-08 63.5 92 33.7
TAR629G0897 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.8e-08 63.2 92 33.7
Sed0003642 Sechium edule HOM05D001817 ORTHO05D001647 3.1e-08 62.4 106 32.1
EL10Ac6g15442 Beta vulgaris HOM05D001817 ORTHO05D001647 4.1e-08 62.0 99 33.3
Thecc.02G154500 Theobroma cacao HOM05D001817 ORTHO05D001647 7.0e-08 61.2 99 33.3
ClCG05G016690 Citrullus lanatus HOM05D001817 ORTHO05D001647 9.1e-08 60.8 85 41.2
FAN27G0609 Fragaria x ananassa HOM05D001817 ORTHO05D001647 9.1e-08 60.8 93 36.6
FAN27G3307 Fragaria x ananassa HOM05D000140 ORTHO05D000087 9.1e-08 60.8 109 32.1
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea HOM05D001817 ORTHO05D001647 1.6e-07 60.1 88 35.2
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea HOM05D001817 ORTHO05D001647 1.6e-07 60.1 88 35.2
CDE05G1510 Ceratophyllum demersum HOM05D000485 ORTHO05D000341 1.6e-07 60.1 92 37.0
Lsat_1_v5_gn_6_115820 Lactuca sativa HOM05D001817 ORTHO05D001647 1.6e-07 60.1 101 34.7
Sed0018471 Sechium edule HOM05D001817 ORTHO05D001647 1.6e-07 60.1 86 36.0
Solyc10g054673.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 1.6e-07 60.1 100 34.0
Atru.chr7.2474 Acer truncatum HOM05D001817 ORTHO05D001647 2.0e-07 59.7 91 34.1
MBI18_g29804_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 2.0e-07 59.7 105 37.1
Solyc10g054677.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 2.0e-07 59.7 100 34.0
CAN.G111.7 Capsicum annuum HOM05D001817 ORTHO05D001647 2.7e-07 59.3 90 31.1
FvH4_2g27480 Fragaria vesca HOM05D001817 ORTHO05D001647 2.7e-07 59.3 95 35.8
FAN15G2483 Fragaria x ananassa HOM05D000140 ORTHO05D000087 2.7e-07 59.3 95 35.8
FAN24G1684 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.7e-07 59.3 91 36.3
FAN24G1722 Fragaria x ananassa HOM05D000140 ORTHO05D000087 2.7e-07 59.3 95 35.8
Lj5g0009014 Lotus japonicus HOM05D001817 ORTHO05D001647 2.7e-07 59.3 89 34.8
Lalb_Chr12g0205721 Lupinus albus HOM05D001817 ORTHO05D001647 2.7e-07 59.3 102 30.4
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 2.7e-07 59.3 101 37.6
Sc06g0000520 Simmondsia chinensis HOM05D001817 ORTHO05D001647 2.7e-07 59.3 115 33.0
Thhalv10026845m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 3.5e-07 58.9 104 34.6
FAN20G0384 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.5e-07 58.9 109 32.1
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 3.5e-07 58.9 102 34.3
Sc03g0006290 Simmondsia chinensis HOM05D001817 ORTHO05D001647 3.5e-07 58.9 100 31.0
ClCG05G016680 Citrullus lanatus HOM05D001817 ORTHO05D001647 4.5e-07 58.5 99 32.3
Gohir.D13G060100 Gossypium hirsutum HOM05D001817 ORTHO05D001647 4.5e-07 58.5 95 32.6
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 4.5e-07 58.5 101 37.6
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 4.5e-07 58.5 101 37.6
CARHR239990 Cardamine hirsuta HOM05D001817 ORTHO05D001647 7.7e-07 57.8 83 39.8
Phvul.007G030200 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 7.7e-07 57.8 100 35.0
Sc03g0006280 Simmondsia chinensis HOM05D001817 ORTHO05D001647 7.7e-07 57.8 92 34.8
Gohir.A13G061900 Gossypium hirsutum HOM05D001817 ORTHO05D001647 1.0e-06 57.4 95 32.6
Phvul.006G043500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.0e-06 57.4 91 36.3
Sp7g29890 Schrenkiella parvula HOM05D001817 ORTHO05D001647 1.0e-06 57.4 84 38.1
CDE06G0004 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 1.3e-06 57.0 100 37.0
Gorai.013G068000 Gossypium raimondii HOM05D001817 ORTHO05D001647 1.3e-06 57.0 95 31.6
Phvul.007G030500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.3e-06 57.0 84 38.1
VMungo0331G0739 Vigna mungo HOM05D001817 ORTHO05D001647 1.3e-06 57.0 107 32.7
Atru.chr7.2473 Acer truncatum HOM05D001817 ORTHO05D001647 1.7e-06 56.6 91 33.0
Carub.0007s0846 Capsella rubella HOM05D001817 ORTHO05D001647 1.7e-06 56.6 107 34.6
CDE02G0050 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 1.7e-06 56.6 100 35.0
MELO3C003721.2 Cucumis melo HOM05D001817 ORTHO05D001647 1.7e-06 56.6 88 33.0
Glyma.13G199700 Glycine max HOM05D001817 ORTHO05D001647 2.3e-06 56.2 104 31.7
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 2.3e-06 56.2 102 31.4
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 2.3e-06 56.2 85 32.9
FvH4_2g28701 Fragaria vesca HOM05D001817 ORTHO05D001647 2.9e-06 55.8 114 33.3
FAN24G3294 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.9e-06 55.8 114 33.3
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.9e-06 55.8 110 32.7
Lj3g0023162 Lotus japonicus HOM05D001817 ORTHO05D001647 2.9e-06 55.8 91 36.3
Phvul.004G057100 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 2.9e-06 55.8 106 28.3
Sp2g10630 Schrenkiella parvula HOM05D001817 ORTHO05D001647 2.9e-06 55.8 118 30.5
Sed0012505 Sechium edule HOM05D001817 ORTHO05D001647 2.9e-06 55.8 84 35.7
THA.LOC104818605 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 2.9e-06 55.8 100 29.0
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 2.9e-06 55.8 97 33.0
VMungo0720G0118 Vigna mungo HOM05D001817 ORTHO05D001647 2.9e-06 55.8 88 34.1
A01p06210 Brassica napus HOM05D001817 ORTHO05D001647 3.8e-06 55.5 84 35.7
CsaV3_3G046170 Cucumis sativus L. HOM05D001817 ORTHO05D001647 3.8e-06 55.5 88 33.0
PSO541G2996 Papaver somniferum HOM05D001817 ORTHO05D001647 3.8e-06 55.5 90 31.1
Sabra09G0098900 Salix brachista HOM05D001817 ORTHO05D001647 3.8e-06 55.5 91 33.0
Sed0003760 Sechium edule HOM05D001817 ORTHO05D001647 3.8e-06 55.5 100 30.0
TPR.G8 Trifolium pratense HOM05D001817 ORTHO05D001647 3.8e-06 55.5 86 34.9
AL7G19800 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 5.0e-06 55.1 84 38.1
BcaC09g51933 Brassica carinata HOM05D000025 ORTHO05D001647 5.0e-06 55.1 84 39.3
A01p06720 Brassica napus HOM05D001817 ORTHO05D001647 5.0e-06 55.1 84 39.3
C01p07480 Brassica napus HOM05D001817 ORTHO05D001647 5.0e-06 55.1 84 39.3
BolC1t00731H Brassica oleracea HOM05D001817 ORTHO05D001647 5.0e-06 55.1 84 39.3
AUR62029426 Chenopodium quinoa HOM05D001817 ORTHO05D001647 5.0e-06 55.1 99 28.3
PSO675G1843 Papaver somniferum HOM05D001817 ORTHO05D001647 5.0e-06 55.1 101 32.7
THA.LOC104818607 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 5.0e-06 55.1 100 28.0
THA.LOC104818611 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 5.0e-06 55.1 100 28.0
MELO3C033004.2 Cucumis melo HOM05D001817 ORTHO05D001647 6.6e-06 54.7 84 35.7
MBI07_g02004_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 6.6e-06 54.7 100 37.0
MD15G1128800 Malus domestica HOM05D001817 ORTHO05D001647 6.6e-06 54.7 85 35.3
Potri.004G167900 Populus trichocarpa HOM05D001817 ORTHO05D001647 6.6e-06 54.7 90 32.2
Dinv24980 Davidia involucrata HOM05D001817 ORTHO05D001647 8.6e-06 54.3 108 32.4
Manes.02G218600 Manihot esculenta HOM05D001817 ORTHO05D001647 8.6e-06 54.3 90 37.8

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (3 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (3 genes)
Brassica oleracea (1 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (2 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (8 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (3 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (2 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (4 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (0 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (2 genes)
Sechium edule (4 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (3 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (6 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (2 genes)
Vigna mungo (2 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings