Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003940g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.5e-94 347.1 160 100.0
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.0e-26 122.5 98 53.1
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-25 119.4 169 40.8
Nitab4.5_0002909g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.6e-25 118.2 96 52.1
Nitab4.5_0010487g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.1e-24 116.3 98 49.0
Nitab4.5_0000087g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.2e-24 114.8 105 50.5
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.1e-24 114.4 195 34.4
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-23 112.8 92 50.0
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.3e-23 111.7 92 54.3
Nitab4.5_0004504g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.9e-23 111.3 96 50.0
Nitab4.5_0000092g0350 Nicotiana tabacum HOM05D000003 ORTHO05D000006 7.6e-22 107.8 152 37.5
Nitab4.5_0001640g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.4e-21 104.4 93 52.7
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-20 102.1 97 46.4
Nitab4.5_0006803g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.1e-19 99.8 80 50.0
Nitab4.5_0002624g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-17 92.8 94 40.4
Nitab4.5_0001360g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-15 87.0 111 39.6
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 5.3e-15 85.1 191 27.2
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.0e-14 83.2 76 48.7
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.4e-14 82.4 69 52.2
Sopen08g015250 Solanum pennellii HOM05D000003 ORTHO05D000006 2.9e-13 79.3 94 35.1
Nitab4.5_0001704g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-12 77.0 157 30.6
Sopen00g005730 Solanum pennellii HOM05D000024 ORTHO05D000006 2.5e-12 76.3 95 34.7
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-12 75.9 100 35.0
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-12 75.9 97 35.1
PGSC0003DMG400033353 Solanum tuberosum HOM05D000024 ORTHO05D000006 3.2e-12 75.9 98 33.7
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.2e-12 75.5 99 37.4
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 7.1e-12 74.7 100 32.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 9.3e-12 74.3 98 32.7
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 9.3e-12 74.3 97 32.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 9.3e-12 74.3 98 32.7
Nitab4.5_0000044g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-11 73.9 98 33.7
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-11 73.9 98 29.6
PGSC0003DMG400029819 Solanum tuberosum HOM05D000003 ORTHO05D000006 1.2e-11 73.9 81 42.0
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-11 73.2 98 30.6
Nitab4.5_0002108g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.7e-11 72.8 61 50.8
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-11 72.4 97 34.0
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-11 72.4 98 30.6
Nitab4.5_0001667g0050 Nicotiana tabacum HOM05D018987 ORTHO05D000006 4.6e-11 72.0 89 43.8
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-11 72.0 99 32.3
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 7.9e-11 71.2 100 31.0
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 7.9e-11 71.2 100 31.0
Nitab4.5_0006303g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.0e-10 70.9 64 51.6
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 1.3e-10 70.5 98 30.6
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 1.3e-10 70.5 99 31.3
Nitab4.5_0000103g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-10 70.1 147 29.3
Nitab4.5_0000151g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.3e-10 69.7 155 31.6
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 2.3e-10 69.7 100 31.0
PGSC0003DMG400045053 Solanum tuberosum HOM05D010618 ORTHO05D000006 2.3e-10 69.7 95 32.6
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 3.0e-10 69.3 99 30.3
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-10 69.3 98 29.6
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-10 69.3 100 33.0
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 8.7e-10 67.8 95 30.5
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 8.7e-10 67.8 97 30.9
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.7e-10 67.8 82 37.8
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.5e-09 66.2 98 32.7
SHI54646 Sapria himalayana HOM05D000024 ORTHO05D000006 4.3e-09 65.5 127 29.9
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 4.3e-09 65.5 98 29.6
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-08 62.8 100 28.0
SHI14601 Sapria himalayana HOM05D000024 ORTHO05D000006 6.3e-08 61.6 103 35.0
Sopen08g016660 Solanum pennellii HOM05D000004 ORTHO05D000034 6.3e-08 61.6 84 42.9
SHI45451 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 60.5 99 33.3
SHI46014 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-07 60.5 103 34.0
SHI47673 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 60.5 99 37.4
SHI55174 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 60.5 103 34.0
SHI46765 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 60.1 99 33.3
SHI42699 Sapria himalayana HOM05D000024 ORTHO05D000006 3.1e-07 59.3 103 28.2
SHI35878 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-07 58.9 103 33.0
SHI33426 Sapria himalayana HOM05D000024 ORTHO05D000006 5.3e-07 58.5 103 33.0
Nitab4.5_0001644g0050 Nicotiana tabacum HOM05D000024 ORTHO05D284143 6.9e-07 58.2 92 35.9
SHI33246 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-07 58.2 106 31.1
SHI35428 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-07 58.2 99 35.4
SHI03655 Sapria himalayana HOM05D000024 ORTHO05D000006 9.0e-07 57.8 101 35.6
SHI31025 Sapria himalayana HOM05D000024 ORTHO05D000006 9.0e-07 57.8 104 32.7
SHI40374 Sapria himalayana HOM05D000024 ORTHO05D000006 9.0e-07 57.8 98 35.7
SHI36021 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 103 33.0
SHI54255 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.4 98 33.7
CAN.G529.35 Capsicum annuum HOM05D000024 ORTHO05D000007 1.5e-06 57.0 49 44.9
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.5e-06 57.0 134 29.9
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.5e-06 57.0 95 29.5
SHI34393 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 100 34.0
SHI45180 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.6 102 32.4
Aqoxy4G01255 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.6e-06 56.2 101 34.7
Nitab4.5_0005334g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.6e-06 56.2 86 43.0
PSO063G2554 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 101 33.7
PSO675G4548 Papaver somniferum HOM05D000003 ORTHO05D000004 2.6e-06 56.2 193 26.9
SHI29734 Sapria himalayana HOM05D000024 ORTHO05D000006 3.4e-06 55.8 98 34.7
SHI32327 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.5 103 30.1
SHI51549 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.5 98 34.7
PSO170G6002 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-06 55.1 101 34.7
PSO302G0114 Papaver somniferum HOM05D000003 ORTHO05D000006 5.9e-06 55.1 119 28.6
SHI35450 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.1 101 35.6
SHI53489 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.1 98 34.7
SHI54458 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.1 100 34.0
SHI34186 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-06 54.7 99 28.3
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-05 54.3 44 50.0
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-05 54.3 46 45.7
SHI08790 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 100 36.0
SHI41166 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 98 29.6
SHI42265 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 101 34.7
SHI43710 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 99 34.3
SHI45047 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 100 35.0
SHI47238 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 98 35.7
SHI47747 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 98 35.7
SHI54187 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 94 34.0
SHI54477 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-05 54.3 94 33.0

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (30 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (4 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (35 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (27 genes)
Solanum tuberosum (7 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings