Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 1.5e-113 412.9 223 100.0
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 1.6e-89 333.2 223 72.6
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 4.1e-82 308.5 223 67.7
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 1.5e-79 300.1 223 64.6
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 2.7e-78 295.8 219 63.9
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 2.7e-78 295.8 219 65.3
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 6.1e-78 294.7 219 63.5
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 1.4e-77 293.5 223 71.3
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 3.0e-77 292.4 219 72.6
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 6.8e-77 291.2 219 72.6
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 6.8e-77 291.2 219 63.9
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 4.4e-76 288.5 219 64.4
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 1.3e-75 287.0 219 62.6
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 6.3e-75 284.6 217 63.1
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 1.2e-73 280.4 219 63.5
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 1.2e-73 280.4 219 69.9
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 2.7e-73 279.3 223 68.2
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 1.7e-72 276.6 219 62.1
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 5.0e-72 275.0 220 60.0
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 5.0e-72 275.0 219 69.4
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 2.8e-70 269.2 215 62.3
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 4.7e-70 268.5 219 60.3
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 4.7e-70 268.5 215 67.9
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 1.0e-69 267.3 209 61.7
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 2.3e-69 266.2 215 60.0
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 3.0e-69 265.8 209 63.2
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 6.8e-69 264.6 214 60.7
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 1.5e-68 263.5 219 58.9
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 7.5e-68 261.2 215 60.0
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 2.2e-67 259.6 208 60.1
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 2.9e-67 259.2 209 61.7
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 4.9e-67 258.5 214 59.3
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 6.4e-67 258.1 217 59.0
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 8.3e-67 257.7 212 60.8
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 1.1e-66 257.3 203 59.6
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 1.4e-66 256.9 216 58.8
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 1.4e-66 256.9 214 59.3
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 1.8e-66 256.5 215 58.6
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 4.1e-66 255.4 213 58.7
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 5.4e-66 255.0 215 58.6
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 7.0e-66 254.6 210 60.0
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 7.0e-66 254.6 217 57.6
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 9.2e-66 254.2 214 58.9
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 9.2e-66 254.2 215 60.9
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 9.2e-66 254.2 215 60.9
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 9.2e-66 254.2 215 60.9
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 9.2e-66 254.2 215 60.9
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 9.2e-66 254.2 215 60.9
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 9.2e-66 254.2 212 58.0
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 1.2e-65 253.8 211 67.8
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 1.2e-65 253.8 214 58.9
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.6e-65 253.4 214 58.4
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 1.6e-65 253.4 212 68.9
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 2.0e-65 253.1 223 57.8
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 2.0e-65 253.1 223 57.8
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 3.5e-65 252.3 209 60.8
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 5.9e-65 251.5 216 66.2
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 5.9e-65 251.5 216 66.2
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 7.8e-65 251.1 211 69.2
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 7.8e-65 251.1 209 67.9
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 7.8e-65 251.1 209 67.9
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 7.8e-65 251.1 217 59.0
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 1.3e-64 250.4 210 67.1
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 1.7e-64 250.0 221 57.9
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 1.7e-64 250.0 221 57.5
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 3.9e-64 248.8 215 65.6
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 5.0e-64 248.4 215 57.7
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 6.6e-64 248.1 218 67.0
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 8.6e-64 247.7 209 66.5
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 8.6e-64 247.7 217 64.5
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 8.6e-64 247.7 211 68.7
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 1.1e-63 247.3 218 58.7
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.9e-63 246.5 212 68.4
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 2.5e-63 246.1 221 55.7
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 2.5e-63 246.1 221 57.0
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 3.3e-63 245.7 212 67.5
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 3.3e-63 245.7 210 56.7
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 4.3e-63 245.4 217 65.9
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 5.6e-63 245.0 210 59.5
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 5.6e-63 245.0 216 56.0
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 5.6e-63 245.0 212 57.5
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 7.3e-63 244.6 221 56.6
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 1.2e-62 243.8 220 65.5
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 1.2e-62 243.8 216 63.9
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 6.2e-62 241.5 220 55.5
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 8.0e-62 241.1 215 56.7
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 8.0e-62 241.1 220 56.4
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 3.1e-61 239.2 213 55.9
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 3.1e-61 239.2 213 55.9
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 4.0e-61 238.8 213 55.9
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 4.0e-61 238.8 216 56.9
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 5.2e-61 238.4 213 55.9
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 1.5e-60 236.9 210 66.2
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.5e-60 236.9 210 67.1
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 2.0e-60 236.5 217 57.6
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 2.0e-60 236.5 210 55.7
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 2.6e-60 236.1 213 54.9
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 2.6e-60 236.1 213 54.9
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 3.4e-60 235.7 213 54.5
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 3.4e-60 235.7 213 54.5
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 5.8e-60 235.0 210 56.2
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 9.8e-60 234.2 210 65.7
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 1.7e-59 233.4 164 67.1
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 4.9e-59 231.9 210 54.8
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 1.1e-58 230.7 221 62.0
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 1.4e-58 230.3 210 56.2
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 5.4e-58 228.4 213 63.4
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 5.4e-58 228.4 213 63.4
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 3.5e-57 225.7 212 54.2
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 2.3e-56 223.0 210 56.7
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 6.6e-56 221.5 183 57.9
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 2.8e-54 216.1 216 51.9
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 6.2e-54 214.9 213 47.9
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 1.8e-53 213.4 210 53.3
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 3.4e-52 209.1 211 61.1
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 2.2e-51 206.5 163 61.3
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 8.3e-51 204.5 219 56.6
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 8.3e-51 204.5 210 48.1
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.9e-50 203.4 212 46.2
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 3.5e-49 199.1 164 59.1
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 6.0e-49 198.4 210 48.6
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 3.0e-48 196.1 214 45.3
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 1.5e-47 193.7 156 62.2
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 1.2e-46 190.7 220 48.2
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 1.6e-46 190.3 163 58.3
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 8.9e-45 184.5 210 57.6
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 3.8e-43 179.1 128 66.4
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 1.3e-40 170.6 216 43.1
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.3e-40 169.9 162 58.6
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 9.6e-39 164.5 134 61.2
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 9.6e-39 164.5 220 52.7
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 8.1e-38 161.4 128 60.2
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 2.2e-35 153.3 129 58.1
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 1.1e-34 151.0 157 50.3
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 1.9e-34 150.2 95 73.7
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 3.5e-33 146.0 210 52.4
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 1.7e-32 143.7 97 70.1
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 3.0e-24 116.3 95 76.8
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 3.4e-12 76.3 199 28.1

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (3 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (6 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings