Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0349701 Helianthus annuus HOM05D004707 ORTHO05D005837 6.5e-151 537.3 268 100.0
HanXRQChr09g0268301 Helianthus annuus HOM05D004707 ORTHO05D005837 3.6e-141 505.0 268 95.9
HanXRQChr17g0534491 Helianthus annuus HOM05D004707 ORTHO05D005837 1.2e-112 410.2 209 96.2
HanXRQChr05g0161201 Helianthus annuus HOM05D015005 ORTHO05D000110 1.2e-43 181.0 123 77.2
HanXRQChr14g0443171 Helianthus annuus HOM05D015005 ORTHO05D000110 1.2e-43 181.0 123 77.2
HanXRQChr16g0520681 Helianthus annuus HOM05D004707 ORTHO05D005837 2.9e-34 149.8 86 86.0
Lsat_1_v5_gn_4_43000 Lactuca sativa HOM05D004707 ORTHO05D005837 1.7e-29 134.0 86 76.7
HanXRQChr14g0439531 Helianthus annuus HOM05D015005 ORTHO05D000110 4.8e-29 132.5 116 65.5
CSS0041396 Camellia sinensis var. sinensis HOM05D004707 ORTHO05D005837 2.9e-26 123.2 86 66.3
Actinidia18541 Actinidia chinensis HOM05D004707 ORTHO05D005837 8.5e-26 121.7 86 67.4
TAR375G0400 Trochodendron aralioides HOM05D004707 ORTHO05D005837 8.5e-26 121.7 86 66.3
GSVIVG01026989001 Vitis vinifera HOM05D004707 ORTHO05D005837 1.1e-25 121.3 86 66.3
Lj9C587T4 Lonicera japonica HOM05D004707 ORTHO05D005837 1.5e-25 120.9 85 69.4
Prupe.2G174600 Prunus persica HOM05D004707 ORTHO05D005837 1.6e-24 117.5 86 61.6
Rhsim01G0164800 Rhododendron simsii HOM05D004707 ORTHO05D005837 2.1e-24 117.1 85 67.1
Ciclev10028150m.g Citrus clementina HOM05D004707 ORTHO05D005837 3.6e-24 116.3 86 61.6
Dinv43847 Davidia involucrata HOM05D004707 ORTHO05D005837 3.6e-24 116.3 86 65.1
Eucgr.D02313 Eucalyptus grandis HOM05D004707 ORTHO05D005837 3.6e-24 116.3 85 62.4
Cc00_g17840 Coffea canephora HOM05D004707 ORTHO05D005837 8.0e-24 115.2 85 65.9
Lalb_Chr04g0259171 Lupinus albus HOM05D004707 ORTHO05D005837 8.0e-24 115.2 86 62.8
SGA_v2.0_scaffold95G28817 Striga asiatica HOM05D004707 ORTHO05D005837 8.0e-24 115.2 86 60.5
ECA234G0026 Erigeron canadensis HOM05D004707 ORTHO05D005837 1.4e-23 114.4 80 67.5
Thecc.01G355200 Theobroma cacao HOM05D004707 ORTHO05D005837 1.8e-23 114.0 86 60.5
Lj3g0007734 Lotus japonicus HOM05D004707 ORTHO05D005837 2.3e-23 113.6 86 62.8
Psat4g156520 Pisum sativum HOM05D004707 ORTHO05D005837 3.0e-23 113.2 85 61.2
CANSAT56G0368 Cannabis sativa HOM05D004707 ORTHO05D005837 4.0e-23 112.8 146 44.5
Atru.chr5.540 Acer truncatum HOM05D004707 ORTHO05D005837 5.2e-23 112.5 86 59.3
Cpa.g.sc11.45 Carica papaya HOM05D004707 ORTHO05D005837 5.2e-23 112.5 86 61.6
MD01G1068400 Malus domestica HOM05D004707 ORTHO05D005837 5.2e-23 112.5 86 58.1
Solyc10g012060.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 5.2e-23 112.5 85 63.5
Sopen10g005800 Solanum pennellii HOM05D004707 ORTHO05D005837 5.2e-23 112.5 85 63.5
THA.LOC104825856 Tarenaya hassleriana HOM05D004707 ORTHO05D005837 5.2e-23 112.5 86 60.5
Glyma.16G033400 Glycine max HOM05D004707 ORTHO05D005837 8.8e-23 111.7 86 58.1
Haze_15544 Corylus avellana HOM05D004707 ORTHO05D005837 1.2e-22 111.3 146 44.5
HanXRQChr06g0173081 Helianthus annuus HOM05D003494 ORTHO05D004033 1.2e-22 111.3 66 80.3
Medtr8g028760 Medicago truncatula HOM05D004707 ORTHO05D005837 1.2e-22 111.3 84 60.7
VMungo0331G0696 Vigna mungo HOM05D004707 ORTHO05D005837 1.2e-22 111.3 86 58.1
Ca_23597_v3 Cicer arietinum L. HOM05D004707 ORTHO05D005837 1.5e-22 110.9 85 58.8
Oeu015224.1 Olea europaea HOM05D004707 ORTHO05D005837 1.5e-22 110.9 86 61.6
CiPaw.01G064900 Carya illinoinensis HOM05D004707 ORTHO05D005837 2.0e-22 110.5 85 57.6
Glyma.07G067400 Glycine max HOM05D004707 ORTHO05D005837 2.0e-22 110.5 80 61.2
Phvul.010G102400 Phaseolus vulgaris HOM05D004707 ORTHO05D005837 2.0e-22 110.5 86 57.0
Sc06g0007250 Simmondsia chinensis HOM05D004707 ORTHO05D005837 2.0e-22 110.5 85 61.2
vmacro20909 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 2.0e-22 110.5 84 63.1
Nitab4.5_0000200g0180 Nicotiana tabacum HOM05D004707 ORTHO05D005837 2.6e-22 110.2 85 61.2
Nitab4.5_0000690g0060 Nicotiana tabacum HOM05D004707 ORTHO05D005837 2.6e-22 110.2 85 61.2
Peaxi162Scf00585g00318 Petunia axillaris HOM05D004707 ORTHO05D005837 2.6e-22 110.2 85 63.5
Lalb_Chr17g0339181 Lupinus albus HOM05D004707 ORTHO05D005837 3.4e-22 109.8 86 58.1
arahy.Tifrunner.gnm1.ann1.HL3201 Arachis hypogaea HOM05D004707 ORTHO05D005837 7.5e-22 108.6 86 59.3
arahy.Tifrunner.gnm1.ann1.YM6R3T Arachis hypogaea HOM05D004707 ORTHO05D005837 7.5e-22 108.6 86 59.3
Nn6g33309 Nelumbo nucifera HOM05D004707 ORTHO05D005837 7.5e-22 108.6 86 58.1
BcaC03g16035 Brassica carinata HOM05D004707 ORTHO05D005837 9.8e-22 108.2 84 63.1
PGR031G2856 Punica granatum HOM05D004707 ORTHO05D005837 9.8e-22 108.2 85 60.0
TWI59G0961 Tripterygium wilfordii HOM05D004707 ORTHO05D005837 1.3e-21 107.8 146 43.8
A02p24040 Brassica napus HOM05D000315 ORTHO05D000527 2.2e-21 107.1 84 61.9
C02p37880 Brassica napus HOM05D000315 ORTHO05D000527 2.2e-21 107.1 84 61.9
BolC2t09805H Brassica oleracea HOM05D004707 ORTHO05D005837 2.2e-21 107.1 84 61.9
BraA02t07399Z Brassica rapa HOM05D000315 ORTHO05D000527 2.2e-21 107.1 84 61.9
Potri.014G088200 Populus trichocarpa HOM05D004707 ORTHO05D005837 2.2e-21 107.1 150 44.0
TPR.G14976 Trifolium pratense HOM05D004707 ORTHO05D005837 2.2e-21 107.1 84 58.3
BcaB01g02199 Brassica carinata HOM05D004707 ORTHO05D005837 2.8e-21 106.7 84 60.7
CAN.G91.14 Capsicum annuum HOM05D004707 ORTHO05D005837 2.8e-21 106.7 85 61.2
RcHm_v2.0_Chr1g0357041 Rosa chinensis HOM05D004707 ORTHO05D005837 2.8e-21 106.7 87 58.6
Hund16663 Selenicereus undatus HOM05D004707 ORTHO05D005837 2.8e-21 106.7 84 59.5
FAN01G2554 Fragaria x ananassa HOM05D004707 ORTHO05D005837 3.7e-21 106.3 87 57.5
FAN06G2758 Fragaria x ananassa HOM05D004707 ORTHO05D005837 3.7e-21 106.3 87 57.5
FAN10G1283 Fragaria x ananassa HOM05D004707 ORTHO05D005837 3.7e-21 106.3 87 57.5
Gohir.D08G043200 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.7e-21 106.3 86 57.0
AT4G00234 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 4.8e-21 105.9 84 63.1
CARHR248350 Cardamine hirsuta HOM05D004707 ORTHO05D005837 6.3e-21 105.5 84 60.7
FvH4_7g15010 Fragaria vesca HOM05D004707 ORTHO05D005837 6.3e-21 105.5 87 57.5
FAN06G3707 Fragaria x ananassa HOM05D004707 ORTHO05D005837 6.3e-21 105.5 87 57.5
FAN10G2784 Fragaria x ananassa HOM05D004707 ORTHO05D005837 6.3e-21 105.5 81 61.7
Potri.002G162100 Populus trichocarpa HOM05D004707 ORTHO05D005837 8.3e-21 105.1 85 61.2
AL6G53230 Arabidopsis lyrata HOM05D004707 ORTHO05D005837 1.1e-20 104.8 84 61.9
AT4G00290 Arabidopsis thaliana HOM05D004707 ORTHO05D005837 1.1e-20 104.8 84 61.9
Thhalv10028609m.g Eutrema salsugineum HOM05D004707 ORTHO05D005837 1.1e-20 104.8 84 61.9
Gohir.D12G111000 Gossypium hirsutum HOM05D004707 ORTHO05D005837 1.1e-20 104.8 85 57.6
Gorai.004G041800 Gossypium raimondii HOM05D004707 ORTHO05D005837 1.1e-20 104.8 86 55.8
FAN03G0218 Fragaria x ananassa HOM05D004707 ORTHO05D005837 1.4e-20 104.4 87 56.3
Gorai.008G120200 Gossypium raimondii HOM05D004707 ORTHO05D005837 1.4e-20 104.4 85 57.6
DCAR_008625 Daucus carota HOM05D001113 ORTHO05D000968 1.8e-20 104.0 85 64.7
Sp6g00340 Schrenkiella parvula HOM05D004707 ORTHO05D005837 1.8e-20 104.0 84 60.7
Carub.0006s3698 Capsella rubella HOM05D004707 ORTHO05D005837 2.4e-20 103.6 84 60.7
Gohir.A08G032300 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.1e-20 103.2 86 54.7
HanXRQChr14g0453371 Helianthus annuus HOM05D004707 ORTHO05D227563 4.1e-20 102.8 132 53.0
Aa31LG5G670 Aethionema arabicum HOM05D004707 ORTHO05D005837 9.1e-20 101.7 85 58.8
COL.COLO4_12751 Corchorus olitorius HOM05D004707 ORTHO05D005837 1.6e-19 100.9 86 54.7
Aqoxy5G00593 Aquilegia oxysepala HOM05D004707 ORTHO05D005837 2.7e-19 100.1 86 53.5
CsaV3_3G008770 Cucumis sativus L. HOM05D004707 ORTHO05D005837 2.7e-19 100.1 86 55.8
Rhsim07G0012400 Rhododendron simsii HOM05D004707 ORTHO05D005837 3.5e-19 99.8 92 52.2
Peaxi162Scf00020g01222 Petunia axillaris HOM05D004707 ORTHO05D005837 5.9e-19 99.0 85 58.8
Solyc10g012050.3 Solanum lycopersicum HOM05D004707 ORTHO05D005837 5.9e-19 99.0 85 55.3
Sopen10g005790 Solanum pennellii HOM05D004707 ORTHO05D005837 5.9e-19 99.0 85 55.3
ATR0661G226 Amborella trichopoda HOM05D004707 ORTHO05D005837 1.0e-18 98.2 86 51.2
MELO3C006094.2 Cucumis melo HOM05D004707 ORTHO05D005837 1.7e-18 97.4 86 54.7
PSO063G6595 Papaver somniferum HOM05D004707 ORTHO05D005837 3.8e-18 96.3 85 52.9
SEGI_13365 Sequoiadendron giganteum HOM05D004707 ORTHO05D005837 3.8e-18 96.3 86 47.7
HPP92_025632 Vanilla planifolia HOM05D004707 ORTHO05D005837 3.8e-18 96.3 86 51.2
Manes.01G254000 Manihot esculenta HOM05D004707 ORTHO05D005837 5.0e-18 95.9 86 53.5
HanXRQChr04g0101491 Helianthus annuus HOM05D021306 ORTHO05D227567 6.6e-18 95.5 62 80.6
Sed0023991 Sechium edule HOM05D004707 ORTHO05D005837 8.6e-18 95.1 86 52.3
HanXRQChr12g0364761 Helianthus annuus HOM05D021306 ORTHO05D000110 1.1e-17 94.7 66 75.8
ClCG05G001380 Citrullus lanatus HOM05D004707 ORTHO05D005837 1.5e-17 94.4 86 51.2
Pp3c10_20950 Physcomitrium patens HOM05D004707 ORTHO05D005837 3.3e-17 93.2 86 46.5
HanXRQChr09g0244171 Helianthus annuus HOM05D001524 ORTHO05D001392 5.5e-17 92.4 61 80.3
HanXRQChr13g0401311 Helianthus annuus HOM05D021306 ORTHO05D225008 5.5e-17 92.4 61 80.3
MBI09_g26550_MAGBIO Magnolia biondii HOM05D004707 ORTHO05D005837 7.2e-17 92.0 86 54.7
HanXRQChr02g0049641 Helianthus annuus HOM05D023464 ORTHO05D000110 1.2e-16 91.3 113 47.8
AUR62022601 Chenopodium quinoa HOM05D004707 ORTHO05D005837 3.6e-16 89.7 84 48.8
Ah.05g180290 Amaranthus hybridus HOM05D004707 ORTHO05D005837 4.7e-16 89.4 84 46.4
HanXRQChr10g0312131 Helianthus annuus HOM05D021306 ORTHO05D220148 4.7e-16 89.4 65 80.0
AUR62004395 Chenopodium quinoa HOM05D004707 ORTHO05D005837 1.4e-15 87.8 84 47.6
Migut.B01788 Erythranthe guttata HOM05D004707 ORTHO05D005837 1.4e-15 87.8 84 50.0
HanXRQChr17g0563851 Helianthus annuus HOM05D000325 ORTHO05D000583 1.8e-15 87.4 53 84.9
EL10Ac1g00374 Beta vulgaris HOM05D004707 ORTHO05D005837 2.3e-15 87.0 84 45.2
Gohir.A12G107750 Gossypium hirsutum HOM05D004707 ORTHO05D005837 3.0e-15 86.7 81 53.1
unitig_749.g14344 Utricularia gibba HOM05D004707 ORTHO05D006649 4.0e-15 86.3 86 44.2
SHI13401 Sapria himalayana HOM05D004707 ORTHO05D005837 6.8e-15 85.5 86 46.5
HanXRQChr01g0029541 Helianthus annuus HOM05D023464 ORTHO05D000110 1.2e-14 84.7 108 45.4
vmacro20907 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 3.4e-14 83.2 85 52.9
unitig_26.g9294 Utricularia gibba HOM05D004707 ORTHO05D005837 7.5e-14 82.0 84 41.7
vmacro13252 Vaccinium macrocarpon HOM05D004707 ORTHO05D005837 7.5e-14 82.0 92 44.6
AagrBONN_evm.TU.Sc2ySwM_344.1481 Anthoceros agrestis HOM05D004707 ORTHO05D005837 1.3e-13 81.3 84 42.9
Os02g0681000 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 1.4e-12 77.8 84 42.9
Zm00001eb073200 Zea mays HOM05D004707 ORTHO05D005837 1.8e-12 77.4 84 42.9
HanXRQChr11g0324571 Helianthus annuus HOM05D004707 ORTHO05D222264 5.4e-12 75.9 76 56.6
Os04g0578700 Oryza sativa ssp. japonica HOM05D004707 ORTHO05D005837 5.4e-12 75.9 76 46.1
SMO116G0175 Selaginella moellendorffii HOM05D004707 ORTHO05D005837 1.2e-11 74.7 86 44.2
Pp3c14_810 Physcomitrium patens HOM05D004707 ORTHO05D005837 1.3e-10 71.2 85 38.8
HanXRQChr15g0464971 Helianthus annuus HOM05D021306 ORTHO05D221185 2.3e-10 70.5 52 73.1
TAR626G0135 Trochodendron aralioides HOM05D004707 ORTHO05D005837 5.0e-10 69.3 54 63.0
HanXRQChr06g0177151 Helianthus annuus HOM05D002934 ORTHO05D001564 5.6e-09 65.9 69 56.5
Mapoly0001s0022 Marchantia polymorpha HOM05D004707 ORTHO05D005837 7.3e-09 65.5 77 36.4
Pp3c15_19020 Physcomitrium patens HOM05D004707 ORTHO05D005837 3.6e-08 63.2 86 34.9
Pp3c9_20150 Physcomitrium patens HOM05D004707 ORTHO05D005837 1.4e-07 61.2 80 35.0
Rhsim05G0021600 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.4e-07 61.2 80 42.5
Rhsim05G0008500 Rhododendron simsii HOM05D004707 ORTHO05D005837 1.8e-07 60.8 80 42.5
HanXRQChr02g0057401 Helianthus annuus HOM05D014775 ORTHO05D222432 9.8e-06 55.1 93 39.8
Rhsim07G0181500 Rhododendron simsii HOM05D004707 ORTHO05D005837 9.8e-06 55.1 76 36.8

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (21 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (1 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (5 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings