Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
HanXRQChr11g0348271	Helianthus annuus	HOM05D003950	ORTHO05D004697	9.6e-37	156.4	82	100.0
HanXRQChr11g0348261	Helianthus annuus	HOM05D003950	ORTHO05D004697	3.0e-30	134.8	78	89.7
HanXRQChr12g0369131	Helianthus annuus	HOM05D000515	ORTHO05D022581	4.6e-15	84.3	47	87.2
HanXRQChr11g0348001	Helianthus annuus	HOM05D003950	ORTHO05D004697	5.1e-14	80.9	74	67.6
HanXRQChr11g0347981	Helianthus annuus	HOM05D003950	ORTHO05D004697	6.7e-14	80.5	80	58.8
HanXRQChr11g0348201	Helianthus annuus	HOM05D003950	ORTHO05D004697	3.3e-13	78.2	65	63.1
Gohir.A08G219600	Gossypium hirsutum	HOM05D003950	ORTHO05D004697	4.3e-13	77.8	78	57.7
Haze_20442	Corylus avellana	HOM05D003950	ORTHO05D004697	2.1e-12	75.5	81	54.3
Lsat_1_v5_gn_1_56021	Lactuca sativa	HOM05D003950	ORTHO05D004697	2.1e-12	75.5	81	55.6
Dinv05569	Davidia involucrata	HOM05D003950	ORTHO05D004697	6.2e-12	73.9	81	53.1
Ciclev10021370m.g	Citrus clementina	HOM05D003950	ORTHO05D004697	1.4e-11	72.8	81	50.6
Hund15115	Selenicereus undatus	HOM05D000185	ORTHO05D000105	1.4e-11	72.8	109	44.0
CARHR268340	Cardamine hirsuta	HOM05D003950	ORTHO05D004697	1.8e-11	72.4	81	50.6
Manes.09G138000	Manihot esculenta	HOM05D003950	ORTHO05D004697	4.0e-11	71.2	81	53.1
COL.COLO4_28614	Corchorus olitorius	HOM05D003950	ORTHO05D004697	6.9e-11	70.5	78	55.1
Dinv25063	Davidia involucrata	HOM05D003950	ORTHO05D004697	6.9e-11	70.5	81	51.9
Hma1.2p1_2382F.1_g321070	Hydrangea macrophylla	HOM05D003950	ORTHO05D004697	6.9e-11	70.5	81	51.9
Lalb_Chr06g0174111	Lupinus albus	HOM05D003950	ORTHO05D004697	9.0e-11	70.1	78	53.8
Rhsim03G0052400	Rhododendron simsii	HOM05D003950	ORTHO05D004697	9.0e-11	70.1	81	51.9
vmacro07558	Vaccinium macrocarpon	HOM05D003950	ORTHO05D004697	9.0e-11	70.1	81	51.9
MD12G1008500	Malus domestica	HOM05D003950	ORTHO05D004697	1.5e-10	69.3	81	50.6
Actinidia03936	Actinidia chinensis	HOM05D003950	ORTHO05D004697	2.0e-10	68.9	81	50.6
arahy.Tifrunner.gnm1.ann1.DJK1GU	Arachis hypogaea	HOM05D003950	ORTHO05D004697	2.0e-10	68.9	78	52.6
Cfa017695	Carpinus fangiana	HOM05D003950	ORTHO05D004697	2.0e-10	68.9	81	50.6
ECA248G3680	Erigeron canadensis	HOM05D003950	ORTHO05D004697	2.0e-10	68.9	81	53.1
MSTRG.26559	Avicennia marina	HOM05D003950	ORTHO05D004697	2.6e-10	68.6	81	49.4
RcHm_v2.0_Chr3g0496431	Rosa chinensis	HOM05D003950	ORTHO05D004697	2.6e-10	68.6	78	50.0
TAR623G1392	Trochodendron aralioides	HOM05D003950	ORTHO05D004697	2.6e-10	68.6	78	51.3
Eucgr.A02129	Eucalyptus grandis	HOM05D003950	ORTHO05D004697	3.4e-10	68.2	81	50.6
Cc06_g17190	Coffea canephora	HOM05D003950	ORTHO05D004697	5.8e-10	67.4	78	52.6
HanXRQChr01g0026431	Helianthus annuus	HOM05D003950	ORTHO05D004697	7.6e-10	67.0	81	51.9
Thecc.05G244400	Theobroma cacao	HOM05D003950	ORTHO05D004697	7.6e-10	67.0	78	52.6
Ca_25687_v3	Cicer arietinum L.	HOM05D003950	ORTHO05D004697	1.0e-09	66.6	78	51.3
Gohir.D08G236500	Gossypium hirsutum	HOM05D003950	ORTHO05D004697	1.0e-09	66.6	78	51.3
Gorai.004G251700	Gossypium raimondii	HOM05D003950	ORTHO05D004697	1.0e-09	66.6	78	51.3
Atru.chr2.1469	Acer truncatum	HOM05D003950	ORTHO05D004697	1.3e-09	66.2	81	48.1
HanXRQChr11g0348521	Helianthus annuus	HOM05D003950	ORTHO05D004697	1.3e-09	66.2	71	60.6
DCAR_016963	Daucus carota	HOM05D003950	ORTHO05D004697	1.7e-09	65.9	81	48.1
Glyma.05G089400	Glycine max	HOM05D003950	ORTHO05D004697	1.7e-09	65.9	78	51.3
GSVIVG01029976001	Vitis vinifera	HOM05D003950	ORTHO05D004697	1.7e-09	65.9	81	48.1
BcaC01g06335	Brassica carinata	HOM05D003950	ORTHO05D004697	2.2e-09	65.5	81	46.9
A03p14340	Brassica napus	HOM05D003950	ORTHO05D004697	2.2e-09	65.5	81	46.9
BraA03t10731Z	Brassica rapa	HOM05D003950	ORTHO05D004697	2.2e-09	65.5	81	46.9
Migut.J00770	Erythranthe guttata	HOM05D003950	ORTHO05D004697	2.2e-09	65.5	78	50.0
SGA_v2.0_scaffold31G12791	Striga asiatica	HOM05D003950	ORTHO05D004697	2.2e-09	65.5	81	49.4
CAN.G959.52	Capsicum annuum	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	50.0
CiPaw.10G125600	Carya illinoinensis	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	51.3
Gohir.A13G164200	Gossypium hirsutum	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	53.8
Nitab4.5_0000121g0060	Nicotiana tabacum	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	50.0
Nitab4.5_0002131g0010	Nicotiana tabacum	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	50.0
Sopen10g028540	Solanum pennellii	HOM05D003950	ORTHO05D004697	2.9e-09	65.1	78	50.0
Thhalv10014237m.g	Eutrema salsugineum	HOM05D003950	ORTHO05D004697	3.8e-09	64.7	80	47.5
Solyc10g076860.2	Solanum lycopersicum	HOM05D003950	ORTHO05D004697	3.8e-09	64.7	78	50.0
Actinidia37803	Actinidia chinensis	HOM05D003950	ORTHO05D004697	5.0e-09	64.3	81	48.1
HanXRQChr11g0347971	Helianthus annuus	HOM05D003950	ORTHO05D004697	6.5e-09	63.9	37	89.2
Sabra19G0049600	Salix brachista	HOM05D003950	ORTHO05D004697	6.5e-09	63.9	82	47.6
Sp6g16940	Schrenkiella parvula	HOM05D003950	ORTHO05D004697	6.5e-09	63.9	81	45.7
C03p16720	Brassica napus	HOM05D003950	ORTHO05D004697	8.4e-09	63.5	81	45.7
Psat1g090600	Pisum sativum	HOM05D003950	ORTHO05D004697	8.4e-09	63.5	78	48.7
MSTRG.10428	Avicennia marina	HOM05D003950	ORTHO05D004697	1.1e-08	63.2	81	48.1
FAN23G1412	Fragaria x ananassa	HOM05D003950	ORTHO05D004697	1.1e-08	63.2	79	48.1
QL07p017761	Quercus lobata	HOM05D003950	ORTHO05D004697	1.1e-08	63.2	71	54.9
AL8G30470	Arabidopsis lyrata	HOM05D003950	ORTHO05D004697	1.4e-08	62.8	81	45.7
BolC3t14092H	Brassica oleracea	HOM05D003950	ORTHO05D004697	1.4e-08	62.8	81	45.7
Carub.0008s1529	Capsella rubella	HOM05D003950	ORTHO05D004697	1.4e-08	62.8	81	45.7
FvH4_1g28440	Fragaria vesca	HOM05D003950	ORTHO05D004697	1.4e-08	62.8	78	47.4
TWI60G1471	Tripterygium wilfordii	HOM05D003950	ORTHO05D004697	1.4e-08	62.8	78	48.7
AT5G55000	Arabidopsis thaliana	HOM05D003950	ORTHO05D004697	1.9e-08	62.4	77	48.1
Duzib177G0442	Durio zibethinus	HOM05D003950	ORTHO05D004697	2.5e-08	62.0	40	72.5
PSO339G3097	Papaver somniferum	HOM05D003950	ORTHO05D004697	2.5e-08	62.0	78	48.7
Medtr6g027790	Medicago truncatula	HOM05D003950	ORTHO05D004697	3.2e-08	61.6	78	48.7
CANSAT78G2427	Cannabis sativa	HOM05D003950	ORTHO05D004697	4.2e-08	61.2	78	47.4
THA.LOC104821454	Tarenaya hassleriana	HOM05D003950	ORTHO05D004697	4.2e-08	61.2	80	47.5
CSS0049440	Camellia sinensis var. sinensis	HOM05D003950	ORTHO05D004697	5.5e-08	60.8	81	44.4
Gorai.013G195400	Gossypium raimondii	HOM05D003950	ORTHO05D004697	5.5e-08	60.8	76	48.7
Prupe.7G009900	Prunus persica	HOM05D003950	ORTHO05D004697	1.6e-07	59.3	70	51.4
Phvul.004G074000	Phaseolus vulgaris	HOM05D003950	ORTHO05D004697	2.7e-07	58.5	78	48.7
Sabra13G0055700	Salix brachista	HOM05D003950	ORTHO05D004697	3.5e-07	58.2	137	31.4
RcHm_v2.0_Chr5g0074451	Rosa chinensis	HOM05D003950	ORTHO05D004697	4.6e-07	57.8	74	47.3
VMungo0464G0013	Vigna mungo	HOM05D003950	ORTHO05D004697	4.6e-07	57.8	78	47.4
PSO384G0364	Papaver somniferum	HOM05D003950	ORTHO05D004697	6.1e-07	57.4	40	67.5
Sed0018840	Sechium edule	HOM05D003950	ORTHO05D004697	6.1e-07	57.4	78	47.4
FAN11G2374	Fragaria x ananassa	HOM05D003950	ORTHO05D004697	1.3e-06	56.2	71	43.7
MELO3C008816.2	Cucumis melo	HOM05D003950	ORTHO05D004697	1.8e-06	55.8	78	46.2
Potri.019G038400	Populus trichocarpa	HOM05D003950	ORTHO05D004697	3.9e-06	54.7	81	43.2
Gohir.A07G127733	Gossypium hirsutum	HOM05D003950	ORTHO05D004697	5.1e-06	54.3	40	67.5
CDE06G0557	Ceratophyllum demersum	HOM05D003950	ORTHO05D004697	6.7e-06	53.9	78	39.7
CsaV3_4G012140	Cucumis sativus L.	HOM05D003950	ORTHO05D004697	6.7e-06	53.9	78	44.9
TPR.G29869	Trifolium pratense	HOM05D003950	ORTHO05D004697	6.7e-06	53.9	70	50.0
ClCG04G005440	Citrullus lanatus	HOM05D003950	ORTHO05D004697	8.7e-06	53.5	78	44.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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