Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
HanXRQChr11g0344511	Helianthus annuus	HOM05D003684	ORTHO05D004428	4.2e-21	104.0	61	100.0
HanXRQChr01g0009441	Helianthus annuus	HOM05D003684	ORTHO05D004428	5.1e-19	97.1	60	93.3
HanXRQChr11g0336971	Helianthus annuus	HOM05D003684	ORTHO05D004428	8.2e-17	89.7	62	91.9
ECA248G2431	Erigeron canadensis	HOM05D003684	ORTHO05D004428	9.4e-13	76.3	60	80.0
Lsat_1_v5_gn_1_130380	Lactuca sativa	HOM05D003684	ORTHO05D004428	5.3e-08	60.5	33	75.8
Ciclev10024915m.g	Citrus clementina	HOM05D003684	ORTHO05D004428	1.5e-07	58.9	33	75.8
Ciclev10026566m.g	Citrus clementina	HOM05D003684	ORTHO05D004428	1.5e-07	58.9	33	75.8
arahy.Tifrunner.gnm1.ann1.XFQ1DZ	Arachis hypogaea	HOM05D003684	ORTHO05D004428	2.0e-07	58.5	33	72.7
Thhalv10012626m.g	Eutrema salsugineum	HOM05D003684	ORTHO05D004428	2.0e-07	58.5	53	54.7
Sp6g34450	Schrenkiella parvula	HOM05D003684	ORTHO05D004428	2.6e-07	58.2	33	72.7
THA.LOC104800528	Tarenaya hassleriana	HOM05D003684	ORTHO05D004428	2.6e-07	58.2	33	69.7
BcaB01g05594	Brassica carinata	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	33	72.7
A03p03860	Brassica napus	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	33	72.7
C03p04350	Brassica napus	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	33	72.7
BolC3t12968H	Brassica oleracea	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	33	72.7
BraA03t09733Z	Brassica rapa	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	33	72.7
THA.LOC104818396	Tarenaya hassleriana	HOM05D003684	ORTHO05D004428	3.4e-07	57.8	32	71.9
Lj2C616G3	Lonicera japonica	HOM05D003684	ORTHO05D004428	4.5e-07	57.4	33	75.8
Actinidia36575	Actinidia chinensis	HOM05D003684	ORTHO05D004428	7.7e-07	56.6	33	72.7
AL6G19100	Arabidopsis lyrata	HOM05D003684	ORTHO05D004428	7.7e-07	56.6	59	52.5
TPR.G40356	Trifolium pratense	HOM05D003684	ORTHO05D004428	7.7e-07	56.6	33	69.7
vmacro12735	Vaccinium macrocarpon	HOM05D003684	ORTHO05D004428	7.7e-07	56.6	57	50.9
AL6G18920	Arabidopsis lyrata	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	59	52.5
BcaB08g37259	Brassica carinata	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	69.7
C09p68560	Brassica napus	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	69.7
BraA10t44878Z	Brassica rapa	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	69.7
CSS0049380	Camellia sinensis var. sinensis	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	57	50.9
CARHR204550	Cardamine hirsuta	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	59	52.5
COL.COLO4_36995	Corchorus olitorius	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	72.7
FAN23G1204	Fragaria x ananassa	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	55	47.3
FAN28G1615	Fragaria x ananassa	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	55	47.3
MBI01_g42406_MAGBIO	Magnolia biondii	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	72.7
Thecc.07G170900	Theobroma cacao	HOM05D003684	ORTHO05D004428	1.0e-06	56.2	33	72.7
AT5G08450	Arabidopsis thaliana	HOM05D003684	ORTHO05D004428	1.3e-06	55.8	59	52.5
Duzib187G1616	Durio zibethinus	HOM05D003684	ORTHO05D004428	1.3e-06	55.8	33	72.7
Duzib213G0690	Durio zibethinus	HOM05D003684	ORTHO05D004428	1.3e-06	55.8	33	72.7
unitig_736.g22645	Utricularia gibba	HOM05D003684	ORTHO05D004428	1.3e-06	55.8	33	63.6
arahy.Tifrunner.gnm1.ann1.554WMS	Arachis hypogaea	HOM05D003684	ORTHO05D004428	1.7e-06	55.5	33	66.7
arahy.Tifrunner.gnm1.ann1.88FPG1	Arachis hypogaea	HOM05D003684	ORTHO05D004428	1.7e-06	55.5	33	66.7
ClCG02G000160	Citrullus lanatus	HOM05D003684	ORTHO05D004428	1.7e-06	55.5	33	69.7
CsaV3_2G019660	Cucumis sativus L.	HOM05D003684	ORTHO05D004428	1.7e-06	55.5	33	69.7
Sed0026164	Sechium edule	HOM05D003684	ORTHO05D004428	1.7e-06	55.5	33	69.7
Dinv26831	Davidia involucrata	HOM05D003684	ORTHO05D004428	2.2e-06	55.1	32	75.0
unitig_899.g14642	Utricularia gibba	HOM05D003684	ORTHO05D004428	2.2e-06	55.1	33	63.6
Atru.chr3.1442	Acer truncatum	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Aa31LG3G18080	Aethionema arabicum	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	66.7
Cfa020930	Carpinus fangiana	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Glyma.20G214600	Glycine max	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Gohir.A01G097200	Gossypium hirsutum	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Gorai.002G106900	Gossypium raimondii	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Rhsim10G0125000	Rhododendron simsii	HOM05D003684	ORTHO05D004428	2.9e-06	54.7	33	69.7
Aqoxy5G02639	Aquilegia oxysepala	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	66.7
Carub.0006s0737	Capsella rubella	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	53	50.9
Lj5g0014818	Lotus japonicus	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	69.7
Medtr1g077090	Medicago truncatula	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	69.7
Potri.018G145560	Populus trichocarpa	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	66.7
Potri.T044700	Populus trichocarpa	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	66.7
Sabra04G0082300	Salix brachista	HOM05D003684	ORTHO05D004428	3.8e-06	54.3	33	66.7
DCAR_009623	Daucus carota	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	33	63.6
FvH4_1g25880	Fragaria vesca	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	55	45.5
FAN19G3168	Fragaria x ananassa	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	55	45.5
FAN26G1029	Fragaria x ananassa	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	55	45.5
Glyma.09G157300	Glycine max	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	53	52.8
Glyma.16G207900	Glycine max	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	33	69.7
Lalb_Chr02g0149761	Lupinus albus	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	33	66.7
Potri.004G135800	Populus trichocarpa	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	33	63.6
RcHm_v2.0_Chr3g0485021	Rosa chinensis	HOM05D003684	ORTHO05D004428	5.0e-06	53.9	60	43.3
Glyma.10G175900	Glycine max	HOM05D003684	ORTHO05D004428	6.5e-06	53.5	33	66.7
Lj2g0008338	Lotus japonicus	HOM05D003684	ORTHO05D004428	6.5e-06	53.5	55	45.5
Medtr6g065070	Medicago truncatula	HOM05D003684	ORTHO05D004428	6.5e-06	53.5	55	49.1
Sabra19G0000700	Salix brachista	HOM05D003684	ORTHO05D004428	6.5e-06	53.5	32	68.8
Sabra19G0012100	Salix brachista	HOM05D003684	ORTHO05D004428	6.5e-06	53.5	32	68.8
CDE02G3840	Ceratophyllum demersum	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	66.7
CDE08G0027	Ceratophyllum demersum	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	66.7
Ca_09907_v3	Cicer arietinum L.	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	66.7
Lalb_Chr06g0168741	Lupinus albus	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	66.7
Lalb_Chr21g0311771	Lupinus albus	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	57	43.9
MBI03_g18673_MAGBIO	Magnolia biondii	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	32	71.9
Oeu034404.1	Olea europaea	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	63.6
Peaxi162Scf00353g00740	Petunia axillaris	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	54	48.1
Psat6g111880	Pisum sativum	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	57	45.6
Hund21769	Selenicereus undatus	HOM05D003684	ORTHO05D004428	8.5e-06	53.1	33	66.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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