Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 0.0e+00 1552.7 837 100.0
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 0.0e+00 1194.9 831 77.0
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 0.0e+00 1186.0 841 78.4
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 6.1e-288 994.2 842 68.6
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 1.1e-284 983.4 836 66.5
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 1.2e-283 979.9 840 66.5
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 4.2e-281 971.5 833 65.4
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 9.7e-278 960.3 833 64.7
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 6.3e-277 957.6 842 65.0
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 4.1e-276 954.9 845 63.7
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 5.3e-276 954.5 853 64.7
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 2.9e-274 948.7 845 63.1
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 8.5e-274 947.2 850 61.6
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 3.6e-272 941.8 839 62.7
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 1.8e-271 939.5 835 63.5
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 3.0e-271 938.7 840 62.6
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 4.0e-271 938.3 837 63.0
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 8.8e-271 937.2 843 63.3
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 1.5e-270 936.4 839 62.6
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 2.0e-270 936.0 839 62.6
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 3.4e-270 935.3 844 61.4
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 2.2e-269 932.6 840 63.6
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 6.3e-269 931.0 834 63.3
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 7.0e-268 927.5 835 63.4
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 7.0e-268 927.5 842 62.2
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 9.1e-268 927.2 841 60.2
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 3.5e-267 925.2 839 61.3
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 3.5e-267 925.2 833 61.2
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 3.5e-267 925.2 838 61.5
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 5.9e-267 924.5 842 60.3
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 1.0e-266 923.7 839 60.9
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 2.9e-266 922.2 844 61.4
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 6.5e-266 921.0 841 59.9
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 8.6e-266 920.6 845 60.2
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 1.9e-265 919.5 842 61.0
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 1.9e-265 919.5 838 61.9
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 2.5e-265 919.1 839 60.4
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 4.2e-265 918.3 836 62.1
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 1.2e-264 916.8 839 61.0
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 2.1e-264 916.0 836 59.9
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 2.1e-264 916.0 835 60.1
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 2.0e-262 909.4 840 60.2
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 2.6e-262 909.1 841 59.5
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 2.6e-262 909.1 862 61.1
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 3.4e-262 908.7 847 61.3
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 4.4e-262 908.3 843 60.1
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 7.5e-262 907.5 839 61.3
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.7e-261 906.4 837 60.1
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 2.8e-261 905.6 840 60.0
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 3.7e-261 905.2 838 60.0
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 1.1e-260 903.7 838 60.6
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 4.1e-260 901.7 839 58.6
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 1.2e-259 900.2 833 59.9
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 2.7e-259 899.0 836 59.9
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 3.5e-259 898.7 840 59.0
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 7.8e-259 897.5 846 59.2
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 5.0e-258 894.8 842 60.6
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 1.8e-255 886.3 843 59.5
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 1.8e-255 886.3 843 58.6
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 3.7e-253 878.6 843 59.9
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 8.6e-250 867.5 838 59.4
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 3.3e-249 865.5 843 58.8
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 5.6e-249 864.8 836 58.7
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 1.2e-248 863.6 878 57.2
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 4.4e-246 855.1 835 58.9
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.1e-244 850.5 843 58.2
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 1.9e-244 849.7 844 58.5
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 3.5e-243 845.5 843 57.8
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 1.1e-241 840.5 847 59.6
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 1.2e-240 837.0 935 53.4
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 4.4e-238 828.6 835 58.6
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 1.3e-237 827.0 845 58.5
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 4.6e-235 818.5 837 53.5
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 7.8e-235 817.8 851 56.2
BolC6t40319H Brassica oleracea HOM05D004092 ORTHO05D005448 1.5e-233 813.5 829 55.5
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 2.5e-233 812.8 837 61.1
BcaC08g47477 Brassica carinata HOM05D004092 ORTHO05D005448 3.3e-233 812.4 834 55.4
C06p53020 Brassica napus HOM05D004092 ORTHO05D005448 3.3e-233 812.4 834 55.4
A07p44270 Brassica napus HOM05D004092 ORTHO05D005448 1.2e-232 810.4 839 56.1
BraA07t31936Z Brassica rapa HOM05D004092 ORTHO05D005448 1.2e-232 810.4 839 56.1
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 1.2e-232 810.4 844 54.4
Carub.0002s2602 Capsella rubella HOM05D004092 ORTHO05D005448 1.6e-232 810.1 826 54.6
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 3.1e-231 805.8 833 54.9
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 4.0e-231 805.4 790 59.1
CARHR072800 Cardamine hirsuta HOM05D004092 ORTHO05D005448 3.4e-230 802.4 847 54.0
AT1G79150 Arabidopsis thaliana HOM05D004092 ORTHO05D005448 8.4e-229 797.7 845 53.7
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 1.1e-228 797.3 843 54.1
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 1.5e-225 786.9 855 51.9
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 4.3e-225 785.4 853 52.5
AL2G39620 Arabidopsis lyrata HOM05D004092 ORTHO05D005448 7.3e-225 784.6 829 53.6
BcaB02g08669 Brassica carinata HOM05D004092 ORTHO05D005448 9.9e-222 774.2 841 54.2
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 3.9e-218 762.3 832 54.3
Zm00001eb020130 Zea mays HOM05D004092 ORTHO05D005448 3.2e-212 742.7 843 51.6
BcaNung04898 Brassica carinata HOM05D004092 ORTHO05D005448 5.8e-206 721.8 677 57.6
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 3.2e-204 716.1 843 52.3
Os06g0498500 Oryza sativa ssp. japonica HOM05D004092 ORTHO05D005448 7.1e-204 714.9 810 52.1
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 6.0e-203 711.8 840 49.5
Thhalv10018125m.g Eutrema salsugineum HOM05D004092 ORTHO05D005448 3.3e-201 706.1 694 56.8
Sp5g34210 Schrenkiella parvula HOM05D004092 ORTHO05D005448 1.8e-194 683.7 614 59.3
SEGI_30171 Sequoiadendron giganteum HOM05D004092 ORTHO05D005448 3.0e-194 682.9 851 47.2
Phvul.L001940 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 5.3e-183 645.6 550 63.1
unitig_32.g11083 Utricularia gibba HOM05D004092 ORTHO05D005448 7.9e-179 631.7 612 61.8
Rhsim04G0123500 Rhododendron simsii HOM05D004092 ORTHO05D005448 2.9e-173 613.2 618 59.7
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis HOM05D004092 ORTHO05D005448 4.8e-152 542.7 867 42.0
CAN.G101.16 Capsicum annuum HOM05D004092 ORTHO05D005448 1.2e-150 538.1 454 62.8
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 3.0e-138 496.9 797 42.2
Pp3c3_9760 Physcomitrium patens HOM05D004092 ORTHO05D005448 1.1e-135 488.4 895 39.2
SMO169G0313 Selaginella moellendorffii HOM05D004092 ORTHO05D005448 1.6e-131 474.6 841 39.7
RhsimUnG0180500 Rhododendron simsii HOM05D004092 ORTHO05D005448 6.4e-128 462.6 498 59.0
Cpa.g.sc4.30 Carica papaya HOM05D004092 ORTHO05D005448 1.2e-126 458.4 372 63.4
Hma1.2p1_0334F.1_g128560 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 6.4e-112 409.5 456 58.6
FAN21G2977 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.1e-111 408.7 395 59.2
CBR_g30814 Chara braunii HOM05D004092 ORTHO05D005448 3.0e-109 400.6 641 39.0
Eucgr.G02299 Eucalyptus grandis HOM05D004092 ORTHO05D005448 1.1e-106 392.1 430 53.0
Rhsim04G0004800 Rhododendron simsii HOM05D004092 ORTHO05D005448 2.4e-106 391.0 308 66.2
Sopen00g013080 Solanum pennellii HOM05D004092 ORTHO05D005448 1.1e-98 365.5 289 66.1
SHI21021 Sapria himalayana HOM05D004092 ORTHO05D005448 2.6e-89 334.3 454 45.8
CAN.G101.17 Capsicum annuum HOM05D004092 ORTHO05D005448 9.6e-84 315.8 339 57.2
Eucgr.F00934 Eucalyptus grandis HOM05D004092 ORTHO05D005448 7.9e-78 296.2 336 50.9
Haze_01706 Corylus avellana HOM05D004092 ORTHO05D005448 8.7e-77 292.7 233 64.4
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 8.7e-77 292.7 233 63.9
Sopen00g010230 Solanum pennellii HOM05D004092 ORTHO05D005448 6.9e-74 283.1 200 72.0
Haze_01704 Corylus avellana HOM05D004092 ORTHO05D005448 4.5e-73 280.4 292 60.6
MCO10G157 Micromonas commoda HOM05D004092 ORTHO05D005448 5.1e-69 266.9 829 30.2
Haze_01705 Corylus avellana HOM05D004092 ORTHO05D005448 1.5e-68 265.4 227 58.1
Lsat_1_v5_gn_2_21921 Lactuca sativa HOM05D004092 ORTHO05D005448 1.0e-64 252.7 157 80.9
SHI21022 Sapria himalayana HOM05D004092 ORTHO05D005448 3.3e-60 237.7 195 62.1
PGR138G0002 Punica granatum HOM05D004092 ORTHO05D005448 2.9e-56 224.6 276 53.6
unitig_32.g11084 Utricularia gibba HOM05D004092 ORTHO05D005448 1.4e-55 222.2 212 55.7
Phvul.011G073301 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 6.1e-46 190.3 182 54.9
SalBow7G2721 Salvia bowleyana HOM05D004092 ORTHO05D005448 1.2e-44 186.0 153 62.1
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 4.4e-44 184.1 214 49.5
Psat1g207400 Pisum sativum HOM05D004092 ORTHO05D005448 1.8e-37 162.2 172 52.9
Rhsim04G0004600 Rhododendron simsii HOM05D004092 ORTHO05D005448 2.2e-35 155.2 157 61.1
SalBow1G6550 Salvia bowleyana HOM05D004092 ORTHO05D005448 2.4e-34 151.8 179 48.6
Sopen00g012990 Solanum pennellii HOM05D004092 ORTHO05D005448 4.1e-34 151.0 152 51.3
PRCOL_00003431 Prasinoderma coloniale HOM05D004092 ORTHO05D005448 2.8e-30 138.3 648 25.6
BolC6t38166H Brassica oleracea HOM05D004092 ORTHO05D005448 4.4e-28 131.0 283 37.5
Actinidia37125 Actinidia chinensis HOM05D004092 ORTHO05D005448 9.8e-28 129.8 114 63.2
C06p30050 Brassica napus HOM05D004092 ORTHO05D005448 7.0e-26 123.6 285 35.8
BcaC08g45374 Brassica carinata HOM05D004092 ORTHO05D005448 7.8e-25 120.2 292 34.9
Cre16.g659600 Chlamydomonas reinhardtii HOM05D004092 ORTHO05D005448 1.3e-24 119.4 575 23.3
Glyma.11G148802 Glycine max HOM05D004092 ORTHO05D016651 1.3e-24 119.4 105 59.0
Cfa022337 Carpinus fangiana HOM05D004092 ORTHO05D005448 6.6e-24 117.1 597 25.1
Cpa.g.sc2160.2 Carica papaya HOM05D004092 ORTHO05D005448 6.1e-22 110.5 71 69.0
Actinidia37124 Actinidia chinensis HOM05D004092 ORTHO05D005448 3.4e-20 104.8 76 68.4
BcaB02g07203 Brassica carinata HOM05D004092 ORTHO05D005448 7.5e-20 103.6 118 50.0
Rhsim04G0004900 Rhododendron simsii HOM05D004092 ORTHO05D005448 4.3e-15 87.8 55 80.0
Sopen00g013090 Solanum pennellii HOM05D004092 ORTHO05D005448 6.2e-14 84.0 105 51.4
A07p27270 Brassica napus HOM05D004092 ORTHO05D005448 1.1e-13 83.2 197 42.1
Phvul.L001640 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 4.4e-12 77.8 59 62.7
ECA232G3953 Erigeron canadensis HOM05D015936 ORTHO05D022524 5.8e-12 77.4 62 66.1
BraA07t30370Z Brassica rapa HOM05D004092 ORTHO05D005448 9.8e-12 76.6 200 40.5
AL4G15030 Arabidopsis lyrata HOM05D001020 ORTHO05D001137 8.3e-11 73.6 197 39.1
arahy.Tifrunner.gnm1.ann1.83PK1U Arachis hypogaea HOM05D004092 ORTHO05D016651 8.3e-11 73.6 95 47.4
QL04p079914 Quercus lobata HOM05D004092 ORTHO05D005448 1.9e-10 72.4 55 61.8
ECA232G0241 Erigeron canadensis HOM05D004092 ORTHO05D005448 1.5e-07 62.8 78 46.2
Actinidia37123 Actinidia chinensis HOM05D004092 ORTHO05D005448 1.2e-06 59.7 122 39.3

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (4 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (3 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (5 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (3 genes)
Rhododendron simsii (6 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (5 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (4 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings