Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I00848 Eucalyptus grandis HOM05D000896 ORTHO05D000594 7.3e-124 447.2 221 100.0
Eucgr.I00811 Eucalyptus grandis HOM05D000896 ORTHO05D000594 3.2e-103 378.6 261 76.2
Eucgr.I00818 Eucalyptus grandis HOM05D000896 ORTHO05D000594 4.5e-57 225.3 243 55.1
Eucgr.I00861 Eucalyptus grandis HOM05D000896 ORTHO05D000594 2.0e-44 183.3 193 55.4
Eucgr.I00855 Eucalyptus grandis HOM05D000896 ORTHO05D000594 1.6e-38 163.7 117 70.1
Eucgr.B00728 Eucalyptus grandis HOM05D000896 ORTHO05D000594 5.6e-31 138.7 141 51.1
Eucgr.B00726 Eucalyptus grandis HOM05D000896 ORTHO05D000594 1.4e-29 134.0 141 48.2
Eucgr.L00710 Eucalyptus grandis HOM05D000896 ORTHO05D000594 5.4e-18 95.5 100 52.0
Duzib251G0081 Durio zibethinus HOM05D000896 ORTHO05D000594 4.3e-15 85.9 178 31.5
Manes.09G155401 Manihot esculenta HOM05D000896 ORTHO05D000594 2.8e-14 83.2 185 36.8
Cfa004783 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.1e-14 81.6 183 37.2
Cfa004785 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.9e-13 78.2 160 38.1
Thecc.03G196900 Theobroma cacao HOM05D000896 ORTHO05D000594 1.2e-12 77.8 150 33.3
Manes.09G146800 Manihot esculenta HOM05D000896 ORTHO05D000594 2.6e-12 76.6 175 36.0
arahy.Tifrunner.gnm1.ann1.K5WR0Q Arachis hypogaea HOM05D011529 ORTHO05D000594 4.4e-12 75.9 144 35.4
Cfa004691 Carpinus fangiana HOM05D000896 ORTHO05D000594 4.4e-12 75.9 200 31.0
Sabra15G0011700 Salix brachista HOM05D000896 ORTHO05D000594 4.4e-12 75.9 171 33.9
Cfa004709 Carpinus fangiana HOM05D000896 ORTHO05D000594 7.6e-12 75.1 200 31.0
Cfa004784 Carpinus fangiana HOM05D000896 ORTHO05D000594 9.9e-12 74.7 140 38.6
Manes.15G190800 Manihot esculenta HOM05D000896 ORTHO05D000594 9.9e-12 74.7 162 32.1
Potri.015G014700 Populus trichocarpa HOM05D000896 ORTHO05D000594 1.3e-11 74.3 162 33.3
Gohir.D11G314050 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.8e-11 72.8 128 33.6
Potri.015G014200 Populus trichocarpa HOM05D000896 ORTHO05D000594 3.8e-11 72.8 163 32.5
arahy.Tifrunner.gnm1.ann1.TNG32Q Arachis hypogaea HOM05D011529 ORTHO05D000594 4.9e-11 72.4 144 34.7
FAN12G0984 Fragaria x ananassa HOM05D000896 ORTHO05D000594 4.9e-11 72.4 154 34.4
Gohir.A13G226166 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.9e-11 72.4 128 32.8
Thecc.03G197000 Theobroma cacao HOM05D000896 ORTHO05D000594 4.9e-11 72.4 150 33.3
Actinidia39404 Actinidia chinensis HOM05D000896 ORTHO05D000594 8.4e-11 71.6 144 31.2
Gohir.A02G048201 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.4e-11 71.6 175 30.3
DCAR_008698 Daucus carota HOM05D000896 ORTHO05D000594 1.1e-10 71.2 142 33.8
Phvul.010G000400 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 1.1e-10 71.2 146 30.8
Thecc.10G130700 Theobroma cacao HOM05D000896 ORTHO05D000594 1.1e-10 71.2 140 32.9
COL.COLO4_02946 Corchorus olitorius HOM05D000896 ORTHO05D000594 1.4e-10 70.9 144 35.4
Duzib251G0257 Durio zibethinus HOM05D000896 ORTHO05D000594 1.9e-10 70.5 158 31.0
Duzib251G0772 Durio zibethinus HOM05D000896 ORTHO05D000594 1.9e-10 70.5 157 31.2
DCAR_025815 Daucus carota HOM05D000896 ORTHO05D000594 3.2e-10 69.7 184 32.6
PGR004G0789 Punica granatum HOM05D000896 ORTHO05D000594 3.2e-10 69.7 133 35.3
Thecc.10G126800 Theobroma cacao HOM05D000896 ORTHO05D000594 3.2e-10 69.7 140 33.6
FAN07G2864 Fragaria x ananassa HOM05D000896 ORTHO05D000594 4.1e-10 69.3 195 28.7
arahy.Tifrunner.gnm1.ann1.4P3ANK Arachis hypogaea HOM05D011529 ORTHO05D000594 5.4e-10 68.9 144 32.6
Dinv21551 Davidia involucrata HOM05D000896 ORTHO05D000594 5.4e-10 68.9 144 31.9
Gohir.D13G231533 Gossypium hirsutum HOM05D000896 ORTHO05D000594 5.4e-10 68.9 192 30.2
Thecc.10G130500 Theobroma cacao HOM05D000896 ORTHO05D000594 5.4e-10 68.9 140 32.1
Ciclev10030095m.g Citrus clementina HOM05D000896 ORTHO05D000594 9.2e-10 68.2 168 31.5
Gohir.D13G055275 Gossypium hirsutum HOM05D000896 ORTHO05D000594 9.2e-10 68.2 139 32.4
Gohir.D13G231566 Gossypium hirsutum HOM05D000896 ORTHO05D000594 9.2e-10 68.2 192 29.7
QL03p039811 Quercus lobata HOM05D000896 ORTHO05D000594 9.2e-10 68.2 139 36.7
Ciclev10030266m.g Citrus clementina HOM05D000896 ORTHO05D000594 1.2e-09 67.8 168 31.0
FAN17G1144 Fragaria x ananassa HOM05D000896 ORTHO05D000594 1.2e-09 67.8 185 30.3
Gohir.A13G066051 Gossypium hirsutum HOM05D015798 ORTHO05D022811 1.2e-09 67.8 139 33.1
Gorai.013G016400 Gossypium raimondii HOM05D015798 ORTHO05D000594 1.2e-09 67.8 139 33.1
Manes.14G006500 Manihot esculenta HOM05D000896 ORTHO05D000594 1.6e-09 67.4 180 29.4
Thecc.10G126400 Theobroma cacao HOM05D000896 ORTHO05D000594 1.6e-09 67.4 140 33.6
Gohir.D02G050732 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.1e-09 67.0 155 32.3
Ciclev10029971m.g Citrus clementina HOM05D000896 ORTHO05D000594 2.7e-09 66.6 150 34.0
Gorai.013G062600 Gossypium raimondii HOM05D000896 ORTHO05D000594 2.7e-09 66.6 114 36.8
Dinv21550 Davidia involucrata HOM05D000896 ORTHO05D000594 3.5e-09 66.2 144 31.2
PGR119G0007 Punica granatum HOM05D000896 ORTHO05D000594 3.5e-09 66.2 133 32.3
Gohir.A01G161180 Gossypium hirsutum HOM05D000896 ORTHO05D000594 4.6e-09 65.9 175 29.7
Sc07g0008350 Simmondsia chinensis HOM05D000896 ORTHO05D000594 4.6e-09 65.9 132 37.9
Gorai.005G056000 Gossypium raimondii HOM05D000896 ORTHO05D000594 6.0e-09 65.5 177 29.9
RcHm_v2.0_Chr1g0380921 Rosa chinensis HOM05D000896 ORTHO05D000594 6.0e-09 65.5 204 28.9
QL03p040295 Quercus lobata HOM05D000896 ORTHO05D000594 7.8e-09 65.1 139 36.0
Atru.chr13.110 Acer truncatum HOM05D000896 ORTHO05D000594 1.0e-08 64.7 136 29.4
Gohir.D02G053350 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.0e-08 64.7 177 29.4
Prupe.6G353200 Prunus persica HOM05D000896 ORTHO05D000594 1.0e-08 64.7 178 28.7
TWI75G1398 Tripterygium wilfordii HOM05D000896 ORTHO05D000594 1.0e-08 64.7 203 29.1
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 1.3e-08 64.3 164 33.5
Gohir.A02G044702 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.3e-08 64.3 175 29.1
Gohir.A07G201750 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.3e-08 64.3 175 29.7
Nitab4.5_0001681g0040 Nicotiana tabacum HOM05D000896 ORTHO05D000594 1.3e-08 64.3 149 32.2
Cpa.g.sc13.154 Carica papaya HOM05D000896 ORTHO05D000594 2.3e-08 63.5 116 36.2
Gohir.D13G014966 Gossypium hirsutum HOM05D015798 ORTHO05D022811 2.3e-08 63.5 139 31.7
Prupe.2G278500 Prunus persica HOM05D000896 ORTHO05D000594 2.3e-08 63.5 166 28.3
TPR.G12242 Trifolium pratense HOM05D000896 ORTHO05D000594 3.0e-08 63.2 148 29.1
Actinidia23083 Actinidia chinensis HOM05D000896 ORTHO05D000594 3.9e-08 62.8 164 28.7
Ciclev10030359m.g Citrus clementina HOM05D000896 ORTHO05D000594 3.9e-08 62.8 183 29.5
FAN14G0662 Fragaria x ananassa HOM05D000896 ORTHO05D000594 3.9e-08 62.8 99 38.4
FAN14G1805 Fragaria x ananassa HOM05D000896 ORTHO05D000594 3.9e-08 62.8 99 38.4
Glyma.01G187100 Glycine max HOM05D000896 ORTHO05D000594 3.9e-08 62.8 171 26.9
Gohir.D02G050666 Gossypium hirsutum HOM05D000896 ORTHO05D000594 3.9e-08 62.8 180 28.9
Dinv08221 Davidia involucrata HOM05D000896 ORTHO05D000594 5.1e-08 62.4 115 34.8
FAN01G0184 Fragaria x ananassa HOM05D000896 ORTHO05D000594 6.6e-08 62.0 155 36.1
Gohir.A01G163850 Gossypium hirsutum HOM05D000896 ORTHO05D000594 6.6e-08 62.0 141 31.2
Cpa.g.sc3.72 Carica papaya HOM05D000896 ORTHO05D000594 8.6e-08 61.6 209 27.3
Cfa016248 Carpinus fangiana HOM05D000896 ORTHO05D000594 8.6e-08 61.6 141 30.5
QL03p040822 Quercus lobata HOM05D000896 ORTHO05D000594 8.6e-08 61.6 132 33.3
Dinv40965 Davidia involucrata HOM05D000896 ORTHO05D000594 1.1e-07 61.2 115 33.9
Duzib138G1815 Durio zibethinus HOM05D000896 ORTHO05D000594 1.1e-07 61.2 200 29.5
FAN06G0415 Fragaria x ananassa HOM05D000896 ORTHO05D000594 1.1e-07 61.2 155 35.5
FAN06G5054 Fragaria x ananassa HOM05D000896 ORTHO05D000594 1.1e-07 61.2 155 35.5
FAN22G1495 Fragaria x ananassa HOM05D000896 ORTHO05D000594 1.1e-07 61.2 126 31.7
Lj4g0007022 Lotus japonicus HOM05D000896 ORTHO05D000594 1.1e-07 61.2 156 29.5
SalBow1G3201 Salvia bowleyana HOM05D000896 ORTHO05D000594 1.1e-07 61.2 163 30.1
Cpa.g.sc4.67 Carica papaya HOM05D000896 ORTHO05D000594 1.5e-07 60.8 212 29.2
ClCG04G005240 Citrullus lanatus HOM05D040391 ORTHO05D034780 1.5e-07 60.8 185 28.6
FvH4_7g31340 Fragaria vesca HOM05D000896 ORTHO05D000594 1.5e-07 60.8 155 35.5
Gohir.D01G148400 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.5e-07 60.8 158 31.0
QL03p040404 Quercus lobata HOM05D000896 ORTHO05D000594 1.5e-07 60.8 132 33.3
Sed0016322 Sechium edule HOM05D000896 ORTHO05D000594 1.5e-07 60.8 173 30.1
Duzib177G0732 Durio zibethinus HOM05D000896 ORTHO05D000594 1.9e-07 60.5 100 37.0
Gohir.A12G043480 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.9e-07 60.5 226 26.5
Gohir.A12G043560 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.9e-07 60.5 226 26.5
Gohir.A12G043720 Gossypium hirsutum HOM05D000896 ORTHO05D000594 1.9e-07 60.5 226 26.5
Phvul.006G044100 Phaseolus vulgaris HOM05D000896 ORTHO05D000594 1.9e-07 60.5 143 27.3
Rhsim02G0212000 Rhododendron simsii HOM05D000896 ORTHO05D000594 1.9e-07 60.5 127 33.1
CANSAT80G0323 Cannabis sativa HOM05D000896 ORTHO05D000594 2.5e-07 60.1 93 38.7
CANSAT80G2420 Cannabis sativa HOM05D000896 ORTHO05D000594 2.5e-07 60.1 93 38.7
CANSAT80G2725 Cannabis sativa HOM05D000896 ORTHO05D000594 2.5e-07 60.1 93 38.7
ClCG04G005250 Citrullus lanatus HOM05D000896 ORTHO05D000594 2.5e-07 60.1 101 39.6
SGA_v2.0_scaffold56G20011 Striga asiatica HOM05D000896 ORTHO05D000594 2.5e-07 60.1 92 37.0
Actinidia23084 Actinidia chinensis HOM05D000896 ORTHO05D000594 3.3e-07 59.7 164 28.0
FAN10G0677 Fragaria x ananassa HOM05D016935 ORTHO05D000594 3.3e-07 59.7 120 36.7
Thecc.03G196400 Theobroma cacao HOM05D000896 ORTHO05D000594 3.3e-07 59.7 83 39.8
Atru.chr1.4152 Acer truncatum HOM05D000896 ORTHO05D000594 4.3e-07 59.3 154 26.0
Cpa.g.sc4.105 Carica papaya HOM05D000896 ORTHO05D000594 4.3e-07 59.3 212 27.8
FAN06G3056 Fragaria x ananassa HOM05D016935 ORTHO05D000594 4.3e-07 59.3 138 34.1
QL03p040416 Quercus lobata HOM05D000896 ORTHO05D000594 4.3e-07 59.3 158 31.0
TPR.G1144 Trifolium pratense HOM05D000896 ORTHO05D000594 4.3e-07 59.3 148 28.4
Haze_00194 Corylus avellana HOM05D000896 ORTHO05D000594 5.6e-07 58.9 104 36.5
FvH4_6g01440 Fragaria vesca HOM05D000896 ORTHO05D000594 5.6e-07 58.9 99 37.4
FAN01G0387 Fragaria x ananassa HOM05D016935 ORTHO05D000594 5.6e-07 58.9 136 33.8
MD07G1290000 Malus domestica HOM05D000896 ORTHO05D000594 7.3e-07 58.5 148 30.4
COL.COLO4_23622 Corchorus olitorius HOM05D000896 ORTHO05D000594 9.6e-07 58.2 193 26.9
Haze_00227 Corylus avellana HOM05D000896 ORTHO05D000594 9.6e-07 58.2 162 30.2
FAN03G1203 Fragaria x ananassa HOM05D016935 ORTHO05D000594 9.6e-07 58.2 151 33.8
Hma1.2p1_0128F.1_g059930 Hydrangea macrophylla HOM05D000896 ORTHO05D000594 9.6e-07 58.2 100 39.0
MD01G1220100 Malus domestica HOM05D000896 ORTHO05D000594 9.6e-07 58.2 189 28.6
Nitab4.5_0000264g0110 Nicotiana tabacum HOM05D000896 ORTHO05D000594 9.6e-07 58.2 174 28.7
QL02p098711 Quercus lobata HOM05D000896 ORTHO05D000594 9.6e-07 58.2 153 32.7
Rhsim07G0194100 Rhododendron simsii HOM05D030800 ORTHO05D030536 9.6e-07 58.2 185 29.2
MELO3C005256.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.2e-06 57.8 149 30.9
Duzib177G1220 Durio zibethinus HOM05D000896 ORTHO05D000594 1.2e-06 57.8 119 37.8
ECA234G4629 Erigeron canadensis HOM05D000896 ORTHO05D000594 1.2e-06 57.8 153 30.1
FAN10G2619 Fragaria x ananassa HOM05D016935 ORTHO05D000594 1.2e-06 57.8 136 33.8
Nitab4.5_0008682g0010 Nicotiana tabacum HOM05D000896 ORTHO05D000594 1.2e-06 57.8 146 34.2
CANSAT80G0091 Cannabis sativa HOM05D000896 ORTHO05D000594 1.6e-06 57.4 93 37.6
COL.COLO4_20383 Corchorus olitorius HOM05D000896 ORTHO05D000594 1.6e-06 57.4 193 26.9
Rhsim07G0194000 Rhododendron simsii HOM05D030800 ORTHO05D030536 1.6e-06 57.4 184 29.9
Gohir.D07G208050 Gossypium hirsutum HOM05D000896 ORTHO05D000594 2.1e-06 57.0 128 31.2
Gorai.008G045700 Gossypium raimondii HOM05D000896 ORTHO05D000594 2.1e-06 57.0 196 27.6
PGSC0003DMG400034363 Solanum tuberosum HOM05D000896 ORTHO05D000594 2.1e-06 57.0 106 36.8
Rhsim02G0212100 Rhododendron simsii HOM05D000896 ORTHO05D000594 2.8e-06 56.6 138 27.5
Glyma.01G187000 Glycine max HOM05D000896 ORTHO05D000594 3.6e-06 56.2 101 31.7
PGSC0003DMG400014860 Solanum tuberosum HOM05D000896 ORTHO05D000594 3.6e-06 56.2 91 39.6
Migut.L00847 Erythranthe guttata HOM05D000896 ORTHO05D000594 4.7e-06 55.8 98 35.7
FvH4_7g31730 Fragaria vesca HOM05D016935 ORTHO05D000594 4.7e-06 55.8 206 28.2
SalBow1G6889 Salvia bowleyana HOM05D000896 ORTHO05D000594 4.7e-06 55.8 182 25.8
TWI34G0441 Tripterygium wilfordii HOM05D000896 ORTHO05D000594 4.7e-06 55.8 145 29.7
Migut.M01845 Erythranthe guttata HOM05D000896 ORTHO05D000594 6.2e-06 55.5 98 35.7
QL10p040408 Quercus lobata HOM05D020057 ORTHO05D000594 6.2e-06 55.5 137 32.1
Gohir.D12G042950 Gossypium hirsutum HOM05D000896 ORTHO05D000594 8.1e-06 55.1 166 30.1
Psat5g258240 Pisum sativum HOM05D000896 ORTHO05D000594 8.1e-06 55.1 143 30.1
Rhsim02G0210600 Rhododendron simsii HOM05D000896 ORTHO05D000594 8.1e-06 55.1 192 27.6

Acer truncatum (2 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (3 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (4 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (4 genes)
Carpinus fangiana (6 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (2 genes)
Citrus clementina (4 genes)
Coffea canephora (0 genes)
Corchorus olitorius (3 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (0 genes)
Daucus carota (2 genes)
Davidia involucrata (4 genes)
Durio zibethinus (6 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (8 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (14 genes)
Glycine max (2 genes)
Gossypium hirsutum (21 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (4 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (3 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (2 genes)
Quercus lobata (7 genes)
Rhododendron simsii (5 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (7 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings