Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 7.4e-306 1053.1 561 100.0
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 2.4e-227 792.3 569 71.7
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 4.0e-227 791.6 567 71.1
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 2.2e-225 785.8 561 73.3
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 6.4e-225 784.3 570 70.5
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 1.1e-224 783.5 572 70.8
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.4e-224 782.3 566 72.1
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.2e-224 781.9 568 73.2
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 4.2e-224 781.6 570 71.1
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 5.4e-224 781.2 566 72.8
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 1.2e-223 780.0 570 74.6
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 1.6e-223 779.6 568 73.2
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.1e-222 774.6 570 70.2
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 8.7e-222 773.9 499 77.2
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 8.7e-222 773.9 569 73.1
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 8.7e-222 773.9 566 70.0
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.5e-221 773.1 567 68.8
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.9e-221 772.7 499 77.0
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 7.3e-221 770.8 569 70.1
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.6e-220 769.6 499 77.2
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 3.6e-220 768.5 569 70.8
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.8e-219 766.1 568 72.0
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.4e-219 765.8 568 72.2
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 2.4e-219 765.8 548 72.1
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 4.0e-219 765.0 564 69.9
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 9.0e-219 763.8 571 69.9
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 1.2e-218 763.5 567 71.8
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 1.5e-218 763.1 545 71.4
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.0e-218 762.7 569 69.9
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 3.4e-218 761.9 569 70.1
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 9.9e-218 760.4 501 74.9
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 2.9e-217 758.8 499 76.8
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 8.4e-217 757.3 558 69.9
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 8.4e-217 757.3 569 69.8
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 3.2e-216 755.4 569 68.9
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 4.2e-216 755.0 567 70.7
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 7.1e-216 754.2 566 69.3
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 9.3e-216 753.8 568 69.0
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 4.6e-215 751.5 500 74.4
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 3.0e-214 748.8 502 73.5
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 5.1e-214 748.0 500 74.4
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 5.1e-214 748.0 569 70.1
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 9.6e-213 743.8 572 70.3
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 6.2e-212 741.1 484 76.9
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 8.1e-212 740.7 568 66.5
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 8.1e-212 740.7 569 67.1
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 1.1e-211 740.3 570 71.1
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 1.8e-211 739.6 568 67.4
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 4.5e-210 734.9 569 67.0
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 9.9e-210 733.8 570 67.7
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 1.3e-209 733.4 501 73.3
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 6.4e-209 731.1 571 67.6
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 8.4e-209 730.7 505 72.9
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.4e-208 729.9 488 74.2
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 1.9e-208 729.6 569 65.6
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 3.2e-208 728.8 575 65.6
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 3.2e-208 728.8 501 73.5
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 1.2e-207 726.9 500 73.0
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 2.1e-207 726.1 568 66.4
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 2.7e-207 725.7 568 66.0
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 2.7e-207 725.7 565 66.0
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 1.0e-206 723.8 556 70.1
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.0e-206 722.2 568 69.7
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 6.7e-206 721.1 570 66.1
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 6.9e-203 711.1 502 71.3
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.5e-202 709.9 501 71.7
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 4.5e-202 708.4 428 80.4
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 7.6e-202 707.6 580 64.5
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 7.6e-202 707.6 568 64.4
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 7.6e-202 707.6 502 71.3
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.0e-201 707.2 501 71.5
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 2.2e-201 706.1 566 65.5
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.9e-200 703.0 501 71.3
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 4.2e-200 701.8 572 68.5
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 5.5e-200 701.4 566 65.7
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 9.3e-200 700.7 502 69.9
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 2.1e-199 699.5 502 71.5
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 4.6e-199 698.4 497 71.4
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 4.6e-199 698.4 571 65.1
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.7e-198 694.5 501 70.7
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.1e-197 693.7 574 64.1
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 1.1e-197 693.7 564 65.1
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.9e-197 693.0 504 69.6
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 2.5e-197 692.6 571 66.9
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 3.3e-197 692.2 502 69.5
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 9.6e-197 690.6 572 65.6
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 9.6e-197 690.6 502 69.5
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 4.8e-196 688.3 570 66.1
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 1.4e-195 686.8 558 64.7
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 1.4e-195 686.8 564 63.5
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 1.8e-195 686.4 500 70.4
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 1.5e-194 683.3 565 65.7
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 2.0e-194 682.9 564 63.3
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 2.5e-192 676.0 575 63.3
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 7.2e-192 674.5 572 61.7
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 2.7e-191 672.5 572 65.6
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 6.1e-191 671.4 560 66.1
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 1.3e-190 670.2 497 69.2
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 3.0e-190 669.1 499 67.1
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.9e-189 666.4 478 70.9
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 1.9e-189 666.4 567 63.7
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 3.3e-189 665.6 584 64.0
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 4.8e-188 661.8 582 63.7
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 8.2e-188 661.0 503 66.6
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 4.1e-187 658.7 498 67.3
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 7.7e-186 654.4 511 65.6
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 6.5e-185 651.4 554 62.1
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 1.8e-182 643.3 500 63.0
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 5.1e-182 641.7 420 75.2
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 5.7e-181 638.3 573 60.6
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 6.1e-175 618.2 506 62.5
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 2.4e-171 606.3 503 61.8
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 4.1e-171 605.5 500 61.8
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 9.1e-171 604.4 506 61.5
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 4.2e-168 595.5 352 80.7
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 9.7e-165 584.3 501 64.5
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 1.7e-164 583.6 500 58.6
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 4.8e-164 582.0 384 72.1
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 6.3e-164 581.6 497 60.2
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 4.1e-163 578.9 445 64.5
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 9.2e-139 498.0 497 51.5
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 1.2e-138 497.7 496 51.2
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 3.0e-137 493.0 482 60.8
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 3.7e-132 476.1 499 49.3
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 2.5e-128 463.4 495 52.3
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 9.8e-125 451.4 511 45.4
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.9e-120 437.2 258 78.7
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 4.1e-115 419.5 492 46.7
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.3e-105 387.1 471 48.2
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 6.6e-105 385.6 449 52.8
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 4.0e-102 376.3 502 47.0
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.7e-92 344.4 303 61.7
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 3.2e-91 340.1 302 55.6
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 3.9e-89 333.2 471 40.6
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 1.1e-78 298.5 381 46.5
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 2.8e-71 273.9 337 41.8
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 1.7e-68 264.6 326 40.2
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 1.4e-67 261.5 273 55.7
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 1.9e-51 208.0 570 31.4
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 1.0e-44 185.7 240 48.3
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 3.6e-34 150.6 535 24.1
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 1.8e-30 138.3 172 50.0
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 3.6e-18 97.4 92 60.9
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 5.0e-12 77.0 66 62.1
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 5.2e-09 67.0 55 67.3
Haze_07633 Corylus avellana HOM05D000453 ORTHO05D000387 3.7e-07 60.8 305 22.6
PRCOL_00005569 Prasinoderma coloniale HOM05D012385 ORTHO05D014380 4.9e-07 60.5 181 29.3
Hund06772 Selenicereus undatus HOM05D002668 ORTHO05D003295 1.1e-06 59.3 198 28.3
Cre04.g217914 Chlamydomonas reinhardtii HOM05D012385 ORTHO05D014380 5.4e-06 57.0 188 27.7

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (2 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (5 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (2 genes)
Magnolia biondii (3 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (2 genes)
Prunus persica (2 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings