Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.6e-109 398.7 192 100.0
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 2.7e-74 282.3 148 89.9
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 4.3e-72 275.0 148 88.5
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 2.9e-60 235.7 148 75.0
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 1.0e-57 227.3 148 70.3
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.0e-53 213.0 132 74.2
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.6e-34 150.2 146 54.1
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 2.7e-34 149.4 136 52.2
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 2.7e-34 149.4 148 52.0
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 8.0e-34 147.9 140 52.1
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 4.0e-33 145.6 151 49.0
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 1.5e-32 143.7 145 49.7
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 3.3e-32 142.5 144 48.6
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 4.4e-32 142.1 143 51.0
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 1.7e-31 140.2 124 54.8
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 2.2e-31 139.8 149 49.0
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 2.2e-31 139.8 135 51.1
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 2.8e-31 139.4 140 50.7
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 4.8e-31 138.7 141 51.1
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 6.3e-31 138.3 147 47.6
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 8.2e-31 137.9 147 47.6
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 8.2e-31 137.9 147 46.9
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 8.2e-31 137.9 137 48.9
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.8e-30 136.7 152 47.4
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.4e-30 136.3 147 47.6
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 4.1e-30 135.6 136 51.5
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.7e-29 132.9 136 50.7
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 3.5e-29 132.5 151 46.4
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 1.7e-28 130.2 143 48.3
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 2.2e-28 129.8 137 49.6
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 6.5e-28 128.3 161 44.7
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 6.5e-28 128.3 151 45.7
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.1e-27 127.5 129 48.8
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.1e-27 127.5 140 49.3
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 1.5e-27 127.1 132 50.0
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 2.5e-27 126.3 150 44.7
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 2.5e-27 126.3 150 44.7
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 2.5e-27 126.3 130 47.7
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 3.2e-27 125.9 140 48.6
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 9.4e-27 124.4 137 48.9
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 9.4e-27 124.4 124 51.6
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.1e-26 123.2 139 44.6
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 4.7e-26 122.1 125 45.6
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 6.1e-26 121.7 155 45.8
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 6.1e-26 121.7 155 45.8
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 1.0e-25 120.9 126 42.1
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 1.4e-25 120.6 145 45.5
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.4e-25 120.6 155 45.2
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 1.4e-25 120.6 155 45.2
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.4e-25 120.6 133 48.9
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 2.3e-25 119.8 133 48.9
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 3.0e-25 119.4 130 48.5
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 4.0e-25 119.0 133 50.4
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 4.0e-25 119.0 124 46.8
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 5.2e-25 118.6 148 44.6
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 2.6e-24 116.3 132 45.5
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 3.4e-24 115.9 122 46.7
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 4.4e-24 115.5 165 41.2
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 9.8e-24 114.4 143 45.5
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 1.3e-23 114.0 140 42.1
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.8e-23 112.1 127 44.9
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 6.3e-23 111.7 127 47.2
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 8.3e-23 111.3 103 53.4
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 1.1e-22 110.9 164 38.4
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 1.4e-22 110.5 134 41.0
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 1.8e-22 110.2 149 44.3
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.8e-22 110.2 127 47.2
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 1.8e-22 110.2 124 46.0
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 4.1e-22 109.0 121 45.5
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 5.4e-22 108.6 130 43.1
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 7.0e-22 108.2 131 44.3
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 9.1e-22 107.8 124 46.0
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.2e-21 107.5 131 44.3
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 1.2e-21 107.5 163 38.0
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 2.0e-21 106.7 132 42.4
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 2.7e-21 106.3 146 42.5
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 5.9e-21 105.1 147 40.8
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 7.7e-21 104.8 138 42.0
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 7.7e-21 104.8 146 39.0
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 1.0e-20 104.4 102 50.0
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 1.7e-20 103.6 137 41.6
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 2.3e-20 103.2 130 41.5
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 2.3e-20 103.2 145 37.9
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 2.9e-20 102.8 157 38.2
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 5.0e-20 102.1 120 46.7
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 5.0e-20 102.1 119 44.5
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 6.6e-20 101.7 129 45.0
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 6.6e-20 101.7 157 37.6
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 6.6e-20 101.7 134 41.0
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 8.6e-20 101.3 134 40.3
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 8.6e-20 101.3 132 42.4
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 1.5e-19 100.5 144 39.6
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 2.5e-19 99.8 129 41.9
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 4.2e-19 99.0 126 41.3
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 9.5e-19 97.8 160 38.8
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 2.1e-18 96.7 117 44.4
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 8.0e-18 94.7 124 43.5
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 8.0e-18 94.7 156 34.6
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 8.0e-18 94.7 163 37.4
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 1.0e-17 94.4 103 44.7
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 2.3e-17 93.2 109 45.9
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 3.0e-17 92.8 127 41.7
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 1.2e-16 90.9 138 37.0
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 2.0e-16 90.1 115 41.7
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 2.6e-16 89.7 120 38.3
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 2.6e-16 89.7 129 41.1
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 3.4e-16 89.4 114 38.6
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 3.4e-16 89.4 138 41.3
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 4.4e-16 89.0 133 39.1
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 4.4e-16 89.0 125 44.8
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 4.4e-16 89.0 125 44.8
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 5.7e-16 88.6 103 42.7
SGA_v2.0_scaffold98G29378 Striga asiatica HOM05D000462 ORTHO05D005846 7.5e-16 88.2 179 33.0
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.3e-15 87.4 138 40.6
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 2.2e-15 86.7 101 48.5
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 3.7e-15 85.9 93 49.5
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 4.9e-15 85.5 111 37.8
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.1e-14 84.3 150 37.3
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-14 84.0 99 43.4
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 1.8e-14 83.6 76 52.6
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 7.0e-14 81.6 149 35.6
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 9.2e-14 81.3 122 37.7
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 9.2e-14 81.3 125 38.4
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.2e-13 80.9 70 50.0
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 1.0e-12 77.8 112 42.0
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 1.0e-12 77.8 112 42.0
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.3e-12 77.4 130 36.9
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.3e-12 77.4 149 34.2
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.3e-12 77.4 94 41.5
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.1e-11 74.3 102 37.3
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 9.5e-11 71.2 120 34.2
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 1.6e-10 70.5 95 42.1
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 1.6e-10 70.5 89 40.4
TPR.G34039 Trifolium pratense HOM05D000462 ORTHO05D005846 6.1e-10 68.6 90 38.9
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 1.8e-09 67.0 108 35.2
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 2.3e-09 66.6 95 37.9
Aqoxy3G01422 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 3.4e-08 62.8 98 36.7
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 3.4e-08 62.8 129 31.0
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 9.8e-08 61.2 65 44.6
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 1.7e-07 60.5 104 35.6
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 1.7e-07 60.5 99 34.3
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 3.7e-07 59.3 45 57.8
Aqoxy5G02746 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 1.1e-06 57.8 101 33.7
FvH4_7g07710 Fragaria vesca HOM05D000462 ORTHO05D005846 1.1e-06 57.8 125 33.6
Nitab4.5_0006031g0060 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.4e-06 57.4 103 34.0
Sed0013260 Sechium edule HOM05D000395 ORTHO05D000088 3.2e-06 56.2 96 34.4
SGA_v2.0_scaffold55G19766 Striga asiatica HOM05D000823 ORTHO05D000088 3.2e-06 56.2 85 38.8
VMungo1127G1459 Vigna mungo HOM05D000823 ORTHO05D000088 3.2e-06 56.2 134 34.3
COL.COLO4_11317 Corchorus olitorius HOM05D000395 ORTHO05D000088 5.4e-06 55.5 63 41.3
Gohir.D12G067900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.4e-06 55.5 108 30.6
Gorai.008G071300 Gossypium raimondii HOM05D000395 ORTHO05D000088 5.4e-06 55.5 108 30.6
Nitab4.5_0000216g0220 Nicotiana tabacum HOM05D010896 ORTHO05D011162 5.4e-06 55.5 77 36.4
PSO017G5313 Papaver somniferum HOM05D000823 ORTHO05D000088 5.4e-06 55.5 92 32.6
CSS0021571 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 7.0e-06 55.1 126 33.3
COL.COLO4_11361 Corchorus olitorius HOM05D000395 ORTHO05D000088 7.0e-06 55.1 100 31.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (7 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (2 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (0 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (7 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (4 genes)
Corchorus olitorius (2 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (4 genes)
Fragaria x ananassa (7 genes)
Glycine max (1 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (6 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (5 genes)
Petunia axillaris (6 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (3 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (6 genes)
Salix brachista (0 genes)
Salvia bowleyana (6 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (3 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (3 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings