Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Cfa014735	Carpinus fangiana	HOM05D000060	ORTHO05D000082	2.2e-23	111.3	51	100.0
CiPaw.04G130200	Carya illinoinensis	HOM05D000060	ORTHO05D000082	4.3e-11	70.5	34	82.4
Actinidia30448	Actinidia chinensis	HOM05D000060	ORTHO05D000082	1.3e-10	68.9	41	65.9
RcHm_v2.0_Chr2g0128781	Rosa chinensis	HOM05D000060	ORTHO05D000082	1.6e-10	68.6	34	82.4
CANSAT21G1435	Cannabis sativa	HOM05D000060	ORTHO05D000082	2.1e-10	68.2	35	80.0
CANSAT21G1438	Cannabis sativa	HOM05D000060	ORTHO05D000082	2.1e-10	68.2	35	80.0
CiPaw.03G183600	Carya illinoinensis	HOM05D000060	ORTHO05D000082	2.1e-10	68.2	35	82.9
EL10Ac8g18320	Beta vulgaris	HOM05D000060	ORTHO05D000082	4.8e-10	67.0	40	65.0
Prupe.3G126300	Prunus persica	HOM05D000060	ORTHO05D000082	6.2e-10	66.6	34	82.4
FvH4_6g26950	Fragaria vesca	HOM05D000060	ORTHO05D000082	8.1e-10	66.2	34	79.4
FAN02G2286	Fragaria x ananassa	HOM05D000060	ORTHO05D000082	8.1e-10	66.2	34	79.4
Rhsim04G0072500	Rhododendron simsii	HOM05D000211	ORTHO05D002682	8.1e-10	66.2	35	74.3
Ah.01g002920	Amaranthus hybridus	HOM05D000060	ORTHO05D000082	1.1e-09	65.9	40	70.0
CSS0006385	Camellia sinensis var. sinensis	HOM05D000060	ORTHO05D000082	1.4e-09	65.5	35	71.4
AUR62024074	Chenopodium quinoa	HOM05D000060	ORTHO05D000082	1.4e-09	65.5	35	74.3
AUR62035382	Chenopodium quinoa	HOM05D000060	ORTHO05D000082	1.4e-09	65.5	35	74.3
QL08p040955	Quercus lobata	HOM05D000060	ORTHO05D000082	1.4e-09	65.5	35	74.3
Oeu064836.1	Olea europaea	HOM05D000060	ORTHO05D000082	1.8e-09	65.1	35	74.3
Thecc.01G240500	Theobroma cacao	HOM05D000060	ORTHO05D000082	1.8e-09	65.1	33	72.7
Peaxi162Scf00384g00066	Petunia axillaris	HOM05D000060	ORTHO05D000082	2.4e-09	64.7	49	46.9
Sc12g0003310	Simmondsia chinensis	HOM05D000060	ORTHO05D000082	3.1e-09	64.3	35	74.3
CAN.G318.6	Capsicum annuum	HOM05D000060	ORTHO05D000082	4.0e-09	63.9	41	58.5
Solyc12g010810.1	Solanum lycopersicum	HOM05D000060	ORTHO05D000082	4.0e-09	63.9	41	53.7
Nitab4.5_0000537g0030	Nicotiana tabacum	HOM05D000060	ORTHO05D000082	5.3e-09	63.5	41	53.7
Atru.chr6.2841	Acer truncatum	HOM05D000211	ORTHO05D002682	9.0e-09	62.8	33	69.7
DCAR_013052	Daucus carota	HOM05D000060	ORTHO05D000082	1.5e-08	62.0	49	53.1
FAN05G3686	Fragaria x ananassa	HOM05D005675	ORTHO05D006884	2.0e-08	61.6	33	75.8
SGA_v2.0_scaffold109G31119	Striga asiatica	HOM05D000104	ORTHO05D008076	2.0e-08	61.6	36	66.7
Migut.H02160	Erythranthe guttata	HOM05D000060	ORTHO05D000082	2.6e-08	61.2	36	66.7
Gohir.A11G060100	Gossypium hirsutum	HOM05D000060	ORTHO05D000082	2.6e-08	61.2	33	66.7
Gohir.D11G064200	Gossypium hirsutum	HOM05D000060	ORTHO05D000082	2.6e-08	61.2	33	66.7
Gorai.007G069400	Gossypium raimondii	HOM05D000060	ORTHO05D000082	2.6e-08	61.2	33	66.7
Nitab4.5_0006973g0080	Nicotiana tabacum	HOM05D000060	ORTHO05D000082	4.4e-08	60.5	41	58.5
Lj8C105T13	Lonicera japonica	HOM05D000060	ORTHO05D000082	5.8e-08	60.1	35	71.4
ClCG02G010110	Citrullus lanatus	HOM05D000060	ORTHO05D000082	7.6e-08	59.7	33	72.7
SalBow7G1043	Salvia bowleyana	HOM05D000060	ORTHO05D000082	1.3e-07	58.9	36	66.7
SalBow7G2299	Salvia bowleyana	HOM05D000060	ORTHO05D000082	1.3e-07	58.9	36	66.7
MELO3C019314.2	Cucumis melo	HOM05D000060	ORTHO05D000082	2.2e-07	58.2	33	66.7
CsaV3_2G034590	Cucumis sativus L.	HOM05D000060	ORTHO05D000082	2.2e-07	58.2	33	66.7
DCAR_009764	Daucus carota	HOM05D000060	ORTHO05D000082	2.2e-07	58.2	35	62.9
DCAR_021275	Daucus carota	HOM05D000060	ORTHO05D000082	2.9e-07	57.8	35	65.7
Dinv02420	Davidia involucrata	HOM05D000060	ORTHO05D000082	2.9e-07	57.8	36	66.7
Manes.12G091800	Manihot esculenta	HOM05D000060	ORTHO05D000082	2.9e-07	57.8	33	66.7
Lsat_1_v5_gn_4_28400	Lactuca sativa	HOM05D000060	ORTHO05D000082	3.8e-07	57.4	35	62.9
HanXRQChr17g0565281	Helianthus annuus	HOM05D000060	ORTHO05D000082	4.9e-07	57.0	35	65.7
MD07G1305100	Malus domestica	HOM05D000060	ORTHO05D000082	4.9e-07	57.0	31	77.4
Ciclev10017646m.g	Citrus clementina	HOM05D000060	ORTHO05D000082	6.4e-07	56.6	34	64.7
Duzib264G0988	Durio zibethinus	HOM05D000060	ORTHO05D000082	8.4e-07	56.2	33	60.6
Lj3g0014591	Lotus japonicus	HOM05D000060	ORTHO05D000082	8.4e-07	56.2	29	69.0
Aqoxy1G02232	Aquilegia oxysepala	HOM05D000060	ORTHO05D000082	1.1e-06	55.8	48	47.9
HanXRQChr16g0526371	Helianthus annuus	HOM05D000060	ORTHO05D000082	1.1e-06	55.8	35	62.9
Potri.013G123900	Populus trichocarpa	HOM05D000060	ORTHO05D000082	1.9e-06	55.1	33	63.6
Lalb_Chr19g0135011	Lupinus albus	HOM05D000060	ORTHO05D000082	4.2e-06	53.9	43	55.8
VMungo1127G1659	Vigna mungo	HOM05D000060	ORTHO05D000082	4.2e-06	53.9	29	72.4
AL1G16290	Arabidopsis lyrata	HOM05D000060	ORTHO05D000082	5.4e-06	53.5	33	63.6
AT1G06280	Arabidopsis thaliana	HOM05D000060	ORTHO05D000082	5.4e-06	53.5	33	63.6
Carub.0001s0565	Capsella rubella	HOM05D000060	ORTHO05D000082	5.4e-06	53.5	33	63.6
CARHR005860	Cardamine hirsuta	HOM05D000060	ORTHO05D000082	5.4e-06	53.5	33	63.6
Sp1g05090	Schrenkiella parvula	HOM05D000060	ORTHO05D000082	5.4e-06	53.5	33	63.6
Aa31LG1G7300	Aethionema arabicum	HOM05D000060	ORTHO05D000082	7.1e-06	53.1	33	60.6
Lalb_Chr03g0029761	Lupinus albus	HOM05D000060	ORTHO05D000082	7.1e-06	53.1	43	51.2
THA.LOC104800853	Tarenaya hassleriana	HOM05D000060	ORTHO05D000082	7.1e-06	53.1	33	63.6
C08p51310	Brassica napus	HOM05D001058	ORTHO05D000911	9.3e-06	52.8	33	63.6
BolC8t52657H	Brassica oleracea	HOM05D001058	ORTHO05D000911	9.3e-06	52.8	33	63.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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