Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.8e-65 250.4 132 100.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-25 120.2 134 60.4
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 8.2e-22 107.5 142 50.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.4e-21 106.7 130 49.2
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 7.7e-20 100.9 139 52.5
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.2e-19 99.4 140 49.3
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 6.5e-19 97.8 137 49.6
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 4.2e-18 95.1 135 52.6
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 4.2e-18 95.1 135 52.6
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 4.2e-18 95.1 135 52.6
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.2e-18 95.1 148 46.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-17 93.6 147 42.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.6e-17 93.2 131 48.1
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 8.0e-17 90.9 156 41.0
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.8e-16 89.7 143 46.9
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.0e-16 89.0 108 50.0
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 3.9e-16 88.6 153 44.4
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.2e-16 88.2 147 42.9
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.2e-16 88.2 148 42.6
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-15 87.0 108 49.1
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.5e-15 86.7 131 46.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.0e-15 86.3 101 54.5
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.3e-15 85.5 121 46.3
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.4e-15 84.3 124 44.4
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 1.3e-14 83.6 140 40.0
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 1.3e-14 83.6 70 65.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 2.2e-14 82.8 144 45.8
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 3.7e-14 82.0 140 43.6
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.3e-14 81.3 141 43.3
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 8.2e-14 80.9 76 59.2
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.8e-13 79.7 137 40.1
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.8e-13 79.7 120 45.8
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 4.1e-13 78.6 154 38.3
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 5.3e-13 78.2 139 45.3
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 9.1e-13 77.4 81 54.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-12 77.0 156 42.3
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.6e-12 76.6 161 39.8
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-12 76.6 115 41.7
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 3.5e-12 75.5 70 48.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.5e-12 75.5 98 50.0
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 3.5e-12 75.5 150 41.3
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.5e-12 75.1 137 40.9
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 7.7e-12 74.3 96 51.0
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.0e-11 73.9 126 39.7
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.3e-11 73.6 163 38.7
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 1.7e-11 73.2 154 37.7
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 2.2e-11 72.8 138 42.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 3.8e-11 72.0 110 49.1
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.8e-11 72.0 97 47.4
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.0e-11 71.6 78 52.6
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 6.5e-11 71.2 131 44.3
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.1e-10 70.5 82 56.1
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.9e-10 69.7 120 44.2
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.2e-10 68.9 93 46.2
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 4.2e-10 68.6 154 36.4
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 4.2e-10 68.6 157 36.3
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 4.2e-10 68.6 131 34.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 5.5e-10 68.2 74 55.4
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 7.2e-10 67.8 102 44.1
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 7.2e-10 67.8 132 40.2
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 9.4e-10 67.4 102 44.1
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 9.4e-10 67.4 98 46.9
Thhalv10015059m.g Eutrema salsugineum HOM05D010528 ORTHO05D005174 1.2e-09 67.0 81 53.1
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-09 67.0 127 37.8
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.2e-09 67.0 127 37.8
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.6e-09 66.6 72 55.6
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 2.7e-09 65.9 81 50.6
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-09 65.9 97 45.4
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.1e-09 64.7 136 43.4
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.1e-09 64.7 136 43.4
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 6.1e-09 64.7 110 40.0
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 8.0e-09 64.3 120 37.5
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 8.0e-09 64.3 98 45.9
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 8.0e-09 64.3 128 40.6
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.0e-08 63.9 130 38.5
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.0e-08 63.9 136 40.4
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 1.0e-08 63.9 134 35.1
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 1.4e-08 63.5 76 50.0
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.4e-08 63.5 136 40.4
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.4e-08 63.5 108 38.0
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.8e-08 63.2 120 42.5
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.8e-08 63.2 95 41.1
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-08 62.8 79 48.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.3e-08 62.8 113 40.7
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 5.2e-08 61.6 87 41.4
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 6.7e-08 61.2 131 38.2
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.7e-08 61.2 136 41.9
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.8e-08 60.8 76 46.1
A03p00680 Brassica napus HOM05D010528 ORTHO05D005174 1.5e-07 60.1 107 39.3
A03p00720 Brassica napus HOM05D010528 ORTHO05D005174 1.5e-07 60.1 107 39.3
C03p00950 Brassica napus HOM05D010528 ORTHO05D005174 1.5e-07 60.1 107 39.3
BolC3t12657H Brassica oleracea HOM05D010528 ORTHO05D005174 1.5e-07 60.1 107 39.3
BraA03t09457Z Brassica rapa HOM05D010528 ORTHO05D005174 1.5e-07 60.1 107 39.3
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 2.0e-07 59.7 102 45.1
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 2.0e-07 59.7 110 40.9
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.0e-07 59.7 127 40.2
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 2.6e-07 59.3 102 39.2
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 3.3e-07 58.9 82 45.1
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 3.3e-07 58.9 133 35.3
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 3.3e-07 58.9 109 40.4
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 5.7e-07 58.2 94 46.8
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 5.7e-07 58.2 124 37.1
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 9.7e-07 57.4 128 35.2
CAN.G530.11 Capsicum annuum HOM05D016316 ORTHO05D018871 1.3e-06 57.0 75 45.3
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 1.7e-06 56.6 128 39.8
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.7e-06 56.6 91 44.0
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 1.7e-06 56.6 111 38.7
TPR.G14476 Trifolium pratense HOM05D005967 ORTHO05D005174 2.2e-06 56.2 113 40.7
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 2.8e-06 55.8 94 42.6
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 3.7e-06 55.5 104 35.6
Psat0s8791g0040 Pisum sativum HOM05D005967 ORTHO05D005174 3.7e-06 55.5 115 42.6
THA.LOC104823258 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 3.7e-06 55.5 71 40.8
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 3.7e-06 55.5 61 45.9
C09p74150 Brassica napus HOM05D010528 ORTHO05D005174 4.8e-06 55.1 72 45.8
BolC9t60147H Brassica oleracea HOM05D010528 ORTHO05D005174 4.8e-06 55.1 72 45.8
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 8.2e-06 54.3 57 49.1

Acer truncatum (2 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (3 genes)
Davidia involucrata (5 genes)
Durio zibethinus (5 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (8 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (2 genes)
Lupinus albus (0 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (0 genes)
Olea europaea (8 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (0 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings