Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049288 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 1.0e-37 159.5 74 100.0
CSS0047129 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 3.0e-37 157.9 74 98.6
SalBow5G0820 Salvia bowleyana HOM05D004530 ORTHO05D005839 4.9e-16 87.4 44 90.9
vmacro13497 Vaccinium macrocarpon HOM05D004530 ORTHO05D005839 8.4e-16 86.7 40 95.0
Actinidia12143 Actinidia chinensis HOM05D004530 ORTHO05D005839 4.2e-15 84.3 40 92.5
Nitab4.5_0000920g0020 Nicotiana tabacum HOM05D004530 ORTHO05D005839 4.2e-15 84.3 40 90.0
Nitab4.5_0007027g0030 Nicotiana tabacum HOM05D004530 ORTHO05D005839 4.2e-15 84.3 40 90.0
MSTRG.20690 Avicennia marina HOM05D004530 ORTHO05D005839 9.3e-15 83.2 40 92.5
Cc02_g25120 Coffea canephora HOM05D004530 ORTHO05D005839 9.3e-15 83.2 40 90.0
Hma1.2p1_0041F.1_g025350 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 1.2e-14 82.8 40 90.0
SGA_v2.0_scaffold52G19226 Striga asiatica HOM05D004530 ORTHO05D005839 1.6e-14 82.4 53 71.7
Hund17085 Selenicereus undatus HOM05D004530 ORTHO05D005839 2.7e-14 81.6 41 82.9
unitig_26.g9593 Utricularia gibba HOM05D004530 ORTHO05D005839 2.7e-14 81.6 42 88.1
CAN.G1473.6 Capsicum annuum HOM05D004530 ORTHO05D005839 4.6e-14 80.9 40 87.5
ECA240G1126 Erigeron canadensis HOM05D004530 ORTHO05D005839 6.0e-14 80.5 40 87.5
Lsat_1_v5_gn_3_126420 Lactuca sativa HOM05D004530 ORTHO05D005839 6.0e-14 80.5 40 87.5
HanXRQChr03g0093061 Helianthus annuus HOM05D004530 ORTHO05D005839 7.9e-14 80.1 40 85.0
Ah.05g173100 Amaranthus hybridus HOM05D004530 ORTHO05D005839 1.0e-13 79.7 40 85.0
EL10Ac1g00762 Beta vulgaris HOM05D004530 ORTHO05D005839 1.0e-13 79.7 40 85.0
Haze_02848 Corylus avellana HOM05D004530 ORTHO05D005839 1.0e-13 79.7 74 54.1
MBI04_g41763_MAGBIO Magnolia biondii HOM05D004530 ORTHO05D005839 1.0e-13 79.7 43 79.1
Rhsim07G0036000 Rhododendron simsii HOM05D004530 ORTHO05D005839 1.0e-13 79.7 40 87.5
Solyc01g090230.3 Solanum lycopersicum HOM05D004530 ORTHO05D005839 1.3e-13 79.3 40 87.5
Sopen01g036030 Solanum pennellii HOM05D004530 ORTHO05D005839 1.3e-13 79.3 40 87.5
Dinv44062 Davidia involucrata HOM05D004530 ORTHO05D005839 2.3e-13 78.6 40 87.5
Ah.05g174030 Amaranthus hybridus HOM05D004530 ORTHO05D005839 3.0e-13 78.2 42 81.0
MELO3C005943.2 Cucumis melo HOM05D004530 ORTHO05D005839 3.0e-13 78.2 52 67.3
CsaV3_3G007220 Cucumis sativus L. HOM05D004530 ORTHO05D005839 3.0e-13 78.2 52 67.3
Sc26g0001580 Simmondsia chinensis HOM05D004530 ORTHO05D005839 3.0e-13 78.2 52 69.2
Nn6g33827 Nelumbo nucifera HOM05D004530 ORTHO05D005839 3.9e-13 77.8 40 82.5
AUR62013743 Chenopodium quinoa HOM05D004530 ORTHO05D005839 6.7e-13 77.0 40 82.5
AUR62023408 Chenopodium quinoa HOM05D004530 ORTHO05D005839 6.7e-13 77.0 40 82.5
AUR62043872 Chenopodium quinoa HOM05D004530 ORTHO05D005839 6.7e-13 77.0 40 82.5
Eucgr.E01549 Eucalyptus grandis HOM05D004530 ORTHO05D005839 8.7e-13 76.6 67 56.7
MD07G1109200 Malus domestica HOM05D004530 ORTHO05D005839 8.7e-13 76.6 40 80.0
Potri.014G047600 Populus trichocarpa HOM05D004530 ORTHO05D005839 8.7e-13 76.6 40 82.5
TAR629G3313 Trochodendron aralioides HOM05D004530 ORTHO05D005839 8.7e-13 76.6 40 82.5
HPP92_022509 Vanilla planifolia HOM05D004530 ORTHO05D005839 8.7e-13 76.6 40 80.0
BcaB03g13633 Brassica carinata HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
A10p00110 Brassica napus HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
C05p00080 Brassica napus HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
BolC5t28795H Brassica oleracea HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
BraA10t42289Z Brassica rapa HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
Carub.0001s0010 Capsella rubella HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
CARHR000210 Cardamine hirsuta HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
Thhalv10007106m.g Eutrema salsugineum HOM05D004530 ORTHO05D005839 1.1e-12 76.3 63 55.6
PGR042G2176 Punica granatum HOM05D004530 ORTHO05D005839 1.1e-12 76.3 72 54.2
TWI59G1339 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 1.1e-12 76.3 52 65.4
Zm00001eb105340 Zea mays HOM05D004530 ORTHO05D005839 1.1e-12 76.3 40 80.0
Atru.chr5.126 Acer truncatum HOM05D004530 ORTHO05D005839 1.5e-12 75.9 40 77.5
Aa31LG1G11490 Aethionema arabicum HOM05D004530 ORTHO05D005839 1.5e-12 75.9 63 54.0
ATR0057G115 Amborella trichopoda HOM05D004530 ORTHO05D005839 1.5e-12 75.9 40 77.5
CiPaw.13G026100 Carya illinoinensis HOM05D004530 ORTHO05D005839 1.5e-12 75.9 40 77.5
QL04p030285 Quercus lobata HOM05D004530 ORTHO05D005839 1.5e-12 75.9 40 77.5
Sabra14G0034600 Salix brachista HOM05D004530 ORTHO05D005839 1.5e-12 75.9 40 80.0
Lalb_Chr12g0210571 Lupinus albus HOM05D004530 ORTHO05D005839 1.9e-12 75.5 52 65.4
Medtr8g006895 Medicago truncatula HOM05D004530 ORTHO05D005839 1.9e-12 75.5 40 80.0
TPR.G33134 Trifolium pratense HOM05D004530 ORTHO05D005839 1.9e-12 75.5 40 80.0
AL1G10110 Arabidopsis lyrata HOM05D004530 ORTHO05D005839 2.5e-12 75.1 63 52.4
AT1G02120 Arabidopsis thaliana HOM05D004530 ORTHO05D005839 2.5e-12 75.1 63 52.4
CDE11G0737 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 2.5e-12 75.1 40 77.5
MD02G1212800 Malus domestica HOM05D004530 ORTHO05D005839 2.5e-12 75.1 40 77.5
Manes.01G274600 Manihot esculenta HOM05D004530 ORTHO05D005839 2.5e-12 75.1 40 77.5
Zm00001eb321770 Zea mays HOM05D004530 ORTHO05D005839 2.5e-12 75.1 40 77.5
Ciclev10019258m.g Citrus clementina HOM05D004530 ORTHO05D005839 3.3e-12 74.7 40 77.5
Lalb_Chr07g0195421 Lupinus albus HOM05D004530 ORTHO05D005839 3.3e-12 74.7 52 63.5
GSVIVG01018280001 Vitis vinifera HOM05D004530 ORTHO05D005839 3.3e-12 74.7 52 65.4
Glyma.20G070800 Glycine max HOM05D004530 ORTHO05D005839 4.3e-12 74.3 52 63.5
Gohir.A08G138600 Gossypium hirsutum HOM05D004530 ORTHO05D005839 4.3e-12 74.3 40 77.5
Gohir.D08G159900 Gossypium hirsutum HOM05D004530 ORTHO05D005839 4.3e-12 74.3 40 77.5
Gorai.004G166100 Gossypium raimondii HOM05D004530 ORTHO05D005839 4.3e-12 74.3 40 77.5
Psat4g224840 Pisum sativum HOM05D004530 ORTHO05D005839 4.3e-12 74.3 42 73.8
RcHm_v2.0_Chr1g0347921 Rosa chinensis HOM05D004530 ORTHO05D005839 4.3e-12 74.3 64 56.2
TAR375G0493 Trochodendron aralioides HOM05D004530 ORTHO05D005839 4.3e-12 74.3 40 77.5
arahy.Tifrunner.gnm1.ann1.BH8PB4 Arachis hypogaea HOM05D004530 ORTHO05D005839 5.6e-12 73.9 40 77.5
arahy.Tifrunner.gnm1.ann1.WR8IC8 Arachis hypogaea HOM05D004530 ORTHO05D005839 5.6e-12 73.9 40 77.5
Ca_25804_v3 Cicer arietinum L. HOM05D004530 ORTHO05D005839 5.6e-12 73.9 40 77.5
COL.COLO4_12407 Corchorus olitorius HOM05D004530 ORTHO05D005839 5.6e-12 73.9 40 77.5
Duzib133G0606 Durio zibethinus HOM05D004530 ORTHO05D005839 5.6e-12 73.9 52 63.5
Prupe.2G131900 Prunus persica HOM05D004530 ORTHO05D005839 7.4e-12 73.6 40 75.0
Gorai.004G070300 Gossypium raimondii HOM05D004530 ORTHO05D005839 9.6e-12 73.2 56 58.9
Lj3g0003084 Lotus japonicus HOM05D004530 ORTHO05D005839 9.6e-12 73.2 40 75.0
Sed0010787 Sechium edule HOM05D004530 ORTHO05D005839 9.6e-12 73.2 40 75.0
CDE06G1928 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 1.3e-11 72.8 40 75.0
Duzib138G0269 Durio zibethinus HOM05D004530 ORTHO05D005839 1.3e-11 72.8 40 75.0
Glyma.10G120400 Glycine max HOM05D004530 ORTHO05D005839 1.3e-11 72.8 40 75.0
THA.LOC104817000 Tarenaya hassleriana HOM05D004530 ORTHO05D005839 1.3e-11 72.8 40 77.5
FvH4_7g10200 Fragaria vesca HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
FAN01G0552 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
FAN06G2217 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
FAN06G5079 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
FAN10G1666 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
FAN10G4098 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
PSO675G1201 Papaver somniferum HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 75.0
PSO732G0778 Papaver somniferum HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 75.0
PSO832G0798 Papaver somniferum HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 75.0
Phvul.010G049900 Phaseolus vulgaris HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
VMungo0331G0336 Vigna mungo HOM05D004530 ORTHO05D005839 2.1e-11 72.0 40 72.5
TWI14G0541 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 2.8e-11 71.6 40 75.0
Gohir.D12G099900 Gossypium hirsutum HOM05D004530 ORTHO05D005839 3.7e-11 71.2 40 70.0
Gorai.008G108800 Gossypium raimondii HOM05D004530 ORTHO05D005839 3.7e-11 71.2 40 70.0
CDE06G0463 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 6.2e-11 70.5 40 70.0
FAN03G1354 Fragaria x ananassa HOM05D004530 ORTHO05D005839 6.2e-11 70.5 40 70.0
Gohir.D08G067550 Gossypium hirsutum HOM05D004530 ORTHO05D005839 6.2e-11 70.5 40 72.5
Aqoxy7G00763 Aquilegia oxysepala HOM05D004530 ORTHO05D005839 8.1e-11 70.1 40 75.0
Thecc.01G394900 Theobroma cacao HOM05D004530 ORTHO05D005839 8.1e-11 70.1 40 72.5
Potri.002G137800 Populus trichocarpa HOM05D004530 ORTHO05D005839 1.1e-10 69.7 52 61.5
SMO228G0106 Selaginella moellendorffii HOM05D004530 ORTHO05D005839 1.8e-10 68.9 56 55.4
Mapoly0083s0023 Marchantia polymorpha HOM05D004530 ORTHO05D005839 2.4e-10 68.6 40 70.0
SEGI_01894 Sequoiadendron giganteum HOM05D004530 ORTHO05D005839 2.4e-10 68.6 41 65.9
AagrBONN_evm.TU.Sc2ySwM_117.1176 Anthoceros agrestis HOM05D004530 ORTHO05D005839 3.1e-10 68.2 40 67.5
Gohir.A08G058400 Gossypium hirsutum HOM05D004530 ORTHO05D005839 3.1e-10 68.2 40 70.0
Pp3c9_25660 Physcomitrium patens HOM05D004530 ORTHO05D005839 5.3e-10 67.4 57 52.6
CDE07G0055 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 1.6e-06 55.8 30 73.3
MCO09G309 Micromonas commoda HOM05D004530 ORTHO05D005839 1.6e-06 55.8 65 41.5
Cre16.g664050 Chlamydomonas reinhardtii HOM05D004530 ORTHO05D005839 2.1e-06 55.5 35 65.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (3 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings