Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.0e-157 560.1 292 100.0
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 6.6e-157 557.4 292 99.7
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 4.8e-123 444.9 297 83.2
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.1e-114 417.2 292 77.1
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 2.4e-114 416.0 287 75.3
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 1.7e-112 409.8 322 70.5
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 2.2e-107 392.9 292 75.3
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 2.8e-107 392.5 303 68.6
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 4.1e-106 388.7 282 73.0
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 1.6e-105 386.7 305 71.8
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.5e-105 385.2 302 68.5
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 4.5e-105 385.2 305 71.5
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 5.9e-105 384.8 305 71.5
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 1.0e-104 384.0 306 67.0
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 3.8e-104 382.1 295 72.9
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 1.9e-103 379.8 287 73.5
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 1.9e-103 379.8 306 67.0
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 2.5e-103 379.4 294 72.4
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 3.2e-103 379.0 308 70.1
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 3.2e-103 379.0 294 72.1
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 3.2e-103 379.0 281 73.7
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 1.6e-102 376.7 285 68.8
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 2.1e-102 376.3 307 65.8
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 8.0e-102 374.4 298 72.1
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 3.0e-101 372.5 301 66.4
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.5e-100 370.2 305 69.2
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 4.4e-100 368.6 239 77.0
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 5.7e-100 368.2 307 69.1
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 5.7e-100 368.2 299 64.9
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 7.5e-100 367.9 294 71.4
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 8.2e-99 364.4 302 68.9
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 1.4e-98 363.6 303 68.3
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 7.0e-98 361.3 299 68.2
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 5.9e-97 358.2 295 65.4
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 7.7e-97 357.8 317 66.6
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 1.3e-96 357.1 298 68.1
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 1.7e-96 356.7 266 74.1
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 6.5e-96 354.8 294 69.7
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 1.1e-95 354.0 294 68.0
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 2.5e-95 352.8 289 69.2
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 4.2e-95 352.1 299 62.5
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 1.2e-94 350.5 297 69.0
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-94 350.1 288 67.7
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 2.1e-94 349.7 296 67.9
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 2.7e-94 349.4 301 67.4
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 2.7e-94 349.4 272 69.9
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 1.0e-93 347.4 296 67.6
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 1.8e-93 346.7 302 65.9
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 2.3e-93 346.3 246 71.5
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 5.2e-93 345.1 259 73.7
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 5.2e-93 345.1 301 66.1
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 6.8e-93 344.7 259 74.1
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 8.8e-93 344.4 233 74.7
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 4.4e-92 342.0 309 65.7
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 9.8e-92 340.9 290 64.8
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 1.7e-91 340.1 256 68.8
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 2.2e-91 339.7 212 78.8
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 8.3e-91 337.8 310 60.3
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 1.1e-90 337.4 233 77.3
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 1.8e-90 336.7 268 66.8
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 1.6e-89 333.6 231 81.0
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 2.0e-89 333.2 233 76.0
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 2.7e-89 332.8 235 77.0
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 5.9e-89 331.6 291 62.9
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.3e-88 330.5 242 73.6
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 1.3e-88 330.5 296 64.5
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-88 330.5 296 64.5
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 1.7e-88 330.1 213 75.6
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 3.8e-88 328.9 293 64.8
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 5.0e-88 328.6 300 60.7
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 6.5e-88 328.2 270 68.9
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.1e-87 327.4 296 64.2
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 2.5e-87 326.2 295 65.1
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 2.5e-87 326.2 219 78.1
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 5.5e-87 325.1 291 65.6
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 1.2e-86 323.9 302 62.3
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 1.2e-86 323.9 294 61.6
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.6e-86 323.6 292 64.4
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.6e-84 316.2 294 64.3
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 3.4e-84 315.8 279 61.3
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 5.7e-84 315.1 256 62.5
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 9.8e-84 314.3 255 70.6
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 1.7e-83 313.5 217 70.0
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.8e-83 312.8 194 76.3
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 6.3e-83 311.6 254 66.5
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 7.0e-82 308.1 258 65.1
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-81 307.0 192 77.6
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 5.9e-81 305.1 312 59.9
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 5.9e-81 305.1 260 65.0
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 5.0e-80 302.0 217 71.0
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 5.0e-80 302.0 202 76.7
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 2.5e-79 299.7 263 68.1
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 4.3e-79 298.9 240 65.4
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 4.3e-79 298.9 264 57.6
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 2.1e-78 296.6 314 54.1
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 6.8e-77 291.6 262 62.6
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 1.4e-74 283.9 215 68.4
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 5.9e-73 278.5 250 57.6
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 1.0e-72 277.7 146 88.4
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 1.0e-72 277.7 255 57.3
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 3.0e-72 276.2 292 57.2
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 3.0e-72 276.2 209 66.0
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.3e-64 250.0 247 55.1
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 4.7e-62 242.3 120 95.8
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 5.4e-58 228.8 229 61.1
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 2.3e-48 196.8 232 52.6
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.4e-45 186.8 155 65.2
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.3e-43 181.0 134 65.7
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 4.9e-35 152.5 121 71.1
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.4e-34 151.0 179 57.5
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 3.0e-32 143.3 176 44.9
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 1.1e-29 134.8 204 42.6
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 6.9e-29 132.1 179 46.4
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 9.0e-29 131.7 132 59.1
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 1.2e-28 131.3 122 60.7
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 2.6e-28 130.2 112 67.0
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 1.1e-26 124.8 135 53.3
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 1.5e-23 114.4 64 82.8
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.6e-20 103.6 77 68.8
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 2.2e-19 100.5 180 34.4
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 6.7e-16 89.0 107 43.9
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 1.5e-15 87.8 55 74.5
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 1.3e-14 84.7 102 50.0
Cpa.g.sc685.1 Carica papaya HOM05D006234 ORTHO05D007813 1.5e-12 77.8 112 47.3
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 7.2e-10 68.9 204 33.8
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 7.2e-10 68.9 189 33.9
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 7.2e-10 68.9 136 36.0
FvH4_4g10900 Fragaria vesca HOM05D001043 ORTHO05D006432 4.6e-09 66.2 137 35.8
FAN12G0575 Fragaria x ananassa HOM05D001043 ORTHO05D006432 6.1e-09 65.9 137 35.8
FAN17G1903 Fragaria x ananassa HOM05D001043 ORTHO05D006432 6.7e-08 62.4 112 35.7
Potri.017G027000 Populus trichocarpa HOM05D001043 ORTHO05D006432 6.7e-08 62.4 135 33.3
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 1.1e-07 61.6 143 32.9
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 1.5e-07 61.2 138 31.9
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 1.5e-07 61.2 137 34.3
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 1.9e-07 60.8 112 37.5
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 1.9e-07 60.8 30 93.3
RcHm_v2.0_Chr4g0406481 Rosa chinensis HOM05D001043 ORTHO05D006432 2.5e-07 60.5 173 32.4
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 2.5e-07 60.5 54 61.1
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 3.3e-07 60.1 192 30.2
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 3.3e-07 60.1 142 35.2
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 9.7e-07 58.5 136 32.4
TAR636G2727 Trochodendron aralioides HOM05D001043 ORTHO05D006432 9.7e-07 58.5 120 37.5
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 1.3e-06 58.2 190 31.1
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 2.2e-06 57.4 164 31.7
Gorai.005G015800 Gossypium raimondii HOM05D001043 ORTHO05D006432 2.2e-06 57.4 133 33.8
VMungo1127G0978 Vigna mungo HOM05D001043 ORTHO05D006432 2.2e-06 57.4 114 36.8
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 2.8e-06 57.0 186 30.1
Gohir.D02G012400 Gossypium hirsutum HOM05D001043 ORTHO05D006432 2.8e-06 57.0 133 33.8
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 3.7e-06 56.6 101 36.6
Gohir.A02G011600 Gossypium hirsutum HOM05D001043 ORTHO05D006432 4.8e-06 56.2 133 33.8
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 4.8e-06 56.2 193 29.0
Potri.007G130900 Populus trichocarpa HOM05D001043 ORTHO05D006432 4.8e-06 56.2 165 30.9
arahy.Tifrunner.gnm1.ann1.41HRQM Arachis hypogaea HOM05D001043 ORTHO05D006432 6.3e-06 55.8 136 32.4
Hund12412 Selenicereus undatus HOM05D001043 ORTHO05D006432 6.3e-06 55.8 134 29.1

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (2 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (3 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (2 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (8 genes)
Glycine max (5 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (3 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (7 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (3 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (3 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings