Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044840 Camellia sinensis var. sinensis HOM05D007676 ORTHO05D009456 4.4e-67 257.7 119 100.0
Rhsim06G0138800 Rhododendron simsii HOM05D000658 ORTHO05D000826 1.4e-17 93.2 78 50.0
Manes.13G143800 Manihot esculenta HOM05D007676 ORTHO05D009456 1.3e-13 80.1 91 41.8
Peaxi162Scf00008g00063 Petunia axillaris HOM05D007676 ORTHO05D009456 2.8e-13 79.0 116 41.4
Gohir.D01G017700 Gossypium hirsutum HOM05D007676 ORTHO05D009456 1.0e-10 70.5 107 35.5
Gorai.002G020000 Gossypium raimondii HOM05D007676 ORTHO05D009456 3.8e-10 68.6 107 34.6
Gohir.A01G019100 Gossypium hirsutum HOM05D007676 ORTHO05D009456 5.0e-10 68.2 107 34.6
Thecc.01G343500 Theobroma cacao HOM05D000275 ORTHO05D000181 5.0e-10 68.2 123 35.0
vmacro12332 Vaccinium macrocarpon HOM05D000658 ORTHO05D000826 2.5e-09 65.9 69 47.8
Thecc.02G183500 Theobroma cacao HOM05D007676 ORTHO05D009456 3.2e-09 65.5 101 30.7
Manes.12G089100 Manihot esculenta HOM05D007676 ORTHO05D009456 9.4e-09 63.9 119 35.3
FAN10G1205 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.6e-08 63.2 125 27.2
FAN10G2621 Fragaria x ananassa HOM05D000275 ORTHO05D000181 1.6e-08 63.2 125 27.2
Solyc10g008205.2 Solanum lycopersicum HOM05D007676 ORTHO05D009456 2.1e-08 62.8 94 36.2
FvH4_7g16320 Fragaria vesca HOM05D000275 ORTHO05D000181 2.7e-08 62.4 120 29.2
FAN06G2922 Fragaria x ananassa HOM05D000275 ORTHO05D000181 2.7e-08 62.4 120 29.2
FAN06G3596 Fragaria x ananassa HOM05D000275 ORTHO05D000181 2.7e-08 62.4 120 29.2
Ciclev10018195m.g Citrus clementina HOM05D007676 ORTHO05D009456 4.7e-08 61.6 119 32.8
FAN03G3319 Fragaria x ananassa HOM05D000275 ORTHO05D000181 7.9e-08 60.8 118 28.8
RcHm_v2.0_Chr2g0127571 Rosa chinensis HOM05D007676 ORTHO05D009456 1.4e-07 60.1 77 33.8
RcHm_v2.0_Chr2g0127591 Rosa chinensis HOM05D007676 ORTHO05D009456 1.4e-07 60.1 114 30.7
Eucgr.A01837 Eucalyptus grandis HOM05D007676 ORTHO05D009456 1.8e-07 59.7 101 31.7
TPR.G4950 Trifolium pratense HOM05D000275 ORTHO05D000181 6.7e-07 57.8 101 31.7
Carub.0007s1233 Capsella rubella HOM05D007676 ORTHO05D009456 1.1e-06 57.0 127 29.1
MBI02_g15133_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 1.5e-06 56.6 105 28.6
Nn4g24938 Nelumbo nucifera HOM05D000275 ORTHO05D000181 2.0e-06 56.2 95 30.5
C07p56160 Brassica napus HOM05D000223 ORTHO05D000736 2.6e-06 55.8 128 28.9
Potri.007G138400 Populus trichocarpa HOM05D007676 ORTHO05D009456 3.3e-06 55.5 112 33.0
Manes.05G054100 Manihot esculenta HOM05D000275 ORTHO05D000181 4.4e-06 55.1 101 29.7
BolC7t46093H Brassica oleracea HOM05D007676 ORTHO05D009456 5.7e-06 54.7 128 28.1
Migut.N01742 Erythranthe guttata HOM05D000275 ORTHO05D000181 5.7e-06 54.7 113 28.3
Migut.N01746 Erythranthe guttata HOM05D000275 ORTHO05D000181 7.4e-06 54.3 113 28.3
Migut.N01747 Erythranthe guttata HOM05D000275 ORTHO05D000181 7.4e-06 54.3 113 28.3
Migut.N01748 Erythranthe guttata HOM05D000275 ORTHO05D000181 7.4e-06 54.3 113 28.3
MBI02_g11175_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 9.7e-06 53.9 102 25.5
MBI02_g17304_MAGBIO Magnolia biondii HOM05D000275 ORTHO05D000181 9.7e-06 53.9 102 25.5

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (4 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (5 genes)
Glycine max (0 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (3 genes)
Malus domestica (0 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (2 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings