Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043341 Camellia sinensis var. sinensis HOM05D005283 ORTHO05D006769 0.0e+00 1812.7 884 100.0
Dinv29746 Davidia involucrata HOM05D005283 ORTHO05D006769 0.0e+00 1487.6 880 83.4
vmacro08159 Vaccinium macrocarpon HOM05D005283 ORTHO05D006769 0.0e+00 1484.9 928 79.1
Dinv44377 Davidia involucrata HOM05D005283 ORTHO05D006769 0.0e+00 1459.1 855 84.7
Rhsim04G0223000 Rhododendron simsii HOM05D005283 ORTHO05D006769 0.0e+00 1416.0 1006 72.2
Cfa015392 Carpinus fangiana HOM05D005283 ORTHO05D006769 0.0e+00 1398.3 883 78.8
Haze_01194 Corylus avellana HOM05D005283 ORTHO05D006769 0.0e+00 1390.6 889 78.1
QL06p009017 Quercus lobata HOM05D005283 ORTHO05D006769 0.0e+00 1379.0 888 77.5
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 0.0e+00 1372.8 881 79.2
Prupe.1G135400 Prunus persica HOM05D005283 ORTHO05D006769 0.0e+00 1371.7 885 78.4
TAR362G0604 Trochodendron aralioides HOM05D005283 ORTHO05D006769 0.0e+00 1370.9 924 74.4
MD08G1066800 Malus domestica HOM05D005283 ORTHO05D006769 0.0e+00 1369.8 883 77.3
MD13G1167900 Malus domestica HOM05D005283 ORTHO05D006769 0.0e+00 1367.4 885 77.6
Nn3g21453 Nelumbo nucifera HOM05D005283 ORTHO05D006769 0.0e+00 1359.7 884 77.5
Thecc.04G285400 Theobroma cacao HOM05D005283 ORTHO05D006769 0.0e+00 1358.6 887 76.6
RcHm_v2.0_Chr4g0422381 Rosa chinensis HOM05D005283 ORTHO05D006769 0.0e+00 1357.0 872 77.2
Potri.010G014000 Populus trichocarpa HOM05D005283 ORTHO05D006769 0.0e+00 1346.6 850 78.0
TWI09G0775 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 0.0e+00 1330.1 885 75.5
Ciclev10004285m.g Citrus clementina HOM05D005283 ORTHO05D006769 0.0e+00 1327.8 883 75.8
FAN12G1245 Fragaria x ananassa HOM05D005283 ORTHO05D006769 0.0e+00 1326.6 858 76.6
FAN12G0573 Fragaria x ananassa HOM05D005283 ORTHO05D006769 0.0e+00 1323.9 858 76.5
CANSAT78G0446 Cannabis sativa HOM05D005283 ORTHO05D006769 0.0e+00 1320.8 883 73.8
FvH4_4g18240 Fragaria vesca HOM05D005283 ORTHO05D006769 0.0e+00 1319.3 858 76.3
MBI18_g13696_MAGBIO Magnolia biondii HOM05D005283 ORTHO05D006769 0.0e+00 1309.7 884 75.1
TWI53G1858 Tripterygium wilfordii HOM05D005283 ORTHO05D006769 0.0e+00 1306.6 885 75.1
CiPaw.01G148000 Carya illinoinensis HOM05D005283 ORTHO05D006769 0.0e+00 1304.3 883 73.8
CsaV3_3G014700 Cucumis sativus L. HOM05D005283 ORTHO05D006769 0.0e+00 1302.3 881 73.0
Nitab4.5_0001120g0020 Nicotiana tabacum HOM05D005283 ORTHO05D006769 0.0e+00 1295.4 879 73.3
DCAR_027073 Daucus carota HOM05D005283 ORTHO05D006769 0.0e+00 1294.6 858 74.5
CAN.G185.38 Capsicum annuum HOM05D005283 ORTHO05D006769 0.0e+00 1278.1 864 73.3
ClCG05G006140 Citrullus lanatus HOM05D005283 ORTHO05D006769 0.0e+00 1276.9 881 72.0
Duzib151G1199 Durio zibethinus HOM05D005283 ORTHO05D006769 0.0e+00 1276.9 868 75.2
Sopen01g032430 Solanum pennellii HOM05D005283 ORTHO05D006769 0.0e+00 1258.0 894 70.9
MELO3C006668.2 Cucumis melo HOM05D005283 ORTHO05D006769 0.0e+00 1252.7 906 69.8
Solyc01g080620.3 Solanum lycopersicum HOM05D005283 ORTHO05D006769 0.0e+00 1251.5 890 71.0
PSO170G5664 Papaver somniferum HOM05D005283 ORTHO05D006769 0.0e+00 1243.4 867 72.8
PSO210G5109 Papaver somniferum HOM05D005283 ORTHO05D006769 0.0e+00 1242.3 879 71.7
Peaxi162Scf01123g00233 Petunia axillaris HOM05D005283 ORTHO05D006769 0.0e+00 1239.9 857 72.5
Cc03_g01850 Coffea canephora HOM05D005283 ORTHO05D006769 0.0e+00 1238.0 884 70.8
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea HOM05D005283 ORTHO05D006769 0.0e+00 1237.6 894 70.4
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea HOM05D005283 ORTHO05D006769 0.0e+00 1237.6 894 70.4
PGR031G1610 Punica granatum HOM05D005283 ORTHO05D006769 0.0e+00 1236.1 887 71.6
Sed0007600 Sechium edule HOM05D005283 ORTHO05D006769 0.0e+00 1235.3 854 71.5
Sabra10G0008900 Salix brachista HOM05D005283 ORTHO05D006769 0.0e+00 1231.1 793 77.3
Aqoxy2G02976 Aquilegia oxysepala HOM05D005283 ORTHO05D006769 0.0e+00 1227.6 877 71.0
Glyma.07G247100 Glycine max HOM05D005283 ORTHO05D006769 0.0e+00 1226.5 850 72.5
Gorai.005G060600 Gossypium raimondii HOM05D005283 ORTHO05D006769 0.0e+00 1226.5 892 70.7
Gohir.D02G054700 Gossypium hirsutum HOM05D005283 ORTHO05D006769 0.0e+00 1222.2 892 70.5
Lalb_Chr18g0051671 Lupinus albus HOM05D005283 ORTHO05D006769 0.0e+00 1222.2 841 72.8
Migut.G00154 Erythranthe guttata HOM05D005283 ORTHO05D006769 0.0e+00 1217.2 877 70.2
Gohir.A02G049600 Gossypium hirsutum HOM05D005283 ORTHO05D006769 0.0e+00 1212.2 892 70.3
Nitab4.5_0000059g0420 Nicotiana tabacum HOM05D005283 ORTHO05D006769 0.0e+00 1206.4 882 69.2
FAN17G2169 Fragaria x ananassa HOM05D005283 ORTHO05D006769 0.0e+00 1206.0 950 65.9
Glyma.17G026900 Glycine max HOM05D005283 ORTHO05D006769 0.0e+00 1202.2 851 71.3
Phvul.003G105900 Phaseolus vulgaris HOM05D005283 ORTHO05D006769 0.0e+00 1197.2 872 70.3
MSTRG.3910 Avicennia marina HOM05D005283 ORTHO05D006769 0.0e+00 1192.2 883 69.0
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 0.0e+00 1188.7 850 70.7
Atru.BG.90.p Acer truncatum HOM05D005283 ORTHO05D006769 0.0e+00 1188.3 846 71.7
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 0.0e+00 1180.6 868 71.1
Psat4g027360 Pisum sativum HOM05D005283 ORTHO05D006769 0.0e+00 1178.3 889 69.3
Medtr4g119960 Medicago truncatula HOM05D005283 ORTHO05D006769 0.0e+00 1170.2 885 69.3
Manes.03G195900 Manihot esculenta HOM05D005283 ORTHO05D006769 0.0e+00 1169.5 839 71.5
Eucgr.B01324 Eucalyptus grandis HOM05D005283 ORTHO05D006769 0.0e+00 1167.1 811 72.6
TPR.G3193 Trifolium pratense HOM05D005283 ORTHO05D006769 0.0e+00 1156.7 953 64.8
HanXRQChr13g0411191 Helianthus annuus HOM05D005283 ORTHO05D006769 0.0e+00 1137.9 874 67.0
Lj4g0026758 Lotus japonicus HOM05D005283 ORTHO05D006769 0.0e+00 1134.8 857 67.9
AUR62041505 Chenopodium quinoa HOM05D005283 ORTHO05D006769 0.0e+00 1134.4 860 67.0
Oeu029706.1 Olea europaea HOM05D005283 ORTHO05D000116 0.0e+00 1132.1 869 67.2
ATR0796G268 Amborella trichopoda HOM05D005283 ORTHO05D006769 0.0e+00 1118.6 888 66.2
Lsat_1_v5_gn_5_54040 Lactuca sativa HOM05D005283 ORTHO05D006769 0.0e+00 1113.2 870 66.0
ECA240G0403 Erigeron canadensis HOM05D005283 ORTHO05D006769 0.0e+00 1112.8 848 67.5
Sc25g0004780 Simmondsia chinensis HOM05D005283 ORTHO05D006769 0.0e+00 1111.3 858 67.1
THA.LOC104820270 Tarenaya hassleriana HOM05D005283 ORTHO05D006769 0.0e+00 1109.0 851 66.2
EL10Ac3g06605 Beta vulgaris HOM05D005283 ORTHO05D006769 0.0e+00 1099.3 849 66.1
Ah.13g074630 Amaranthus hybridus HOM05D005283 ORTHO05D006769 6.0e-312 1073.9 866 65.0
SGA_v2.0_scaffold18G08298 Striga asiatica HOM05D005283 ORTHO05D006769 3.8e-304 1048.1 894 62.6
Sp7g14240 Schrenkiella parvula HOM05D005283 ORTHO05D006769 1.4e-295 1019.6 851 62.0
AT4G15840 Arabidopsis thaliana HOM05D005283 ORTHO05D006769 5.4e-295 1017.7 850 62.5
Carub.0007s2581 Capsella rubella HOM05D005283 ORTHO05D006769 1.7e-293 1012.7 851 61.5
Thhalv10024402m.g Eutrema salsugineum HOM05D005283 ORTHO05D006769 2.3e-293 1012.3 851 61.7
CARHR290370 Cardamine hirsuta HOM05D005283 ORTHO05D006769 9.0e-290 1000.3 850 61.8
CDE05G1280 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 1.2e-289 1000.0 859 61.4
AL7G39450 Arabidopsis lyrata HOM05D005283 ORTHO05D006769 7.6e-289 997.3 851 61.1
C07p47430 Brassica napus HOM05D005283 ORTHO05D006769 8.7e-285 983.8 852 60.9
BolC7t45270H Brassica oleracea HOM05D005283 ORTHO05D006769 8.7e-285 983.8 852 60.9
BcaC06g32968 Brassica carinata HOM05D005283 ORTHO05D006769 2.4e-282 975.7 850 60.4
Os01g0932600 Oryza sativa ssp. japonica HOM05D005283 ORTHO05D006769 3.1e-282 975.3 848 61.3
A03p49360 Brassica napus HOM05D005283 ORTHO05D006769 5.3e-282 974.5 849 61.4
BraA03t14037Z Brassica rapa HOM05D005283 ORTHO05D006769 2.0e-281 972.6 849 61.0
Zm00001eb142310 Zea mays HOM05D005283 ORTHO05D006769 1.1e-279 966.8 844 60.7
BcaC06g33444 Brassica carinata HOM05D005283 ORTHO05D006769 3.9e-277 958.4 851 59.6
Hund20553 Selenicereus undatus HOM05D005283 ORTHO05D006769 3.7e-275 951.8 759 64.7
CDE11G0961 Ceratophyllum demersum HOM05D005283 ORTHO05D006769 3.7e-267 925.2 859 58.3
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla HOM05D005283 ORTHO05D006769 1.0e-261 907.1 792 62.6
Zm00001eb363540 Zea mays HOM05D005283 ORTHO05D006769 6.1e-254 881.3 790 59.9
HPP92_002145 Vanilla planifolia HOM05D005283 ORTHO05D006769 8.2e-235 817.8 718 60.9
COL.COLO4_13862 Corchorus olitorius HOM05D005283 ORTHO05D006769 1.1e-234 817.4 888 53.2
GSVIVG01017732001 Vitis vinifera HOM05D005283 ORTHO05D006769 2.0e-228 796.6 523 77.4
Actinidia40275 Actinidia chinensis HOM05D005283 ORTHO05D006769 2.0e-212 743.4 397 89.9
Actinidia40274 Actinidia chinensis HOM05D005283 ORTHO05D006769 4.9e-203 712.2 445 79.6
Cpa.g.sc66.36 Carica papaya HOM05D005283 ORTHO05D006769 9.2e-202 708.0 620 60.8
Pp3c5_16090 Physcomitrium patens HOM05D005283 ORTHO05D006769 1.2e-201 707.6 896 47.7
Pp3c6_10590 Physcomitrium patens HOM05D005283 ORTHO05D006769 3.6e-198 696.0 907 46.4
Lj6C677T9 Lonicera japonica HOM05D005283 ORTHO05D006769 3.5e-185 652.9 476 72.1
Atru.chr4.2851 Acer truncatum HOM05D005283 ORTHO05D006769 1.8e-181 640.6 369 84.6
Lj6A677G73 Lonicera japonica HOM05D005283 ORTHO05D006769 7.8e-177 625.2 412 75.7
Pp3c16_9230 Physcomitrium patens HOM05D005283 ORTHO05D006769 6.7e-168 595.5 836 44.5
TAR633G1039 Trochodendron aralioides HOM05D005283 ORTHO05D006769 1.8e-160 570.9 395 73.9
AUR62042850 Chenopodium quinoa HOM05D005283 ORTHO05D006769 1.1e-141 508.4 510 54.3
TAR633G2729 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.2e-123 447.6 276 78.3
Actinidia26773 Actinidia chinensis HOM05D005283 ORTHO05D006769 2.2e-110 404.4 282 75.5
unitig_748.g8731 Utricularia gibba HOM05D005283 ORTHO05D006769 8.6e-99 365.9 378 52.9
SEGI_38162 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 2.9e-94 350.9 555 41.4
SEGI_40593 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 2.9e-94 350.9 555 41.4
unitig_748.g8730 Utricularia gibba HOM05D005283 ORTHO05D006769 3.1e-88 330.9 282 59.6
GSVIVG01017731001 Vitis vinifera HOM05D005283 ORTHO05D006769 7.8e-84 316.2 175 86.9
Pp3c20_17000 Physcomitrium patens HOM05D005283 ORTHO05D006769 3.3e-82 310.8 369 48.8
TAR633G1238 Trochodendron aralioides HOM05D005283 ORTHO05D006769 2.5e-74 284.6 151 88.7
PRCOL_00005501 Prasinoderma coloniale HOM05D005283 ORTHO05D006769 4.3e-74 283.9 865 29.0
HPP92_002144 Vanilla planifolia HOM05D005283 ORTHO05D006769 1.1e-64 252.7 137 86.9
FAN07G0879 Fragaria x ananassa HOM05D005283 ORTHO05D006769 5.3e-64 250.4 145 84.1
SEGI_08317 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 1.1e-58 232.6 174 66.1
SEGI_24032 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 6.0e-52 210.3 117 80.3
SEGI_35628 Sequoiadendron giganteum HOM05D005283 ORTHO05D006769 9.9e-47 193.0 308 37.7
Mapoly0037s0064 Marchantia polymorpha HOM05D005283 ORTHO05D006769 1.5e-42 179.1 247 39.3
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 3.8e-38 164.5 185 51.9
MCO04G464 Micromonas commoda HOM05D005283 ORTHO05D006769 4.2e-29 134.4 225 36.9
BolC4t27184H Brassica oleracea HOM05D005283 ORTHO05D006769 3.1e-24 118.2 129 48.8
Cpa.g.sc66.37 Carica papaya HOM05D005283 ORTHO05D006769 3.4e-23 114.8 91 65.9
A04p20740 Brassica napus HOM05D005283 ORTHO05D006769 1.0e-22 113.2 161 38.5
BcaC05g28381 Brassica carinata HOM05D005283 ORTHO05D021637 7.0e-16 90.5 58 67.2
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-15 89.4 81 56.8
C04p56580 Brassica napus HOM05D005283 ORTHO05D006769 4.5e-15 87.8 129 39.5
Cfa001632 Carpinus fangiana HOM05D005283 ORTHO05D006769 5.9e-15 87.4 221 26.7
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-14 85.1 55 72.7
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-14 84.7 55 72.7
BcaC02g08264 Brassica carinata HOM05D005283 ORTHO05D006769 1.0e-11 76.6 118 39.0
HanXRQChr14g0449221 Helianthus annuus HOM05D005283 ORTHO05D006769 2.6e-10 72.0 74 54.1
Cpa.g.c37401 Carica papaya HOM05D005283 ORTHO05D006769 9.7e-10 70.1 33 87.9
HanXRQChr12g0372601 Helianthus annuus HOM05D005283 ORTHO05D006769 1.7e-09 69.3 62 58.1
VMungo1127G0889 Vigna mungo HOM05D005283 ORTHO05D006769 6.3e-09 67.4 61 57.4

Acer truncatum (2 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (3 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (15 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (4 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (5 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (2 genes)

Program Settings