Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 4463.3 2227 100.0
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 4370.1 2227 98.4
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 3522.6 2227 79.9
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 0.0e+00 3516.9 2229 79.9
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 0.0e+00 3440.2 2253 77.6
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 3374.3 2232 76.4
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 3372.8 2232 76.4
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 3239.9 2232 73.8
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 0.0e+00 3021.9 2233 69.2
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 0.0e+00 2975.3 2236 68.4
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 0.0e+00 2966.4 2236 68.2
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 0.0e+00 2962.2 2236 67.9
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 0.0e+00 2938.7 2240 67.6
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 0.0e+00 2927.9 2236 67.1
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2898.6 2236 66.3
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 2887.8 2239 66.5
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2886.3 2325 65.7
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2885.5 2235 66.0
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 0.0e+00 2874.0 2241 66.0
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 0.0e+00 2868.6 2212 66.4
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2861.6 2236 65.7
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 0.0e+00 2857.4 2236 65.8
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 0.0e+00 2830.4 2237 65.6
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 0.0e+00 2825.0 2241 64.8
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 2818.1 2237 65.4
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 0.0e+00 2817.3 2244 65.3
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2795.4 2237 64.4
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 0.0e+00 2792.7 2235 64.6
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 0.0e+00 2775.0 2238 64.2
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 0.0e+00 2755.7 2255 63.5
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 0.0e+00 2729.9 2251 63.6
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 0.0e+00 2729.1 2234 64.1
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 0.0e+00 2713.3 2240 63.2
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 0.0e+00 2710.6 2238 63.4
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 0.0e+00 2710.3 2234 63.1
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2706.4 2236 63.1
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 0.0e+00 2704.9 2239 63.1
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 0.0e+00 2704.1 2235 63.1
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 0.0e+00 2695.2 2253 63.0
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 0.0e+00 2690.2 2233 63.0
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 0.0e+00 2679.4 2234 62.6
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 0.0e+00 2664.8 2235 62.3
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 0.0e+00 2653.6 2233 61.6
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 0.0e+00 2649.4 2268 62.2
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 0.0e+00 2646.7 2236 61.5
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 0.0e+00 2645.2 2240 61.9
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 0.0e+00 2638.6 2249 62.3
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 0.0e+00 2637.8 2232 61.3
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 0.0e+00 2632.4 2240 61.7
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 0.0e+00 2631.3 2249 62.2
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 0.0e+00 2621.7 2240 61.9
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2620.9 2247 60.9
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2613.2 2244 60.8
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 0.0e+00 2593.1 2241 61.0
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 0.0e+00 2589.3 2249 60.7
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 0.0e+00 2588.5 2249 60.7
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2579.7 2233 61.5
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 0.0e+00 2575.8 2247 60.4
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 0.0e+00 2573.9 2248 60.5
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 0.0e+00 2567.3 2241 60.5
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 0.0e+00 2562.3 2244 60.5
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 0.0e+00 2560.4 2239 60.5
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2546.5 2234 61.1
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2545.8 2236 61.0
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2543.8 2244 60.0
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 2541.5 2244 60.2
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 0.0e+00 2526.1 2242 59.1
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 0.0e+00 2478.4 2273 58.5
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 0.0e+00 2453.3 1825 67.7
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 0.0e+00 2440.6 2249 58.9
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 0.0e+00 2435.6 2261 59.0
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 0.0e+00 2434.8 2247 58.7
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 0.0e+00 2424.8 2251 58.9
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 0.0e+00 2424.4 2252 58.7
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2422.5 2250 58.8
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 0.0e+00 2422.5 2250 58.8
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2415.6 2246 58.7
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 0.0e+00 2415.6 2246 58.7
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 0.0e+00 2412.1 1824 67.6
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 0.0e+00 2406.7 2243 58.4
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2398.6 1898 64.7
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 0.0e+00 2330.4 1838 66.2
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 0.0e+00 2307.7 2250 57.0
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 0.0e+00 2255.3 2072 59.1
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 0.0e+00 2248.8 2331 53.1
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 0.0e+00 2239.9 2241 55.5
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 2210.3 1717 66.7
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 0.0e+00 2153.3 2266 53.2
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 0.0e+00 2071.6 2249 52.4
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 0.0e+00 1890.2 1424 68.4
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 0.0e+00 1818.9 2388 44.3
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 0.0e+00 1762.3 1393 66.8
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 0.0e+00 1629.4 1710 52.7
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 0.0e+00 1464.5 2364 40.1
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 0.0e+00 1457.6 2197 41.5
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1448.0 1068 70.7
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 0.0e+00 1412.5 2355 38.2
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1302.3 1021 65.3
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 1292.3 1127 60.9
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 0.0e+00 1281.9 2273 36.6
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1279.6 1204 57.7
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 1242.6 943 67.1
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 1160.2 1019 62.7
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 0.0e+00 1127.5 1429 47.1
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 0.0e+00 1091.6 790 71.9
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 2.1e-266 924.1 3050 27.6
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 2.9e-236 823.9 880 51.9
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 2.6e-229 800.8 735 58.8
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 8.5e-212 742.7 1369 37.0
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 8.0e-178 629.8 1023 41.8
Cpa.g.sc14.9 Carica papaya HOM05D005746 ORTHO05D007105 1.2e-149 536.2 437 60.0
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 1.2e-144 519.6 2374 25.3
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 6.0e-117 427.6 377 58.9
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 3.3e-91 342.0 338 54.4
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.6e-80 306.6 314 52.9
Migut.L00530 Erythranthe guttata HOM05D005746 ORTHO05D007105 7.7e-80 304.3 769 31.7
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 2.2e-74 286.2 290 56.6
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 7.7e-72 277.7 326 48.8
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 5.0e-71 275.0 234 60.7
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 9.8e-59 234.2 234 53.8
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 1.9e-57 229.9 282 46.5
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 1.6e-53 216.9 175 66.3
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.1e-41 177.6 224 46.0
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 2.7e-40 172.9 140 65.0
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 2.1e-37 163.3 144 60.4
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 1.5e-35 157.1 95 82.1
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 4.4e-35 155.6 486 27.2
Gohir.A11G290200 Gossypium hirsutum HOM05D005746 ORTHO05D007105 6.2e-29 135.2 117 58.1
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 2.9e-26 126.3 254 33.5
VMungo1127G1975 Vigna mungo HOM05D005746 ORTHO05D007105 4.2e-25 122.5 111 63.1
VMungo0331G1774 Vigna mungo HOM05D005746 ORTHO05D007105 2.3e-23 116.7 102 57.8
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.0e-15 91.3 284 28.5
Cfa022176 Carpinus fangiana HOM05D005746 ORTHO05D125765 1.2e-08 67.8 570 20.2

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (3 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (9 genes)
Cardamine hirsuta (2 genes)
Carica papaya (2 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (3 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (1 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (6 genes)
Vanilla planifolia (1 genes)
Vigna mungo (5 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings