Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041108 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.2e-277 959.1 480 100.0
CSS0044449 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 2.5e-177 625.9 449 76.4
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 2.9e-165 585.9 475 64.8
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 4.4e-158 562.0 474 63.1
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 6.0e-155 551.6 476 62.8
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 3.1e-151 539.3 475 60.4
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 1.1e-140 504.2 474 57.0
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 9.3e-132 474.6 479 53.2
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 2.1e-131 473.4 476 53.6
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 3.5e-131 472.6 475 53.7
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 5.1e-130 468.8 478 53.8
Oeu001936.1 Olea europaea HOM05D004333 ORTHO05D005363 2.5e-129 466.5 472 51.3
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 3.5e-123 446.0 476 50.2
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 6.7e-122 441.8 476 50.8
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 1.1e-121 441.0 473 49.5
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 9.6e-121 438.0 478 50.2
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 1.3e-120 437.6 473 51.0
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 1.6e-120 437.2 471 51.2
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 6.2e-120 435.3 474 49.4
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.4e-117 424.9 473 48.0
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-116 424.5 473 48.0
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.2e-116 422.9 473 47.6
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.5e-116 422.2 497 48.7
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.6e-115 419.1 473 47.8
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.6e-115 419.1 473 47.6
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 6.1e-115 418.7 471 49.3
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 7.9e-115 418.3 473 48.0
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 1.8e-114 417.2 470 49.1
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 1.1e-113 414.5 473 47.4
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 3.3e-113 412.9 473 48.4
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.3e-113 412.5 473 47.4
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.3e-112 411.0 473 46.5
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 1.6e-112 410.6 481 48.6
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 4.8e-112 409.1 474 50.0
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.8e-111 407.1 476 47.3
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.8e-111 407.1 476 46.4
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 2.0e-110 403.7 475 49.3
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.2e-109 400.2 474 45.8
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 2.5e-108 396.7 474 47.7
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 1.2e-107 394.4 476 47.1
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 2.7e-107 393.3 476 48.3
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.9e-106 389.4 452 49.8
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 1.1e-105 387.9 468 45.5
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 2.0e-105 387.1 465 48.6
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 2.5e-105 386.7 470 46.4
Actinidia34248 Actinidia chinensis HOM05D004333 ORTHO05D005363 4.3e-105 386.0 312 64.7
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 9.7e-105 384.8 468 45.5
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.3e-104 384.4 474 47.9
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 3.7e-104 382.9 483 47.0
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 6.3e-104 382.1 472 47.5
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 8.2e-104 381.7 465 46.0
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 1.8e-103 380.6 478 43.9
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 4.1e-103 379.4 478 44.4
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 5.3e-103 379.0 464 45.7
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 1.2e-102 377.9 466 45.1
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 2.0e-102 377.1 473 44.8
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 5.9e-102 375.6 461 44.9
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 1.7e-101 374.0 466 45.1
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 3.8e-101 372.9 472 44.9
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 3.8e-101 372.9 478 43.5
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 8.5e-101 371.7 469 45.4
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 8.5e-101 371.7 480 43.1
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 1.1e-100 371.3 474 45.6
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.9e-100 370.5 476 46.4
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 9.4e-100 368.2 478 42.7
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 9.4e-100 368.2 475 44.0
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 1.6e-99 367.5 473 44.0
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 2.1e-99 367.1 473 44.2
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 2.7e-99 366.7 470 43.2
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 1.0e-98 364.8 470 43.4
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 1.5e-97 360.9 498 42.0
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 4.4e-97 359.4 470 43.2
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 5.7e-97 359.0 478 42.5
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.7e-96 357.5 473 41.6
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 1.7e-96 357.5 470 43.6
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 1.4e-95 354.4 474 44.3
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 1.4e-95 354.4 480 44.2
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 4.1e-95 352.8 473 41.0
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 4.1e-95 352.8 471 43.1
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 9.1e-95 351.7 471 42.5
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 1.6e-94 350.9 468 41.9
VMungo1309G1648 Vigna mungo HOM05D004333 ORTHO05D005363 1.6e-94 350.9 471 43.1
Carub.0006s2217 Capsella rubella HOM05D004333 ORTHO05D005363 3.5e-94 349.7 468 41.9
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 7.7e-94 348.6 477 41.5
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 1.0e-93 348.2 473 41.9
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 1.3e-93 347.8 475 41.1
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 2.2e-93 347.1 471 43.1
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 2.2e-93 347.1 471 43.1
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 6.5e-93 345.5 470 43.0
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 1.1e-92 344.7 469 43.5
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 1.5e-92 344.4 468 42.3
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 1.5e-92 344.4 468 42.5
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 4.2e-92 342.8 472 42.6
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 1.5e-89 334.3 475 39.2
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 6.3e-88 328.9 465 41.7
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 7.0e-87 325.5 469 40.9
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 1.6e-75 287.7 475 37.5
SHI08286 Sapria himalayana HOM05D004333 ORTHO05D005363 1.5e-68 264.6 339 44.2
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 8.3e-64 248.8 460 33.3
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.8e-63 247.7 490 35.5
CAN.G481.55 Capsicum annuum HOM05D004333 ORTHO05D005363 2.5e-60 237.3 320 43.8
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 1.3e-56 224.9 470 33.0
SEGI_10720 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 1.4e-50 204.9 476 31.3
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 3.1e-50 203.8 204 52.0
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 6.6e-45 186.0 191 57.6
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.2e-43 181.8 191 57.1
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 5.2e-42 176.4 442 28.7
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 1.2e-35 155.2 207 41.1
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 1.2e-33 148.7 220 40.5
CAN.G3762.1 Capsicum annuum HOM05D004333 ORTHO05D005363 9.3e-31 139.0 186 44.1
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 2.9e-24 117.5 96 60.4
Nitab4.5_0004178g0040 Nicotiana tabacum HOM05D004333 ORTHO05D005363 7.1e-23 112.8 128 48.4
Nitab4.5_0004178g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.7e-21 108.2 212 38.2
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 1.1e-20 105.5 496 24.4
SHI08287 Sapria himalayana HOM05D004333 ORTHO05D005363 5.6e-12 76.6 161 35.4
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 4.8e-11 73.6 125 30.4
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 2.5e-07 61.2 45 62.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings