Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 0.0e+00 1689.1 888 100.0
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1456.8 892 85.0
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 0.0e+00 1385.2 886 78.8
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 0.0e+00 1368.2 901 78.6
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 0.0e+00 1344.3 824 82.4
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 0.0e+00 1338.9 824 80.6
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1337.0 833 82.4
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1333.2 829 82.3
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 0.0e+00 1332.0 828 81.6
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 0.0e+00 1330.9 895 77.4
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 0.0e+00 1330.5 895 77.4
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 0.0e+00 1327.0 892 76.3
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 0.0e+00 1318.9 895 77.0
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 0.0e+00 1317.8 824 81.1
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 0.0e+00 1304.3 812 80.7
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 0.0e+00 1303.9 902 74.7
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 0.0e+00 1299.6 901 74.4
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 0.0e+00 1296.6 872 77.3
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 0.0e+00 1295.8 895 76.4
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 0.0e+00 1295.0 888 75.0
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 0.0e+00 1288.9 855 77.5
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 0.0e+00 1283.5 893 77.2
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 0.0e+00 1282.7 823 79.3
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 0.0e+00 1282.3 880 74.5
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 0.0e+00 1281.9 857 76.2
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1281.5 840 77.0
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 0.0e+00 1279.6 886 75.5
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 0.0e+00 1277.3 841 77.4
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1276.5 812 79.1
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 0.0e+00 1276.2 848 76.7
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 0.0e+00 1276.2 883 76.6
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 0.0e+00 1273.5 865 75.8
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1272.7 887 74.0
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 0.0e+00 1270.0 882 74.8
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1269.2 852 77.1
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1267.7 887 74.0
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1264.6 893 75.0
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 0.0e+00 1264.6 887 73.8
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1263.4 896 74.8
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 0.0e+00 1261.5 882 73.5
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1259.2 903 74.2
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 0.0e+00 1259.2 827 77.1
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1257.3 843 76.2
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 0.0e+00 1256.9 904 73.8
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 0.0e+00 1256.5 830 77.8
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 0.0e+00 1255.7 832 76.2
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 0.0e+00 1251.1 833 75.6
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 0.0e+00 1249.6 886 72.9
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 0.0e+00 1247.3 835 75.4
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 0.0e+00 1246.1 834 75.3
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 0.0e+00 1245.0 833 76.6
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 0.0e+00 1243.0 888 72.9
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 0.0e+00 1242.6 830 75.9
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 0.0e+00 1241.5 829 78.8
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 0.0e+00 1240.7 830 75.7
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 0.0e+00 1239.9 837 74.8
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 0.0e+00 1239.9 895 74.3
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 0.0e+00 1239.6 845 74.4
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 0.0e+00 1237.2 868 73.6
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1235.7 885 73.0
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 0.0e+00 1233.8 828 75.8
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 0.0e+00 1231.1 829 76.1
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 0.0e+00 1224.5 885 72.1
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 0.0e+00 1221.5 870 72.8
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1221.1 885 72.2
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 0.0e+00 1218.4 821 76.7
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 0.0e+00 1208.4 817 74.2
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 0.0e+00 1204.9 839 74.1
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 0.0e+00 1198.7 836 73.0
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 0.0e+00 1198.3 878 71.6
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 0.0e+00 1187.6 898 70.3
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 0.0e+00 1184.9 870 71.4
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1175.6 892 68.7
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 0.0e+00 1168.3 815 71.3
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1163.7 890 67.1
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 0.0e+00 1161.0 827 73.0
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 0.0e+00 1156.7 864 70.1
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 0.0e+00 1155.2 895 70.1
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 0.0e+00 1140.6 844 68.1
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 0.0e+00 1139.0 884 68.7
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 0.0e+00 1135.6 837 70.6
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 0.0e+00 1116.7 824 69.1
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 0.0e+00 1093.6 751 73.6
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 0.0e+00 1093.6 751 73.6
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 5.7e-284 981.1 825 64.6
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 3.7e-267 925.2 623 77.5
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.6e-262 909.8 552 82.6
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.8e-258 896.3 839 57.1
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 2.0e-241 839.7 564 76.6
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.7e-240 836.6 618 70.9
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 2.0e-236 823.2 815 54.0
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.3e-235 820.5 477 83.0
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 6.6e-232 808.1 519 79.0
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 6.6e-224 781.6 812 52.5
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.2e-212 744.2 502 78.5
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 6.0e-201 705.3 482 75.9
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 8.6e-200 701.4 569 68.5
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.3e-190 671.0 466 76.8
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 1.1e-189 667.9 822 46.1
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 7.6e-188 661.8 825 43.6
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 1.5e-175 620.9 411 77.6
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 6.5e-147 525.8 358 79.3
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 1.2e-145 521.5 832 37.9
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 3.6e-105 387.1 304 72.4
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 6.2e-105 386.3 304 72.0
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 5.6e-98 363.2 215 80.9
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.8e-96 358.2 194 91.8
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.3e-96 357.8 201 84.1
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 7.5e-95 352.8 224 79.9
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 4.9e-94 350.1 209 81.8
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 8.1e-89 332.8 256 68.0
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 3.4e-87 327.4 258 69.0
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 4.4e-87 327.0 197 79.7
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.9e-85 321.6 233 69.1
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.0e-59 234.6 144 78.5
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 3.1e-56 224.6 178 65.7
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 6.0e-52 210.3 163 66.9
ClCG03G011370 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.0e-46 193.0 111 82.9
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 1.3e-46 192.6 123 76.4
vmacro19968 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.7e-46 192.2 113 80.5
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 8.5e-38 163.3 109 75.2
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 8.5e-38 163.3 209 48.3
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 9.4e-37 159.8 126 79.4
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 4.7e-36 157.5 101 78.2
Cpa.g.sc51.35 Carica papaya HOM05D002281 ORTHO05D006774 1.3e-33 149.4 87 80.5
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 6.5e-22 110.5 167 40.1
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 2.1e-20 105.5 82 70.7
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 6.1e-20 104.0 87 58.6
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 2.0e-18 99.0 68 70.6
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 1.7e-17 95.9 59 84.7
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 1.8e-16 92.4 64 71.9
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.2e-15 89.7 65 70.8
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 4.5e-15 87.8 53 83.0
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 5.9e-15 87.4 72 61.1
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 5.9e-15 87.4 72 61.1
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 2.9e-14 85.1 50 82.0
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 2.7e-12 78.6 71 67.6
Cre12.g497350 Chlamydomonas reinhardtii HOM05D002281 ORTHO05D006774 2.2e-09 68.9 232 24.6
ClCG10G018100 Citrullus lanatus HOM05D006596 ORTHO05D008497 4.8e-09 67.8 223 26.5
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 1.4e-08 66.2 42 76.2
MELO3C009563.2 Cucumis melo HOM05D006596 ORTHO05D008497 1.4e-08 66.2 218 24.8
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 2.4e-08 65.5 49 69.4
Zm00001eb328630 Zea mays HOM05D000001 ORTHO05D000003 2.9e-06 58.5 223 25.6
TPR.G31597 Trifolium pratense HOM05D002281 ORTHO05D006774 6.6e-06 57.4 38 68.4

Acer truncatum (1 genes)
Actinidia chinensis (4 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (3 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (4 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (4 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (7 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings